peacock-data-public-datasets-idc-cronscript
/
venv
/lib
/python3.10
/site-packages
/numpy
/f2py
/tests
/util.py
| """ | |
| Utility functions for | |
| - building and importing modules on test time, using a temporary location | |
| - detecting if compilers are present | |
| - determining paths to tests | |
| """ | |
| import glob | |
| import os | |
| import sys | |
| import subprocess | |
| import tempfile | |
| import shutil | |
| import atexit | |
| import textwrap | |
| import re | |
| import pytest | |
| import contextlib | |
| import numpy | |
| from pathlib import Path | |
| from numpy.compat import asstr | |
| from numpy._utils import asunicode | |
| from numpy.testing import temppath, IS_WASM | |
| from importlib import import_module | |
| # | |
| # Maintaining a temporary module directory | |
| # | |
| _module_dir = None | |
| _module_num = 5403 | |
| if sys.platform == "cygwin": | |
| NUMPY_INSTALL_ROOT = Path(__file__).parent.parent.parent | |
| _module_list = list(NUMPY_INSTALL_ROOT.glob("**/*.dll")) | |
| def _cleanup(): | |
| global _module_dir | |
| if _module_dir is not None: | |
| try: | |
| sys.path.remove(_module_dir) | |
| except ValueError: | |
| pass | |
| try: | |
| shutil.rmtree(_module_dir) | |
| except OSError: | |
| pass | |
| _module_dir = None | |
| def get_module_dir(): | |
| global _module_dir | |
| if _module_dir is None: | |
| _module_dir = tempfile.mkdtemp() | |
| atexit.register(_cleanup) | |
| if _module_dir not in sys.path: | |
| sys.path.insert(0, _module_dir) | |
| return _module_dir | |
| def get_temp_module_name(): | |
| # Assume single-threaded, and the module dir usable only by this thread | |
| global _module_num | |
| get_module_dir() | |
| name = "_test_ext_module_%d" % _module_num | |
| _module_num += 1 | |
| if name in sys.modules: | |
| # this should not be possible, but check anyway | |
| raise RuntimeError("Temporary module name already in use.") | |
| return name | |
| def _memoize(func): | |
| memo = {} | |
| def wrapper(*a, **kw): | |
| key = repr((a, kw)) | |
| if key not in memo: | |
| try: | |
| memo[key] = func(*a, **kw) | |
| except Exception as e: | |
| memo[key] = e | |
| raise | |
| ret = memo[key] | |
| if isinstance(ret, Exception): | |
| raise ret | |
| return ret | |
| wrapper.__name__ = func.__name__ | |
| return wrapper | |
| # | |
| # Building modules | |
| # | |
| def build_module(source_files, options=[], skip=[], only=[], module_name=None): | |
| """ | |
| Compile and import a f2py module, built from the given files. | |
| """ | |
| code = f"import sys; sys.path = {sys.path!r}; import numpy.f2py; numpy.f2py.main()" | |
| d = get_module_dir() | |
| # Copy files | |
| dst_sources = [] | |
| f2py_sources = [] | |
| for fn in source_files: | |
| if not os.path.isfile(fn): | |
| raise RuntimeError("%s is not a file" % fn) | |
| dst = os.path.join(d, os.path.basename(fn)) | |
| shutil.copyfile(fn, dst) | |
| dst_sources.append(dst) | |
| base, ext = os.path.splitext(dst) | |
| if ext in (".f90", ".f", ".c", ".pyf"): | |
| f2py_sources.append(dst) | |
| assert f2py_sources | |
| # Prepare options | |
| if module_name is None: | |
| module_name = get_temp_module_name() | |
| f2py_opts = ["-c", "-m", module_name] + options + f2py_sources | |
| if skip: | |
| f2py_opts += ["skip:"] + skip | |
| if only: | |
| f2py_opts += ["only:"] + only | |
| # Build | |
| cwd = os.getcwd() | |
| try: | |
| os.chdir(d) | |
| cmd = [sys.executable, "-c", code] + f2py_opts | |
| p = subprocess.Popen(cmd, | |
| stdout=subprocess.PIPE, | |
| stderr=subprocess.STDOUT) | |
| out, err = p.communicate() | |
| if p.returncode != 0: | |
| raise RuntimeError("Running f2py failed: %s\n%s" % | |
| (cmd[4:], asunicode(out))) | |
| finally: | |
| os.chdir(cwd) | |
| # Partial cleanup | |
| for fn in dst_sources: | |
| os.unlink(fn) | |
| # Rebase (Cygwin-only) | |
| if sys.platform == "cygwin": | |
| # If someone starts deleting modules after import, this will | |
| # need to change to record how big each module is, rather than | |
| # relying on rebase being able to find that from the files. | |
| _module_list.extend( | |
| glob.glob(os.path.join(d, "{:s}*".format(module_name))) | |
| ) | |
| subprocess.check_call( | |
| ["/usr/bin/rebase", "--database", "--oblivious", "--verbose"] | |
| + _module_list | |
| ) | |
| # Import | |
| return import_module(module_name) | |
| def build_code(source_code, | |
| options=[], | |
| skip=[], | |
| only=[], | |
| suffix=None, | |
| module_name=None): | |
| """ | |
| Compile and import Fortran code using f2py. | |
| """ | |
| if suffix is None: | |
| suffix = ".f" | |
| with temppath(suffix=suffix) as path: | |
| with open(path, "w") as f: | |
| f.write(source_code) | |
| return build_module([path], | |
| options=options, | |
| skip=skip, | |
| only=only, | |
| module_name=module_name) | |
| # | |
| # Check if compilers are available at all... | |
| # | |
| _compiler_status = None | |
| def _get_compiler_status(): | |
| global _compiler_status | |
| if _compiler_status is not None: | |
| return _compiler_status | |
| _compiler_status = (False, False, False) | |
| if IS_WASM: | |
| # Can't run compiler from inside WASM. | |
| return _compiler_status | |
| # XXX: this is really ugly. But I don't know how to invoke Distutils | |
| # in a safer way... | |
| code = textwrap.dedent(f"""\ | |
| import os | |
| import sys | |
| sys.path = {repr(sys.path)} | |
| def configuration(parent_name='',top_path=None): | |
| global config | |
| from numpy.distutils.misc_util import Configuration | |
| config = Configuration('', parent_name, top_path) | |
| return config | |
| from numpy.distutils.core import setup | |
| setup(configuration=configuration) | |
| config_cmd = config.get_config_cmd() | |
| have_c = config_cmd.try_compile('void foo() {{}}') | |
| print('COMPILERS:%%d,%%d,%%d' %% (have_c, | |
| config.have_f77c(), | |
| config.have_f90c())) | |
| sys.exit(99) | |
| """) | |
| code = code % dict(syspath=repr(sys.path)) | |
| tmpdir = tempfile.mkdtemp() | |
| try: | |
| script = os.path.join(tmpdir, "setup.py") | |
| with open(script, "w") as f: | |
| f.write(code) | |
| cmd = [sys.executable, "setup.py", "config"] | |
| p = subprocess.Popen(cmd, | |
| stdout=subprocess.PIPE, | |
| stderr=subprocess.STDOUT, | |
| cwd=tmpdir) | |
| out, err = p.communicate() | |
| finally: | |
| shutil.rmtree(tmpdir) | |
| m = re.search(br"COMPILERS:(\d+),(\d+),(\d+)", out) | |
| if m: | |
| _compiler_status = ( | |
| bool(int(m.group(1))), | |
| bool(int(m.group(2))), | |
| bool(int(m.group(3))), | |
| ) | |
| # Finished | |
| return _compiler_status | |
| def has_c_compiler(): | |
| return _get_compiler_status()[0] | |
| def has_f77_compiler(): | |
| return _get_compiler_status()[1] | |
| def has_f90_compiler(): | |
| return _get_compiler_status()[2] | |
| # | |
| # Building with distutils | |
| # | |
| def build_module_distutils(source_files, config_code, module_name, **kw): | |
| """ | |
| Build a module via distutils and import it. | |
| """ | |
| d = get_module_dir() | |
| # Copy files | |
| dst_sources = [] | |
| for fn in source_files: | |
| if not os.path.isfile(fn): | |
| raise RuntimeError("%s is not a file" % fn) | |
| dst = os.path.join(d, os.path.basename(fn)) | |
| shutil.copyfile(fn, dst) | |
| dst_sources.append(dst) | |
| # Build script | |
| config_code = textwrap.dedent(config_code).replace("\n", "\n ") | |
| code = fr""" | |
| import os | |
| import sys | |
| sys.path = {repr(sys.path)} | |
| def configuration(parent_name='',top_path=None): | |
| from numpy.distutils.misc_util import Configuration | |
| config = Configuration('', parent_name, top_path) | |
| {config_code} | |
| return config | |
| if __name__ == "__main__": | |
| from numpy.distutils.core import setup | |
| setup(configuration=configuration) | |
| """ | |
| script = os.path.join(d, get_temp_module_name() + ".py") | |
| dst_sources.append(script) | |
| with open(script, "wb") as f: | |
| f.write(code.encode('latin1')) | |
| # Build | |
| cwd = os.getcwd() | |
| try: | |
| os.chdir(d) | |
| cmd = [sys.executable, script, "build_ext", "-i"] | |
| p = subprocess.Popen(cmd, | |
| stdout=subprocess.PIPE, | |
| stderr=subprocess.STDOUT) | |
| out, err = p.communicate() | |
| if p.returncode != 0: | |
| raise RuntimeError("Running distutils build failed: %s\n%s" % | |
| (cmd[4:], asstr(out))) | |
| finally: | |
| os.chdir(cwd) | |
| # Partial cleanup | |
| for fn in dst_sources: | |
| os.unlink(fn) | |
| # Import | |
| __import__(module_name) | |
| return sys.modules[module_name] | |
| # | |
| # Unittest convenience | |
| # | |
| class F2PyTest: | |
| code = None | |
| sources = None | |
| options = [] | |
| skip = [] | |
| only = [] | |
| suffix = ".f" | |
| module = None | |
| def module_name(self): | |
| cls = type(self) | |
| return f'_{cls.__module__.rsplit(".",1)[-1]}_{cls.__name__}_ext_module' | |
| def setup_method(self): | |
| if sys.platform == "win32": | |
| pytest.skip("Fails with MinGW64 Gfortran (Issue #9673)") | |
| if self.module is not None: | |
| return | |
| # Check compiler availability first | |
| if not has_c_compiler(): | |
| pytest.skip("No C compiler available") | |
| codes = [] | |
| if self.sources: | |
| codes.extend(self.sources) | |
| if self.code is not None: | |
| codes.append(self.suffix) | |
| needs_f77 = False | |
| needs_f90 = False | |
| needs_pyf = False | |
| for fn in codes: | |
| if str(fn).endswith(".f"): | |
| needs_f77 = True | |
| elif str(fn).endswith(".f90"): | |
| needs_f90 = True | |
| elif str(fn).endswith(".pyf"): | |
| needs_pyf = True | |
| if needs_f77 and not has_f77_compiler(): | |
| pytest.skip("No Fortran 77 compiler available") | |
| if needs_f90 and not has_f90_compiler(): | |
| pytest.skip("No Fortran 90 compiler available") | |
| if needs_pyf and not (has_f90_compiler() or has_f77_compiler()): | |
| pytest.skip("No Fortran compiler available") | |
| # Build the module | |
| if self.code is not None: | |
| self.module = build_code( | |
| self.code, | |
| options=self.options, | |
| skip=self.skip, | |
| only=self.only, | |
| suffix=self.suffix, | |
| module_name=self.module_name, | |
| ) | |
| if self.sources is not None: | |
| self.module = build_module( | |
| self.sources, | |
| options=self.options, | |
| skip=self.skip, | |
| only=self.only, | |
| module_name=self.module_name, | |
| ) | |
| # | |
| # Helper functions | |
| # | |
| def getpath(*a): | |
| # Package root | |
| d = Path(numpy.f2py.__file__).parent.resolve() | |
| return d.joinpath(*a) | |
| def switchdir(path): | |
| curpath = Path.cwd() | |
| os.chdir(path) | |
| try: | |
| yield | |
| finally: | |
| os.chdir(curpath) | |