peacock-data-public-datasets-idc-cronscript
/
venv
/lib
/python3.10
/site-packages
/numpy
/f2py
/tests
/util.py
""" | |
Utility functions for | |
- building and importing modules on test time, using a temporary location | |
- detecting if compilers are present | |
- determining paths to tests | |
""" | |
import glob | |
import os | |
import sys | |
import subprocess | |
import tempfile | |
import shutil | |
import atexit | |
import textwrap | |
import re | |
import pytest | |
import contextlib | |
import numpy | |
from pathlib import Path | |
from numpy.compat import asstr | |
from numpy._utils import asunicode | |
from numpy.testing import temppath, IS_WASM | |
from importlib import import_module | |
# | |
# Maintaining a temporary module directory | |
# | |
_module_dir = None | |
_module_num = 5403 | |
if sys.platform == "cygwin": | |
NUMPY_INSTALL_ROOT = Path(__file__).parent.parent.parent | |
_module_list = list(NUMPY_INSTALL_ROOT.glob("**/*.dll")) | |
def _cleanup(): | |
global _module_dir | |
if _module_dir is not None: | |
try: | |
sys.path.remove(_module_dir) | |
except ValueError: | |
pass | |
try: | |
shutil.rmtree(_module_dir) | |
except OSError: | |
pass | |
_module_dir = None | |
def get_module_dir(): | |
global _module_dir | |
if _module_dir is None: | |
_module_dir = tempfile.mkdtemp() | |
atexit.register(_cleanup) | |
if _module_dir not in sys.path: | |
sys.path.insert(0, _module_dir) | |
return _module_dir | |
def get_temp_module_name(): | |
# Assume single-threaded, and the module dir usable only by this thread | |
global _module_num | |
get_module_dir() | |
name = "_test_ext_module_%d" % _module_num | |
_module_num += 1 | |
if name in sys.modules: | |
# this should not be possible, but check anyway | |
raise RuntimeError("Temporary module name already in use.") | |
return name | |
def _memoize(func): | |
memo = {} | |
def wrapper(*a, **kw): | |
key = repr((a, kw)) | |
if key not in memo: | |
try: | |
memo[key] = func(*a, **kw) | |
except Exception as e: | |
memo[key] = e | |
raise | |
ret = memo[key] | |
if isinstance(ret, Exception): | |
raise ret | |
return ret | |
wrapper.__name__ = func.__name__ | |
return wrapper | |
# | |
# Building modules | |
# | |
def build_module(source_files, options=[], skip=[], only=[], module_name=None): | |
""" | |
Compile and import a f2py module, built from the given files. | |
""" | |
code = f"import sys; sys.path = {sys.path!r}; import numpy.f2py; numpy.f2py.main()" | |
d = get_module_dir() | |
# Copy files | |
dst_sources = [] | |
f2py_sources = [] | |
for fn in source_files: | |
if not os.path.isfile(fn): | |
raise RuntimeError("%s is not a file" % fn) | |
dst = os.path.join(d, os.path.basename(fn)) | |
shutil.copyfile(fn, dst) | |
dst_sources.append(dst) | |
base, ext = os.path.splitext(dst) | |
if ext in (".f90", ".f", ".c", ".pyf"): | |
f2py_sources.append(dst) | |
assert f2py_sources | |
# Prepare options | |
if module_name is None: | |
module_name = get_temp_module_name() | |
f2py_opts = ["-c", "-m", module_name] + options + f2py_sources | |
if skip: | |
f2py_opts += ["skip:"] + skip | |
if only: | |
f2py_opts += ["only:"] + only | |
# Build | |
cwd = os.getcwd() | |
try: | |
os.chdir(d) | |
cmd = [sys.executable, "-c", code] + f2py_opts | |
p = subprocess.Popen(cmd, | |
stdout=subprocess.PIPE, | |
stderr=subprocess.STDOUT) | |
out, err = p.communicate() | |
if p.returncode != 0: | |
raise RuntimeError("Running f2py failed: %s\n%s" % | |
(cmd[4:], asunicode(out))) | |
finally: | |
os.chdir(cwd) | |
# Partial cleanup | |
for fn in dst_sources: | |
os.unlink(fn) | |
# Rebase (Cygwin-only) | |
if sys.platform == "cygwin": | |
# If someone starts deleting modules after import, this will | |
# need to change to record how big each module is, rather than | |
# relying on rebase being able to find that from the files. | |
_module_list.extend( | |
glob.glob(os.path.join(d, "{:s}*".format(module_name))) | |
) | |
subprocess.check_call( | |
["/usr/bin/rebase", "--database", "--oblivious", "--verbose"] | |
+ _module_list | |
) | |
# Import | |
return import_module(module_name) | |
def build_code(source_code, | |
options=[], | |
skip=[], | |
only=[], | |
suffix=None, | |
module_name=None): | |
""" | |
Compile and import Fortran code using f2py. | |
""" | |
if suffix is None: | |
suffix = ".f" | |
with temppath(suffix=suffix) as path: | |
with open(path, "w") as f: | |
f.write(source_code) | |
return build_module([path], | |
options=options, | |
skip=skip, | |
only=only, | |
module_name=module_name) | |
# | |
# Check if compilers are available at all... | |
# | |
_compiler_status = None | |
def _get_compiler_status(): | |
global _compiler_status | |
if _compiler_status is not None: | |
return _compiler_status | |
_compiler_status = (False, False, False) | |
if IS_WASM: | |
# Can't run compiler from inside WASM. | |
return _compiler_status | |
# XXX: this is really ugly. But I don't know how to invoke Distutils | |
# in a safer way... | |
code = textwrap.dedent(f"""\ | |
import os | |
import sys | |
sys.path = {repr(sys.path)} | |
def configuration(parent_name='',top_path=None): | |
global config | |
from numpy.distutils.misc_util import Configuration | |
config = Configuration('', parent_name, top_path) | |
return config | |
from numpy.distutils.core import setup | |
setup(configuration=configuration) | |
config_cmd = config.get_config_cmd() | |
have_c = config_cmd.try_compile('void foo() {{}}') | |
print('COMPILERS:%%d,%%d,%%d' %% (have_c, | |
config.have_f77c(), | |
config.have_f90c())) | |
sys.exit(99) | |
""") | |
code = code % dict(syspath=repr(sys.path)) | |
tmpdir = tempfile.mkdtemp() | |
try: | |
script = os.path.join(tmpdir, "setup.py") | |
with open(script, "w") as f: | |
f.write(code) | |
cmd = [sys.executable, "setup.py", "config"] | |
p = subprocess.Popen(cmd, | |
stdout=subprocess.PIPE, | |
stderr=subprocess.STDOUT, | |
cwd=tmpdir) | |
out, err = p.communicate() | |
finally: | |
shutil.rmtree(tmpdir) | |
m = re.search(br"COMPILERS:(\d+),(\d+),(\d+)", out) | |
if m: | |
_compiler_status = ( | |
bool(int(m.group(1))), | |
bool(int(m.group(2))), | |
bool(int(m.group(3))), | |
) | |
# Finished | |
return _compiler_status | |
def has_c_compiler(): | |
return _get_compiler_status()[0] | |
def has_f77_compiler(): | |
return _get_compiler_status()[1] | |
def has_f90_compiler(): | |
return _get_compiler_status()[2] | |
# | |
# Building with distutils | |
# | |
def build_module_distutils(source_files, config_code, module_name, **kw): | |
""" | |
Build a module via distutils and import it. | |
""" | |
d = get_module_dir() | |
# Copy files | |
dst_sources = [] | |
for fn in source_files: | |
if not os.path.isfile(fn): | |
raise RuntimeError("%s is not a file" % fn) | |
dst = os.path.join(d, os.path.basename(fn)) | |
shutil.copyfile(fn, dst) | |
dst_sources.append(dst) | |
# Build script | |
config_code = textwrap.dedent(config_code).replace("\n", "\n ") | |
code = fr""" | |
import os | |
import sys | |
sys.path = {repr(sys.path)} | |
def configuration(parent_name='',top_path=None): | |
from numpy.distutils.misc_util import Configuration | |
config = Configuration('', parent_name, top_path) | |
{config_code} | |
return config | |
if __name__ == "__main__": | |
from numpy.distutils.core import setup | |
setup(configuration=configuration) | |
""" | |
script = os.path.join(d, get_temp_module_name() + ".py") | |
dst_sources.append(script) | |
with open(script, "wb") as f: | |
f.write(code.encode('latin1')) | |
# Build | |
cwd = os.getcwd() | |
try: | |
os.chdir(d) | |
cmd = [sys.executable, script, "build_ext", "-i"] | |
p = subprocess.Popen(cmd, | |
stdout=subprocess.PIPE, | |
stderr=subprocess.STDOUT) | |
out, err = p.communicate() | |
if p.returncode != 0: | |
raise RuntimeError("Running distutils build failed: %s\n%s" % | |
(cmd[4:], asstr(out))) | |
finally: | |
os.chdir(cwd) | |
# Partial cleanup | |
for fn in dst_sources: | |
os.unlink(fn) | |
# Import | |
__import__(module_name) | |
return sys.modules[module_name] | |
# | |
# Unittest convenience | |
# | |
class F2PyTest: | |
code = None | |
sources = None | |
options = [] | |
skip = [] | |
only = [] | |
suffix = ".f" | |
module = None | |
def module_name(self): | |
cls = type(self) | |
return f'_{cls.__module__.rsplit(".",1)[-1]}_{cls.__name__}_ext_module' | |
def setup_method(self): | |
if sys.platform == "win32": | |
pytest.skip("Fails with MinGW64 Gfortran (Issue #9673)") | |
if self.module is not None: | |
return | |
# Check compiler availability first | |
if not has_c_compiler(): | |
pytest.skip("No C compiler available") | |
codes = [] | |
if self.sources: | |
codes.extend(self.sources) | |
if self.code is not None: | |
codes.append(self.suffix) | |
needs_f77 = False | |
needs_f90 = False | |
needs_pyf = False | |
for fn in codes: | |
if str(fn).endswith(".f"): | |
needs_f77 = True | |
elif str(fn).endswith(".f90"): | |
needs_f90 = True | |
elif str(fn).endswith(".pyf"): | |
needs_pyf = True | |
if needs_f77 and not has_f77_compiler(): | |
pytest.skip("No Fortran 77 compiler available") | |
if needs_f90 and not has_f90_compiler(): | |
pytest.skip("No Fortran 90 compiler available") | |
if needs_pyf and not (has_f90_compiler() or has_f77_compiler()): | |
pytest.skip("No Fortran compiler available") | |
# Build the module | |
if self.code is not None: | |
self.module = build_code( | |
self.code, | |
options=self.options, | |
skip=self.skip, | |
only=self.only, | |
suffix=self.suffix, | |
module_name=self.module_name, | |
) | |
if self.sources is not None: | |
self.module = build_module( | |
self.sources, | |
options=self.options, | |
skip=self.skip, | |
only=self.only, | |
module_name=self.module_name, | |
) | |
# | |
# Helper functions | |
# | |
def getpath(*a): | |
# Package root | |
d = Path(numpy.f2py.__file__).parent.resolve() | |
return d.joinpath(*a) | |
def switchdir(path): | |
curpath = Path.cwd() | |
os.chdir(path) | |
try: | |
yield | |
finally: | |
os.chdir(curpath) | |