Dr. Jorge Abreu Vicente
commited on
Commit
·
fd70bae
1
Parent(s):
776154f
End of training
Browse files- .gitignore +1 -0
- config.json +37 -0
- pytorch_model.bin +3 -0
- runs/Aug10_15-37-51_d51d64310947/1660146033.6846733/events.out.tfevents.1660146033.d51d64310947.469.1 +3 -0
- runs/Aug10_15-37-51_d51d64310947/events.out.tfevents.1660146033.d51d64310947.469.0 +3 -0
- runs/Aug10_15-37-51_d51d64310947/losses_main_loss_eval/events.out.tfevents.1660146606.d51d64310947.469.5 +3 -0
- runs/Aug10_15-37-51_d51d64310947/losses_main_loss_train/events.out.tfevents.1660146043.d51d64310947.469.2 +3 -0
- runs/Aug10_15-37-51_d51d64310947/other_data_epoch_epoch/events.out.tfevents.1660146043.d51d64310947.469.4 +3 -0
- runs/Aug10_15-37-51_d51d64310947/other_data_eval_accuracy_score_eval_accuracy_score/events.out.tfevents.1660146606.d51d64310947.469.6 +3 -0
- runs/Aug10_15-37-51_d51d64310947/other_data_eval_f1_eval_f1/events.out.tfevents.1660146606.d51d64310947.469.9 +3 -0
- runs/Aug10_15-37-51_d51d64310947/other_data_eval_precision_eval_precision/events.out.tfevents.1660146606.d51d64310947.469.7 +3 -0
- runs/Aug10_15-37-51_d51d64310947/other_data_eval_recall_eval_recall/events.out.tfevents.1660146606.d51d64310947.469.8 +3 -0
- runs/Aug10_15-37-51_d51d64310947/other_data_eval_runtime_eval_runtime/events.out.tfevents.1660146606.d51d64310947.469.10 +3 -0
- runs/Aug10_15-37-51_d51d64310947/other_data_eval_samples_per_second_eval_samples_per_second/events.out.tfevents.1660146606.d51d64310947.469.11 +3 -0
- runs/Aug10_15-37-51_d51d64310947/other_data_eval_steps_per_second_eval_steps_per_second/events.out.tfevents.1660146606.d51d64310947.469.12 +3 -0
- runs/Aug10_15-37-51_d51d64310947/other_data_learning_rate_learning_rate/events.out.tfevents.1660146043.d51d64310947.469.3 +3 -0
- runs/Aug10_15-37-51_d51d64310947/other_data_train_loss_train_loss/events.out.tfevents.1660147183.d51d64310947.469.16 +3 -0
- runs/Aug10_15-37-51_d51d64310947/other_data_train_runtime_train_runtime/events.out.tfevents.1660147183.d51d64310947.469.13 +3 -0
- runs/Aug10_15-37-51_d51d64310947/other_data_train_samples_per_second_train_samples_per_second/events.out.tfevents.1660147183.d51d64310947.469.14 +3 -0
- runs/Aug10_15-37-51_d51d64310947/other_data_train_steps_per_second_train_steps_per_second/events.out.tfevents.1660147183.d51d64310947.469.15 +3 -0
- training_args.bin +3 -0
.gitignore
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checkpoint-*/
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config.json
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{
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"architectures": [
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"BertForTokenClassification"
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],
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"id2label": {
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},
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"initializer_range": 0.02,
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"label2id": {
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"O": 0
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"layer_norm_eps": 1e-12,
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"model_type": "bert",
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"num_attention_heads": 16,
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"num_hidden_layers": 24,
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"pad_token_id": 0,
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"position_embedding_type": "absolute",
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"torch_dtype": "float32",
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"transformers_version": "4.15.0",
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"type_vocab_size": 2,
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"use_cache": true,
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"vocab_size": 28895
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}
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