muPPIt / muppit /environment.yaml
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name: udlm
channels:
- pytorch
- nvidia
- conda-forge
- bioconda
- defaults
- https://conda.rosettacommons.org
dependencies:
- _libgcc_mutex=0.1
- _openmp_mutex=4.5
- aom=3.9.1
- blas=1.0
- brotli-python=1.1.0
- bzip2=1.0.8
- ca-certificates=2024.12.14
- cairo=1.18.2
- certifi=2024.12.14
- cffi=1.17.1
- charset-normalizer=3.4.0
- cpython=3.10.16
- cuda-cudart=12.1.105
- cuda-cupti=12.1.105
- cuda-libraries=12.1.0
- cuda-nvrtc=12.1.105
- cuda-nvtx=12.1.105
- cuda-opencl=12.6.77
- cuda-runtime=12.1.0
- cuda-version=12.6
- dav1d=1.2.1
- ffmpeg=7.1.0
- filelock=3.16.1
- font-ttf-dejavu-sans-mono=2.37
- font-ttf-inconsolata=3.000
- font-ttf-source-code-pro=2.038
- font-ttf-ubuntu=0.83
- fontconfig=2.15.0
- fonts-conda-ecosystem=1
- fonts-conda-forge=1
- freetype=2.12.1
- fribidi=1.0.10
- gdk-pixbuf=2.42.12
- gmp=6.3.0
- gmpy2=2.1.5
- graphite2=1.3.13
- h2=4.1.0
- harfbuzz=10.1.0
- hpack=4.0.0
- hyperframe=6.0.1
- icu=75.1
- idna=3.10
- intel-openmp=2022.0.1
- jinja2=3.1.5
- lame=3.100
- lcms2=2.16
- ld_impl_linux-64=2.43
- lerc=4.0.0
- libabseil=20240722.0
- libass=0.17.3
- libblas=3.9.0
- libcblas=3.9.0
- libcublas=12.1.0.26
- libcufft=11.0.2.4
- libcufile=1.11.1.6
- libcurand=10.3.7.77
- libcusolver=11.4.4.55
- libcusparse=12.0.2.55
- libdeflate=1.23
- libdrm=2.4.124
- libegl=1.7.0
- libexpat=2.6.4
- libffi=3.4.2
- libgcc=14.2.0
- libgcc-ng=14.2.0
- libgl=1.7.0
- libglib=2.82.2
- libglvnd=1.7.0
- libglx=1.7.0
- libgomp=14.2.0
- libhwloc=2.11.2
- libiconv=1.17
- libjpeg-turbo=3.0.0
- liblapack=3.9.0
- liblzma=5.6.3
- libnpp=12.0.2.50
- libnsl=2.0.1
- libnvjitlink=12.1.105
- libnvjpeg=12.1.1.14
- libopenvino=2024.5.0
- libopenvino-auto-batch-plugin=2024.5.0
- libopenvino-auto-plugin=2024.5.0
- libopenvino-hetero-plugin=2024.5.0
- libopenvino-intel-cpu-plugin=2024.5.0
- libopenvino-intel-gpu-plugin=2024.5.0
- libopenvino-intel-npu-plugin=2024.5.0
- libopenvino-ir-frontend=2024.5.0
- libopenvino-onnx-frontend=2024.5.0
- libopenvino-paddle-frontend=2024.5.0
- libopenvino-pytorch-frontend=2024.5.0
- libopenvino-tensorflow-frontend=2024.5.0
- libopenvino-tensorflow-lite-frontend=2024.5.0
- libopus=1.3.1
- libpciaccess=0.18
- libpng=1.6.44
- libprotobuf=5.28.2
- librsvg=2.58.4
- libsqlite=3.47.2
- libstdcxx=14.2.0
- libstdcxx-ng=14.2.0
- libtiff=4.7.0
- libuuid=2.38.1
- libva=2.22.0
- libvpx=1.14.1
- libwebp-base=1.5.0
- libxcb=1.17.0
- libxcrypt=4.4.36
- libxml2=2.13.5
- libzlib=1.3.1
- llvm-openmp=15.0.7
- markupsafe=3.0.2
- mkl=2022.1.0
- mpc=1.3.1
- mpfr=4.2.1
- mpmath=1.3.0
- ncurses=6.5
- networkx=3.4.2
- ocl-icd=2.3.2
- opencl-headers=2024.10.24
- openh264=2.5.0
- openjpeg=2.5.3
- openssl=3.4.0
- pango=1.54.0
- pcre2=10.44
- pillow=11.0.0
- pip=24.3.1
- pixman=0.44.2
- pthread-stubs=0.4
- pugixml=1.14
- pycparser=2.22
- pysocks=1.7.1
- python=3.10.16
- python_abi=3.10
- pytorch=2.1.2
- pytorch-cuda=12.1
- pytorch-mutex=1.0
- pyyaml=6.0.2
- readline=8.2
- requests=2.32.3
- setuptools=75.6.0
- snappy=1.2.1
- svt-av1=2.3.0
- sympy=1.13.3
- tbb=2022.0.0
- tk=8.6.13
- torchaudio=2.1.2
- torchtriton=2.1.0
- torchvision=0.16.2
- typing_extensions=4.12.2
- urllib3=2.3.0
- wayland=1.23.1
- wayland-protocols=1.37
- wheel=0.45.1
- x264=1!164.3095
- x265=3.5
- xorg-libice=1.1.2
- xorg-libsm=1.2.5
- xorg-libx11=1.8.10
- xorg-libxau=1.0.12
- xorg-libxdmcp=1.1.5
- xorg-libxext=1.3.6
- xorg-libxfixes=6.0.1
- xorg-libxrender=0.9.12
- yaml=0.2.5
- zstandard=0.23.0
- zstd=1.5.6
- pip:
- aiohappyeyeballs==2.4.4
- aiohttp==3.11.11
- aiosignal==1.3.2
- annotated-types==0.7.0
- antlr4-python3-runtime==4.9.3
- anyio==4.7.0
- argon2-cffi==23.1.0
- argon2-cffi-bindings==21.2.0
- argparse==1.4.0
- arrow==1.3.0
- asttokens==3.0.0
- async-lru==2.0.4
- async-timeout==5.0.1
- attrs==24.3.0
- automat==24.8.1
- babel==2.16.0
- beautifulsoup4==4.12.3
- biopython==1.84
- bleach==6.2.0
- blessed==1.20.0
- buildtools==1.0.6
- causal-conv1d==1.1.1
- click==8.1.8
- comm==0.2.2
- constantly==23.10.4
- contourpy==1.3.1
- cycler==0.12.1
- datasets==3.2.0
- debugpy==1.8.11
- decorator==5.1.1
- defusedxml==0.7.1
- dill==0.3.8
- docker-pycreds==0.4.0
- docopt==0.6.2
- einops==0.8.0
- exceptiongroup==1.2.2
- executing==2.1.0
- fastjsonschema==2.21.1
- flash-attn==2.7.2.post1
- fonttools==4.55.3
- fqdn==1.5.1
- frozenlist==1.5.0
- fsspec==2024.9.0
- furl==2.1.3
- git-lfs==1.6
- gitdb==4.0.11
- gitpython==3.1.43
- gpustat==1.1.1
- greenlet==3.1.1
- h11==0.14.0
- h5py==3.12.1
- httpcore==1.0.7
- httpx==0.28.1
- huggingface-hub==0.27.0
- hydra-core==1.3.2
- hyperlink==21.0.0
- incremental==24.7.2
- ipdb==0.13.13
- ipykernel==6.29.5
- ipython==8.31.0
- ipywidgets==8.1.5
- isoduration==20.11.0
- jedi==0.19.2
- joblib==1.4.2
- json5==0.10.0
- jsonpointer==3.0.0
- jsonschema==4.23.0
- jsonschema-specifications==2024.10.1
- jupyter==1.1.1
- jupyter-client==8.6.3
- jupyter-console==6.6.3
- jupyter-core==5.7.2
- jupyter-events==0.11.0
- jupyter-lsp==2.2.5
- jupyter-server==2.15.0
- jupyter-server-terminals==0.5.3
- jupyterlab==4.3.4
- jupyterlab-pygments==0.3.0
- jupyterlab-server==2.27.3
- jupyterlab-widgets==3.0.13
- kiwisolver==1.4.8
- lightning==2.5.0.post0
- lightning-utilities==0.11.9
- mamba-ssm==1.2.0.post1
- markdown-it-py==3.0.0
- matplotlib==3.10.0
- matplotlib-inline==0.1.7
- mdurl==0.1.2
- mistune==3.0.2
- multidict==6.1.0
- multiprocess==0.70.16
- nbclient==0.10.2
- nbconvert==7.16.4
- nbformat==5.10.4
- nest-asyncio==1.6.0
- ninja==1.11.1.3
- notebook==7.3.2
- notebook-shim==0.2.4
- numpy==1.26.4
- nvidia-ml-py==12.560.30
- omegaconf==2.3.0
- orderedmultidict==1.0.1
- overrides==7.7.0
- packaging==24.2
- pandas==2.2.3
- pandocfilters==1.5.1
- parso==0.8.4
- pexpect==4.9.0
- platformdirs==4.3.6
- prometheus-client==0.21.1
- prompt-toolkit==3.0.48
- propcache==0.2.1
- protobuf==5.29.2
- psutil==6.1.1
- ptyprocess==0.7.0
- pure-eval==0.2.3
- pyarrow==18.1.0
- pydantic==2.10.4
- pydantic-core==2.27.2
- pygments==2.18.0
- pyparsing==3.2.0
- python-dateutil==2.9.0.post0
- python-json-logger==3.2.1
- pytorch-image-generation-metrics==0.6.1
- pytorch-lightning==2.5.0.post0
- pytz==2024.2
- pyzmq==26.2.0
- rdkit==2024.3.6
- redo==3.0.0
- referencing==0.35.1
- regex==2024.11.6
- rfc3339-validator==0.1.4
- rfc3986-validator==0.1.1
- rich==13.9.4
- rpds-py==0.22.3
- safetensors==0.4.5
- scikit-learn==1.6.0
- scipy==1.14.1
- seaborn==0.13.2
- send2trash==1.8.3
- sentencepiece==0.2.0
- sentry-sdk==2.19.2
- setproctitle==1.3.4
- simplejson==3.19.3
- six==1.17.0
- smmap==5.0.1
- sniffio==1.3.1
- soupsieve==2.6
- sqlalchemy==2.0.36
- stack-data==0.6.3
- terminado==0.18.1
- threadpoolctl==3.5.0
- timm==1.0.12
- tinycss2==1.4.0
- tokenizers==0.21.0
- tomli==2.2.1
- torchmetrics==1.6.1
- tornado==6.4.2
- tqdm==4.67.1
- traitlets==5.14.3
- transformers==4.47.1
- twisted==24.11.0
- types-python-dateutil==2.9.0.20241206
- tzdata==2024.2
- uri-template==1.3.0
- wandb==0.19.1
- wcwidth==0.2.13
- webcolors==24.11.1
- webencodings==0.5.1
- websocket-client==1.8.0
- widgetsnbextension==4.0.13
- xxhash==3.5.0
- yarl==1.18.3
- zope-interface==7.2
prefix: /home/tc415/anaconda3/envs/udlm