peacock-data-public-datasets-idc-cronscript
/
venv
/lib
/python3.10
/site-packages
/numpy
/__init__.py
""" | |
NumPy | |
===== | |
Provides | |
1. An array object of arbitrary homogeneous items | |
2. Fast mathematical operations over arrays | |
3. Linear Algebra, Fourier Transforms, Random Number Generation | |
How to use the documentation | |
---------------------------- | |
Documentation is available in two forms: docstrings provided | |
with the code, and a loose standing reference guide, available from | |
`the NumPy homepage <https://numpy.org>`_. | |
We recommend exploring the docstrings using | |
`IPython <https://ipython.org>`_, an advanced Python shell with | |
TAB-completion and introspection capabilities. See below for further | |
instructions. | |
The docstring examples assume that `numpy` has been imported as ``np``:: | |
>>> import numpy as np | |
Code snippets are indicated by three greater-than signs:: | |
>>> x = 42 | |
>>> x = x + 1 | |
Use the built-in ``help`` function to view a function's docstring:: | |
>>> help(np.sort) | |
... # doctest: +SKIP | |
For some objects, ``np.info(obj)`` may provide additional help. This is | |
particularly true if you see the line "Help on ufunc object:" at the top | |
of the help() page. Ufuncs are implemented in C, not Python, for speed. | |
The native Python help() does not know how to view their help, but our | |
np.info() function does. | |
To search for documents containing a keyword, do:: | |
>>> np.lookfor('keyword') | |
... # doctest: +SKIP | |
General-purpose documents like a glossary and help on the basic concepts | |
of numpy are available under the ``doc`` sub-module:: | |
>>> from numpy import doc | |
>>> help(doc) | |
... # doctest: +SKIP | |
Available subpackages | |
--------------------- | |
lib | |
Basic functions used by several sub-packages. | |
random | |
Core Random Tools | |
linalg | |
Core Linear Algebra Tools | |
fft | |
Core FFT routines | |
polynomial | |
Polynomial tools | |
testing | |
NumPy testing tools | |
distutils | |
Enhancements to distutils with support for | |
Fortran compilers support and more (for Python <= 3.11). | |
Utilities | |
--------- | |
test | |
Run numpy unittests | |
show_config | |
Show numpy build configuration | |
matlib | |
Make everything matrices. | |
__version__ | |
NumPy version string | |
Viewing documentation using IPython | |
----------------------------------- | |
Start IPython and import `numpy` usually under the alias ``np``: `import | |
numpy as np`. Then, directly past or use the ``%cpaste`` magic to paste | |
examples into the shell. To see which functions are available in `numpy`, | |
type ``np.<TAB>`` (where ``<TAB>`` refers to the TAB key), or use | |
``np.*cos*?<ENTER>`` (where ``<ENTER>`` refers to the ENTER key) to narrow | |
down the list. To view the docstring for a function, use | |
``np.cos?<ENTER>`` (to view the docstring) and ``np.cos??<ENTER>`` (to view | |
the source code). | |
Copies vs. in-place operation | |
----------------------------- | |
Most of the functions in `numpy` return a copy of the array argument | |
(e.g., `np.sort`). In-place versions of these functions are often | |
available as array methods, i.e. ``x = np.array([1,2,3]); x.sort()``. | |
Exceptions to this rule are documented. | |
""" | |
import sys | |
import warnings | |
from ._globals import _NoValue, _CopyMode | |
# These exceptions were moved in 1.25 and are hidden from __dir__() | |
from .exceptions import ( | |
ComplexWarning, ModuleDeprecationWarning, VisibleDeprecationWarning, | |
TooHardError, AxisError) | |
# If a version with git hash was stored, use that instead | |
from . import version | |
from .version import __version__ | |
# We first need to detect if we're being called as part of the numpy setup | |
# procedure itself in a reliable manner. | |
try: | |
__NUMPY_SETUP__ | |
except NameError: | |
__NUMPY_SETUP__ = False | |
if __NUMPY_SETUP__: | |
sys.stderr.write('Running from numpy source directory.\n') | |
else: | |
# Allow distributors to run custom init code before importing numpy.core | |
from . import _distributor_init | |
try: | |
from numpy.__config__ import show as show_config | |
except ImportError as e: | |
msg = """Error importing numpy: you should not try to import numpy from | |
its source directory; please exit the numpy source tree, and relaunch | |
your python interpreter from there.""" | |
raise ImportError(msg) from e | |
__all__ = [ | |
'exceptions', 'ModuleDeprecationWarning', 'VisibleDeprecationWarning', | |
'ComplexWarning', 'TooHardError', 'AxisError'] | |
# mapping of {name: (value, deprecation_msg)} | |
__deprecated_attrs__ = {} | |
from . import core | |
from .core import * | |
from . import compat | |
from . import exceptions | |
from . import dtypes | |
from . import lib | |
# NOTE: to be revisited following future namespace cleanup. | |
# See gh-14454 and gh-15672 for discussion. | |
from .lib import * | |
from . import linalg | |
from . import fft | |
from . import polynomial | |
from . import random | |
from . import ctypeslib | |
from . import ma | |
from . import matrixlib as _mat | |
from .matrixlib import * | |
# Deprecations introduced in NumPy 1.20.0, 2020-06-06 | |
import builtins as _builtins | |
_msg = ( | |
"module 'numpy' has no attribute '{n}'.\n" | |
"`np.{n}` was a deprecated alias for the builtin `{n}`. " | |
"To avoid this error in existing code, use `{n}` by itself. " | |
"Doing this will not modify any behavior and is safe. {extended_msg}\n" | |
"The aliases was originally deprecated in NumPy 1.20; for more " | |
"details and guidance see the original release note at:\n" | |
" https://numpy.org/devdocs/release/1.20.0-notes.html#deprecations") | |
_specific_msg = ( | |
"If you specifically wanted the numpy scalar type, use `np.{}` here.") | |
_int_extended_msg = ( | |
"When replacing `np.{}`, you may wish to use e.g. `np.int64` " | |
"or `np.int32` to specify the precision. If you wish to review " | |
"your current use, check the release note link for " | |
"additional information.") | |
_type_info = [ | |
("object", ""), # The NumPy scalar only exists by name. | |
("bool", _specific_msg.format("bool_")), | |
("float", _specific_msg.format("float64")), | |
("complex", _specific_msg.format("complex128")), | |
("str", _specific_msg.format("str_")), | |
("int", _int_extended_msg.format("int"))] | |
__former_attrs__ = { | |
n: _msg.format(n=n, extended_msg=extended_msg) | |
for n, extended_msg in _type_info | |
} | |
# Future warning introduced in NumPy 1.24.0, 2022-11-17 | |
_msg = ( | |
"`np.{n}` is a deprecated alias for `{an}`. (Deprecated NumPy 1.24)") | |
# Some of these are awkward (since `np.str` may be preferable in the long | |
# term), but overall the names ending in 0 seem undesirable | |
_type_info = [ | |
("bool8", bool_, "np.bool_"), | |
("int0", intp, "np.intp"), | |
("uint0", uintp, "np.uintp"), | |
("str0", str_, "np.str_"), | |
("bytes0", bytes_, "np.bytes_"), | |
("void0", void, "np.void"), | |
("object0", object_, | |
"`np.object0` is a deprecated alias for `np.object_`. " | |
"`object` can be used instead. (Deprecated NumPy 1.24)")] | |
# Some of these could be defined right away, but most were aliases to | |
# the Python objects and only removed in NumPy 1.24. Defining them should | |
# probably wait for NumPy 1.26 or 2.0. | |
# When defined, these should possibly not be added to `__all__` to avoid | |
# import with `from numpy import *`. | |
__future_scalars__ = {"bool", "long", "ulong", "str", "bytes", "object"} | |
__deprecated_attrs__.update({ | |
n: (alias, _msg.format(n=n, an=an)) for n, alias, an in _type_info}) | |
import math | |
__deprecated_attrs__['math'] = (math, | |
"`np.math` is a deprecated alias for the standard library `math` " | |
"module (Deprecated Numpy 1.25). Replace usages of `np.math` with " | |
"`math`") | |
del math, _msg, _type_info | |
from .core import abs | |
# now that numpy modules are imported, can initialize limits | |
core.getlimits._register_known_types() | |
__all__.extend(['__version__', 'show_config']) | |
__all__.extend(core.__all__) | |
__all__.extend(_mat.__all__) | |
__all__.extend(lib.__all__) | |
__all__.extend(['linalg', 'fft', 'random', 'ctypeslib', 'ma']) | |
# Remove min and max from __all__ to avoid `from numpy import *` override | |
# the builtins min/max. Temporary fix for 1.25.x/1.26.x, see gh-24229. | |
__all__.remove('min') | |
__all__.remove('max') | |
__all__.remove('round') | |
# Remove one of the two occurrences of `issubdtype`, which is exposed as | |
# both `numpy.core.issubdtype` and `numpy.lib.issubdtype`. | |
__all__.remove('issubdtype') | |
# These are exported by np.core, but are replaced by the builtins below | |
# remove them to ensure that we don't end up with `np.long == np.int_`, | |
# which would be a breaking change. | |
del long, unicode | |
__all__.remove('long') | |
__all__.remove('unicode') | |
# Remove things that are in the numpy.lib but not in the numpy namespace | |
# Note that there is a test (numpy/tests/test_public_api.py:test_numpy_namespace) | |
# that prevents adding more things to the main namespace by accident. | |
# The list below will grow until the `from .lib import *` fixme above is | |
# taken care of | |
__all__.remove('Arrayterator') | |
del Arrayterator | |
# These names were removed in NumPy 1.20. For at least one release, | |
# attempts to access these names in the numpy namespace will trigger | |
# a warning, and calling the function will raise an exception. | |
_financial_names = ['fv', 'ipmt', 'irr', 'mirr', 'nper', 'npv', 'pmt', | |
'ppmt', 'pv', 'rate'] | |
__expired_functions__ = { | |
name: (f'In accordance with NEP 32, the function {name} was removed ' | |
'from NumPy version 1.20. A replacement for this function ' | |
'is available in the numpy_financial library: ' | |
'https://pypi.org/project/numpy-financial') | |
for name in _financial_names} | |
# Filter out Cython harmless warnings | |
warnings.filterwarnings("ignore", message="numpy.dtype size changed") | |
warnings.filterwarnings("ignore", message="numpy.ufunc size changed") | |
warnings.filterwarnings("ignore", message="numpy.ndarray size changed") | |
# oldnumeric and numarray were removed in 1.9. In case some packages import | |
# but do not use them, we define them here for backward compatibility. | |
oldnumeric = 'removed' | |
numarray = 'removed' | |
def __getattr__(attr): | |
# Warn for expired attributes, and return a dummy function | |
# that always raises an exception. | |
import warnings | |
import math | |
try: | |
msg = __expired_functions__[attr] | |
except KeyError: | |
pass | |
else: | |
warnings.warn(msg, DeprecationWarning, stacklevel=2) | |
def _expired(*args, **kwds): | |
raise RuntimeError(msg) | |
return _expired | |
# Emit warnings for deprecated attributes | |
try: | |
val, msg = __deprecated_attrs__[attr] | |
except KeyError: | |
pass | |
else: | |
warnings.warn(msg, DeprecationWarning, stacklevel=2) | |
return val | |
if attr in __future_scalars__: | |
# And future warnings for those that will change, but also give | |
# the AttributeError | |
warnings.warn( | |
f"In the future `np.{attr}` will be defined as the " | |
"corresponding NumPy scalar.", FutureWarning, stacklevel=2) | |
if attr in __former_attrs__: | |
raise AttributeError(__former_attrs__[attr]) | |
if attr == 'testing': | |
import numpy.testing as testing | |
return testing | |
elif attr == 'Tester': | |
"Removed in NumPy 1.25.0" | |
raise RuntimeError("Tester was removed in NumPy 1.25.") | |
raise AttributeError("module {!r} has no attribute " | |
"{!r}".format(__name__, attr)) | |
def __dir__(): | |
public_symbols = globals().keys() | {'testing'} | |
public_symbols -= { | |
"core", "matrixlib", | |
# These were moved in 1.25 and may be deprecated eventually: | |
"ModuleDeprecationWarning", "VisibleDeprecationWarning", | |
"ComplexWarning", "TooHardError", "AxisError" | |
} | |
return list(public_symbols) | |
# Pytest testing | |
from numpy._pytesttester import PytestTester | |
test = PytestTester(__name__) | |
del PytestTester | |
def _sanity_check(): | |
""" | |
Quick sanity checks for common bugs caused by environment. | |
There are some cases e.g. with wrong BLAS ABI that cause wrong | |
results under specific runtime conditions that are not necessarily | |
achieved during test suite runs, and it is useful to catch those early. | |
See https://github.com/numpy/numpy/issues/8577 and other | |
similar bug reports. | |
""" | |
try: | |
x = ones(2, dtype=float32) | |
if not abs(x.dot(x) - float32(2.0)) < 1e-5: | |
raise AssertionError() | |
except AssertionError: | |
msg = ("The current Numpy installation ({!r}) fails to " | |
"pass simple sanity checks. This can be caused for example " | |
"by incorrect BLAS library being linked in, or by mixing " | |
"package managers (pip, conda, apt, ...). Search closed " | |
"numpy issues for similar problems.") | |
raise RuntimeError(msg.format(__file__)) from None | |
_sanity_check() | |
del _sanity_check | |
def _mac_os_check(): | |
""" | |
Quick Sanity check for Mac OS look for accelerate build bugs. | |
Testing numpy polyfit calls init_dgelsd(LAPACK) | |
""" | |
try: | |
c = array([3., 2., 1.]) | |
x = linspace(0, 2, 5) | |
y = polyval(c, x) | |
_ = polyfit(x, y, 2, cov=True) | |
except ValueError: | |
pass | |
if sys.platform == "darwin": | |
from . import exceptions | |
with warnings.catch_warnings(record=True) as w: | |
_mac_os_check() | |
# Throw runtime error, if the test failed Check for warning and error_message | |
if len(w) > 0: | |
for _wn in w: | |
if _wn.category is exceptions.RankWarning: | |
# Ignore other warnings, they may not be relevant (see gh-25433). | |
error_message = f"{_wn.category.__name__}: {str(_wn.message)}" | |
msg = ( | |
"Polyfit sanity test emitted a warning, most likely due " | |
"to using a buggy Accelerate backend." | |
"\nIf you compiled yourself, more information is available at:" | |
"\nhttps://numpy.org/devdocs/building/index.html" | |
"\nOtherwise report this to the vendor " | |
"that provided NumPy.\n\n{}\n".format(error_message)) | |
raise RuntimeError(msg) | |
del _wn | |
del w | |
del _mac_os_check | |
# We usually use madvise hugepages support, but on some old kernels it | |
# is slow and thus better avoided. | |
# Specifically kernel version 4.6 had a bug fix which probably fixed this: | |
# https://github.com/torvalds/linux/commit/7cf91a98e607c2f935dbcc177d70011e95b8faff | |
import os | |
use_hugepage = os.environ.get("NUMPY_MADVISE_HUGEPAGE", None) | |
if sys.platform == "linux" and use_hugepage is None: | |
# If there is an issue with parsing the kernel version, | |
# set use_hugepages to 0. Usage of LooseVersion will handle | |
# the kernel version parsing better, but avoided since it | |
# will increase the import time. See: #16679 for related discussion. | |
try: | |
use_hugepage = 1 | |
kernel_version = os.uname().release.split(".")[:2] | |
kernel_version = tuple(int(v) for v in kernel_version) | |
if kernel_version < (4, 6): | |
use_hugepage = 0 | |
except ValueError: | |
use_hugepages = 0 | |
elif use_hugepage is None: | |
# This is not Linux, so it should not matter, just enable anyway | |
use_hugepage = 1 | |
else: | |
use_hugepage = int(use_hugepage) | |
# Note that this will currently only make a difference on Linux | |
core.multiarray._set_madvise_hugepage(use_hugepage) | |
del use_hugepage | |
# Give a warning if NumPy is reloaded or imported on a sub-interpreter | |
# We do this from python, since the C-module may not be reloaded and | |
# it is tidier organized. | |
core.multiarray._multiarray_umath._reload_guard() | |
# default to "weak" promotion for "NumPy 2". | |
core._set_promotion_state( | |
os.environ.get("NPY_PROMOTION_STATE", | |
"weak" if _using_numpy2_behavior() else "legacy")) | |
# Tell PyInstaller where to find hook-numpy.py | |
def _pyinstaller_hooks_dir(): | |
from pathlib import Path | |
return [str(Path(__file__).with_name("_pyinstaller").resolve())] | |
# Remove symbols imported for internal use | |
del os | |
# Remove symbols imported for internal use | |
del sys, warnings | |