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license: apache-2.0
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## Sequence Ontology Node2Vec
This is a simple application of the Node2Vec approach to the Sequence Ontology graph for only ncRNA.
This allows us to calculate the similarity between SO types:
e.g. SO:0001877 (lncRNA) should be very similar to SO:0001463 (lincRNA) but very different to SO:0000651 (cytosolic_LSU_rRNA)
This SO type similarity model is used in our transcripts to genes modelling to compare the SO types of transcripts we are trying to group into genes. |