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- ckpts/llama-3b/global_step100/bf16_zero_pp_rank_154_mp_rank_02_optim_states.pt +3 -0
- ckpts/llama-3b/global_step100/bf16_zero_pp_rank_21_mp_rank_00_optim_states.pt +3 -0
- ckpts/llama-3b/global_step100/bf16_zero_pp_rank_239_mp_rank_02_optim_states.pt +3 -0
- ckpts/llama-3b/global_step100/bf16_zero_pp_rank_78_mp_rank_00_optim_states.pt +3 -0
- ckpts/llama-3b/global_step100/bf16_zero_pp_rank_92_mp_rank_01_optim_states.pt +3 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/__pycache__/conftest.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/__pycache__/test_at.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/__pycache__/test_categorical.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/__pycache__/test_chaining_and_caching.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/__pycache__/test_coercion.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/__pycache__/test_floats.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/__pycache__/test_iat.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/__pycache__/test_iloc.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/__pycache__/test_indexing.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/__pycache__/test_loc.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/__pycache__/test_na_indexing.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/__pycache__/test_partial.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/interval/__init__.py +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/interval/test_interval.py +227 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/multiindex/__pycache__/test_multiindex.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/indexing/multiindex/__pycache__/test_slice.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/internals/__init__.py +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/internals/__pycache__/__init__.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/internals/__pycache__/test_api.cpython-310.pyc +0 -0
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- venv/lib/python3.10/site-packages/pandas/tests/internals/test_api.py +86 -0
- venv/lib/python3.10/site-packages/pandas/tests/internals/test_internals.py +1422 -0
- venv/lib/python3.10/site-packages/pandas/tests/internals/test_managers.py +103 -0
- venv/lib/python3.10/site-packages/pandas/tests/series/__init__.py +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/__init__.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_api.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_arithmetic.cpython-310.pyc +0 -0
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- venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_npfuncs.cpython-310.pyc +0 -0
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- venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_ufunc.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_unary.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_validate.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/series/accessors/__init__.py +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/series/accessors/__pycache__/__init__.cpython-310.pyc +0 -0
- venv/lib/python3.10/site-packages/pandas/tests/series/accessors/__pycache__/test_cat_accessor.cpython-310.pyc +0 -0
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- venv/lib/python3.10/site-packages/pandas/tests/series/accessors/__pycache__/test_sparse_accessor.cpython-310.pyc +0 -0
ckpts/llama-3b/global_step100/bf16_zero_pp_rank_154_mp_rank_02_optim_states.pt
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ckpts/llama-3b/global_step100/bf16_zero_pp_rank_92_mp_rank_01_optim_states.pt
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venv/lib/python3.10/site-packages/pandas/tests/indexing/__pycache__/test_na_indexing.cpython-310.pyc
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venv/lib/python3.10/site-packages/pandas/tests/indexing/interval/__init__.py
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venv/lib/python3.10/site-packages/pandas/tests/indexing/interval/test_interval.py
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import numpy as np
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2 |
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import pytest
|
3 |
+
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4 |
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from pandas._libs import index as libindex
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5 |
+
from pandas.compat import IS64
|
6 |
+
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7 |
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import pandas as pd
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8 |
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from pandas import (
|
9 |
+
DataFrame,
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10 |
+
IntervalIndex,
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11 |
+
Series,
|
12 |
+
)
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13 |
+
import pandas._testing as tm
|
14 |
+
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15 |
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16 |
+
class TestIntervalIndex:
|
17 |
+
@pytest.fixture
|
18 |
+
def series_with_interval_index(self):
|
19 |
+
return Series(np.arange(5), IntervalIndex.from_breaks(np.arange(6)))
|
20 |
+
|
21 |
+
def test_getitem_with_scalar(self, series_with_interval_index, indexer_sl):
|
22 |
+
ser = series_with_interval_index.copy()
|
23 |
+
|
24 |
+
expected = ser.iloc[:3]
|
25 |
+
tm.assert_series_equal(expected, indexer_sl(ser)[:3])
|
26 |
+
tm.assert_series_equal(expected, indexer_sl(ser)[:2.5])
|
27 |
+
tm.assert_series_equal(expected, indexer_sl(ser)[0.1:2.5])
|
28 |
+
if indexer_sl is tm.loc:
|
29 |
+
tm.assert_series_equal(expected, ser.loc[-1:3])
|
30 |
+
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31 |
+
expected = ser.iloc[1:4]
|
32 |
+
tm.assert_series_equal(expected, indexer_sl(ser)[[1.5, 2.5, 3.5]])
|
33 |
+
tm.assert_series_equal(expected, indexer_sl(ser)[[2, 3, 4]])
|
34 |
+
tm.assert_series_equal(expected, indexer_sl(ser)[[1.5, 3, 4]])
|
35 |
+
|
36 |
+
expected = ser.iloc[2:5]
|
37 |
+
tm.assert_series_equal(expected, indexer_sl(ser)[ser >= 2])
|
38 |
+
|
39 |
+
@pytest.mark.parametrize("direction", ["increasing", "decreasing"])
|
40 |
+
def test_getitem_nonoverlapping_monotonic(self, direction, closed, indexer_sl):
|
41 |
+
tpls = [(0, 1), (2, 3), (4, 5)]
|
42 |
+
if direction == "decreasing":
|
43 |
+
tpls = tpls[::-1]
|
44 |
+
|
45 |
+
idx = IntervalIndex.from_tuples(tpls, closed=closed)
|
46 |
+
ser = Series(list("abc"), idx)
|
47 |
+
|
48 |
+
for key, expected in zip(idx.left, ser):
|
49 |
+
if idx.closed_left:
|
50 |
+
assert indexer_sl(ser)[key] == expected
|
51 |
+
else:
|
52 |
+
with pytest.raises(KeyError, match=str(key)):
|
53 |
+
indexer_sl(ser)[key]
|
54 |
+
|
55 |
+
for key, expected in zip(idx.right, ser):
|
56 |
+
if idx.closed_right:
|
57 |
+
assert indexer_sl(ser)[key] == expected
|
58 |
+
else:
|
59 |
+
with pytest.raises(KeyError, match=str(key)):
|
60 |
+
indexer_sl(ser)[key]
|
61 |
+
|
62 |
+
for key, expected in zip(idx.mid, ser):
|
63 |
+
assert indexer_sl(ser)[key] == expected
|
64 |
+
|
65 |
+
def test_getitem_non_matching(self, series_with_interval_index, indexer_sl):
|
66 |
+
ser = series_with_interval_index.copy()
|
67 |
+
|
68 |
+
# this is a departure from our current
|
69 |
+
# indexing scheme, but simpler
|
70 |
+
with pytest.raises(KeyError, match=r"\[-1\] not in index"):
|
71 |
+
indexer_sl(ser)[[-1, 3, 4, 5]]
|
72 |
+
|
73 |
+
with pytest.raises(KeyError, match=r"\[-1\] not in index"):
|
74 |
+
indexer_sl(ser)[[-1, 3]]
|
75 |
+
|
76 |
+
def test_loc_getitem_large_series(self, monkeypatch):
|
77 |
+
size_cutoff = 20
|
78 |
+
with monkeypatch.context():
|
79 |
+
monkeypatch.setattr(libindex, "_SIZE_CUTOFF", size_cutoff)
|
80 |
+
ser = Series(
|
81 |
+
np.arange(size_cutoff),
|
82 |
+
index=IntervalIndex.from_breaks(np.arange(size_cutoff + 1)),
|
83 |
+
)
|
84 |
+
|
85 |
+
result1 = ser.loc[:8]
|
86 |
+
result2 = ser.loc[0:8]
|
87 |
+
result3 = ser.loc[0:8:1]
|
88 |
+
tm.assert_series_equal(result1, result2)
|
89 |
+
tm.assert_series_equal(result1, result3)
|
90 |
+
|
91 |
+
def test_loc_getitem_frame(self):
|
92 |
+
# CategoricalIndex with IntervalIndex categories
|
93 |
+
df = DataFrame({"A": range(10)})
|
94 |
+
ser = pd.cut(df.A, 5)
|
95 |
+
df["B"] = ser
|
96 |
+
df = df.set_index("B")
|
97 |
+
|
98 |
+
result = df.loc[4]
|
99 |
+
expected = df.iloc[4:6]
|
100 |
+
tm.assert_frame_equal(result, expected)
|
101 |
+
|
102 |
+
with pytest.raises(KeyError, match="10"):
|
103 |
+
df.loc[10]
|
104 |
+
|
105 |
+
# single list-like
|
106 |
+
result = df.loc[[4]]
|
107 |
+
expected = df.iloc[4:6]
|
108 |
+
tm.assert_frame_equal(result, expected)
|
109 |
+
|
110 |
+
# non-unique
|
111 |
+
result = df.loc[[4, 5]]
|
112 |
+
expected = df.take([4, 5, 4, 5])
|
113 |
+
tm.assert_frame_equal(result, expected)
|
114 |
+
|
115 |
+
msg = (
|
116 |
+
r"None of \[Index\(\[10\], dtype='object', name='B'\)\] "
|
117 |
+
r"are in the \[index\]"
|
118 |
+
)
|
119 |
+
with pytest.raises(KeyError, match=msg):
|
120 |
+
df.loc[[10]]
|
121 |
+
|
122 |
+
# partial missing
|
123 |
+
with pytest.raises(KeyError, match=r"\[10\] not in index"):
|
124 |
+
df.loc[[10, 4]]
|
125 |
+
|
126 |
+
def test_getitem_interval_with_nans(self, frame_or_series, indexer_sl):
|
127 |
+
# GH#41831
|
128 |
+
|
129 |
+
index = IntervalIndex([np.nan, np.nan])
|
130 |
+
key = index[:-1]
|
131 |
+
|
132 |
+
obj = frame_or_series(range(2), index=index)
|
133 |
+
if frame_or_series is DataFrame and indexer_sl is tm.setitem:
|
134 |
+
obj = obj.T
|
135 |
+
|
136 |
+
result = indexer_sl(obj)[key]
|
137 |
+
expected = obj
|
138 |
+
|
139 |
+
tm.assert_equal(result, expected)
|
140 |
+
|
141 |
+
def test_setitem_interval_with_slice(self):
|
142 |
+
# GH#54722
|
143 |
+
ii = IntervalIndex.from_breaks(range(4, 15))
|
144 |
+
ser = Series(range(10), index=ii)
|
145 |
+
|
146 |
+
orig = ser.copy()
|
147 |
+
|
148 |
+
# This should be a no-op (used to raise)
|
149 |
+
ser.loc[1:3] = 20
|
150 |
+
tm.assert_series_equal(ser, orig)
|
151 |
+
|
152 |
+
ser.loc[6:8] = 19
|
153 |
+
orig.iloc[1:4] = 19
|
154 |
+
tm.assert_series_equal(ser, orig)
|
155 |
+
|
156 |
+
ser2 = Series(range(5), index=ii[::2])
|
157 |
+
orig2 = ser2.copy()
|
158 |
+
|
159 |
+
# this used to raise
|
160 |
+
ser2.loc[6:8] = 22 # <- raises on main, sets on branch
|
161 |
+
orig2.iloc[1] = 22
|
162 |
+
tm.assert_series_equal(ser2, orig2)
|
163 |
+
|
164 |
+
ser2.loc[5:7] = 21
|
165 |
+
orig2.iloc[:2] = 21
|
166 |
+
tm.assert_series_equal(ser2, orig2)
|
167 |
+
|
168 |
+
|
169 |
+
class TestIntervalIndexInsideMultiIndex:
|
170 |
+
def test_mi_intervalindex_slicing_with_scalar(self):
|
171 |
+
# GH#27456
|
172 |
+
ii = IntervalIndex.from_arrays(
|
173 |
+
[0, 1, 10, 11, 0, 1, 10, 11], [1, 2, 11, 12, 1, 2, 11, 12], name="MP"
|
174 |
+
)
|
175 |
+
idx = pd.MultiIndex.from_arrays(
|
176 |
+
[
|
177 |
+
pd.Index(["FC", "FC", "FC", "FC", "OWNER", "OWNER", "OWNER", "OWNER"]),
|
178 |
+
pd.Index(
|
179 |
+
["RID1", "RID1", "RID2", "RID2", "RID1", "RID1", "RID2", "RID2"]
|
180 |
+
),
|
181 |
+
ii,
|
182 |
+
]
|
183 |
+
)
|
184 |
+
|
185 |
+
idx.names = ["Item", "RID", "MP"]
|
186 |
+
df = DataFrame({"value": [1, 2, 3, 4, 5, 6, 7, 8]})
|
187 |
+
df.index = idx
|
188 |
+
|
189 |
+
query_df = DataFrame(
|
190 |
+
{
|
191 |
+
"Item": ["FC", "OWNER", "FC", "OWNER", "OWNER"],
|
192 |
+
"RID": ["RID1", "RID1", "RID1", "RID2", "RID2"],
|
193 |
+
"MP": [0.2, 1.5, 1.6, 11.1, 10.9],
|
194 |
+
}
|
195 |
+
)
|
196 |
+
|
197 |
+
query_df = query_df.sort_index()
|
198 |
+
|
199 |
+
idx = pd.MultiIndex.from_arrays([query_df.Item, query_df.RID, query_df.MP])
|
200 |
+
query_df.index = idx
|
201 |
+
result = df.value.loc[query_df.index]
|
202 |
+
|
203 |
+
# the IntervalIndex level is indexed with floats, which map to
|
204 |
+
# the intervals containing them. Matching the behavior we would get
|
205 |
+
# with _only_ an IntervalIndex, we get an IntervalIndex level back.
|
206 |
+
sliced_level = ii.take([0, 1, 1, 3, 2])
|
207 |
+
expected_index = pd.MultiIndex.from_arrays(
|
208 |
+
[idx.get_level_values(0), idx.get_level_values(1), sliced_level]
|
209 |
+
)
|
210 |
+
expected = Series([1, 6, 2, 8, 7], index=expected_index, name="value")
|
211 |
+
tm.assert_series_equal(result, expected)
|
212 |
+
|
213 |
+
@pytest.mark.xfail(not IS64, reason="GH 23440")
|
214 |
+
@pytest.mark.parametrize(
|
215 |
+
"base",
|
216 |
+
[101, 1010],
|
217 |
+
)
|
218 |
+
def test_reindex_behavior_with_interval_index(self, base):
|
219 |
+
# GH 51826
|
220 |
+
|
221 |
+
ser = Series(
|
222 |
+
range(base),
|
223 |
+
index=IntervalIndex.from_arrays(range(base), range(1, base + 1)),
|
224 |
+
)
|
225 |
+
expected_result = Series([np.nan, 0], index=[np.nan, 1.0], dtype=float)
|
226 |
+
result = ser.reindex(index=[np.nan, 1.0])
|
227 |
+
tm.assert_series_equal(result, expected_result)
|
venv/lib/python3.10/site-packages/pandas/tests/indexing/multiindex/__pycache__/test_multiindex.cpython-310.pyc
ADDED
Binary file (7.9 kB). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/indexing/multiindex/__pycache__/test_slice.cpython-310.pyc
ADDED
Binary file (17.2 kB). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/internals/__init__.py
ADDED
File without changes
|
venv/lib/python3.10/site-packages/pandas/tests/internals/__pycache__/__init__.cpython-310.pyc
ADDED
Binary file (190 Bytes). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/internals/__pycache__/test_api.cpython-310.pyc
ADDED
Binary file (2.4 kB). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/internals/__pycache__/test_internals.cpython-310.pyc
ADDED
Binary file (40.3 kB). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/internals/__pycache__/test_managers.cpython-310.pyc
ADDED
Binary file (3.08 kB). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/internals/test_api.py
ADDED
@@ -0,0 +1,86 @@
|
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|
1 |
+
"""
|
2 |
+
Tests for the pseudo-public API implemented in internals/api.py and exposed
|
3 |
+
in core.internals
|
4 |
+
"""
|
5 |
+
|
6 |
+
import pytest
|
7 |
+
|
8 |
+
import pandas as pd
|
9 |
+
import pandas._testing as tm
|
10 |
+
from pandas.core import internals
|
11 |
+
from pandas.core.internals import api
|
12 |
+
|
13 |
+
|
14 |
+
def test_internals_api():
|
15 |
+
assert internals.make_block is api.make_block
|
16 |
+
|
17 |
+
|
18 |
+
def test_namespace():
|
19 |
+
# SUBJECT TO CHANGE
|
20 |
+
|
21 |
+
modules = [
|
22 |
+
"blocks",
|
23 |
+
"concat",
|
24 |
+
"managers",
|
25 |
+
"construction",
|
26 |
+
"array_manager",
|
27 |
+
"base",
|
28 |
+
"api",
|
29 |
+
"ops",
|
30 |
+
]
|
31 |
+
expected = [
|
32 |
+
"make_block",
|
33 |
+
"DataManager",
|
34 |
+
"ArrayManager",
|
35 |
+
"BlockManager",
|
36 |
+
"SingleDataManager",
|
37 |
+
"SingleBlockManager",
|
38 |
+
"SingleArrayManager",
|
39 |
+
"concatenate_managers",
|
40 |
+
]
|
41 |
+
|
42 |
+
result = [x for x in dir(internals) if not x.startswith("__")]
|
43 |
+
assert set(result) == set(expected + modules)
|
44 |
+
|
45 |
+
|
46 |
+
@pytest.mark.parametrize(
|
47 |
+
"name",
|
48 |
+
[
|
49 |
+
"NumericBlock",
|
50 |
+
"ObjectBlock",
|
51 |
+
"Block",
|
52 |
+
"ExtensionBlock",
|
53 |
+
"DatetimeTZBlock",
|
54 |
+
],
|
55 |
+
)
|
56 |
+
def test_deprecations(name):
|
57 |
+
# GH#55139
|
58 |
+
msg = f"{name} is deprecated.* Use public APIs instead"
|
59 |
+
with tm.assert_produces_warning(DeprecationWarning, match=msg):
|
60 |
+
getattr(internals, name)
|
61 |
+
|
62 |
+
if name not in ["NumericBlock", "ObjectBlock"]:
|
63 |
+
# NumericBlock and ObjectBlock are not in the internals.api namespace
|
64 |
+
with tm.assert_produces_warning(DeprecationWarning, match=msg):
|
65 |
+
getattr(api, name)
|
66 |
+
|
67 |
+
|
68 |
+
def test_make_block_2d_with_dti():
|
69 |
+
# GH#41168
|
70 |
+
dti = pd.date_range("2012", periods=3, tz="UTC")
|
71 |
+
blk = api.make_block(dti, placement=[0])
|
72 |
+
|
73 |
+
assert blk.shape == (1, 3)
|
74 |
+
assert blk.values.shape == (1, 3)
|
75 |
+
|
76 |
+
|
77 |
+
def test_create_block_manager_from_blocks_deprecated():
|
78 |
+
# GH#33892
|
79 |
+
# If they must, downstream packages should get this from internals.api,
|
80 |
+
# not internals.
|
81 |
+
msg = (
|
82 |
+
"create_block_manager_from_blocks is deprecated and will be "
|
83 |
+
"removed in a future version. Use public APIs instead"
|
84 |
+
)
|
85 |
+
with tm.assert_produces_warning(DeprecationWarning, match=msg):
|
86 |
+
internals.create_block_manager_from_blocks
|
venv/lib/python3.10/site-packages/pandas/tests/internals/test_internals.py
ADDED
@@ -0,0 +1,1422 @@
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|
1 |
+
from datetime import (
|
2 |
+
date,
|
3 |
+
datetime,
|
4 |
+
)
|
5 |
+
import itertools
|
6 |
+
import re
|
7 |
+
|
8 |
+
import numpy as np
|
9 |
+
import pytest
|
10 |
+
|
11 |
+
from pandas._libs.internals import BlockPlacement
|
12 |
+
from pandas.compat import IS64
|
13 |
+
import pandas.util._test_decorators as td
|
14 |
+
|
15 |
+
from pandas.core.dtypes.common import is_scalar
|
16 |
+
|
17 |
+
import pandas as pd
|
18 |
+
from pandas import (
|
19 |
+
Categorical,
|
20 |
+
DataFrame,
|
21 |
+
DatetimeIndex,
|
22 |
+
Index,
|
23 |
+
IntervalIndex,
|
24 |
+
Series,
|
25 |
+
Timedelta,
|
26 |
+
Timestamp,
|
27 |
+
period_range,
|
28 |
+
)
|
29 |
+
import pandas._testing as tm
|
30 |
+
import pandas.core.algorithms as algos
|
31 |
+
from pandas.core.arrays import (
|
32 |
+
DatetimeArray,
|
33 |
+
SparseArray,
|
34 |
+
TimedeltaArray,
|
35 |
+
)
|
36 |
+
from pandas.core.internals import (
|
37 |
+
BlockManager,
|
38 |
+
SingleBlockManager,
|
39 |
+
make_block,
|
40 |
+
)
|
41 |
+
from pandas.core.internals.blocks import (
|
42 |
+
ensure_block_shape,
|
43 |
+
maybe_coerce_values,
|
44 |
+
new_block,
|
45 |
+
)
|
46 |
+
|
47 |
+
# this file contains BlockManager specific tests
|
48 |
+
# TODO(ArrayManager) factor out interleave_dtype tests
|
49 |
+
pytestmark = td.skip_array_manager_invalid_test
|
50 |
+
|
51 |
+
|
52 |
+
@pytest.fixture(params=[new_block, make_block])
|
53 |
+
def block_maker(request):
|
54 |
+
"""
|
55 |
+
Fixture to test both the internal new_block and pseudo-public make_block.
|
56 |
+
"""
|
57 |
+
return request.param
|
58 |
+
|
59 |
+
|
60 |
+
@pytest.fixture
|
61 |
+
def mgr():
|
62 |
+
return create_mgr(
|
63 |
+
"a: f8; b: object; c: f8; d: object; e: f8;"
|
64 |
+
"f: bool; g: i8; h: complex; i: datetime-1; j: datetime-2;"
|
65 |
+
"k: M8[ns, US/Eastern]; l: M8[ns, CET];"
|
66 |
+
)
|
67 |
+
|
68 |
+
|
69 |
+
def assert_block_equal(left, right):
|
70 |
+
tm.assert_numpy_array_equal(left.values, right.values)
|
71 |
+
assert left.dtype == right.dtype
|
72 |
+
assert isinstance(left.mgr_locs, BlockPlacement)
|
73 |
+
assert isinstance(right.mgr_locs, BlockPlacement)
|
74 |
+
tm.assert_numpy_array_equal(left.mgr_locs.as_array, right.mgr_locs.as_array)
|
75 |
+
|
76 |
+
|
77 |
+
def get_numeric_mat(shape):
|
78 |
+
arr = np.arange(shape[0])
|
79 |
+
return np.lib.stride_tricks.as_strided(
|
80 |
+
x=arr, shape=shape, strides=(arr.itemsize,) + (0,) * (len(shape) - 1)
|
81 |
+
).copy()
|
82 |
+
|
83 |
+
|
84 |
+
N = 10
|
85 |
+
|
86 |
+
|
87 |
+
def create_block(typestr, placement, item_shape=None, num_offset=0, maker=new_block):
|
88 |
+
"""
|
89 |
+
Supported typestr:
|
90 |
+
|
91 |
+
* float, f8, f4, f2
|
92 |
+
* int, i8, i4, i2, i1
|
93 |
+
* uint, u8, u4, u2, u1
|
94 |
+
* complex, c16, c8
|
95 |
+
* bool
|
96 |
+
* object, string, O
|
97 |
+
* datetime, dt, M8[ns], M8[ns, tz]
|
98 |
+
* timedelta, td, m8[ns]
|
99 |
+
* sparse (SparseArray with fill_value=0.0)
|
100 |
+
* sparse_na (SparseArray with fill_value=np.nan)
|
101 |
+
* category, category2
|
102 |
+
|
103 |
+
"""
|
104 |
+
placement = BlockPlacement(placement)
|
105 |
+
num_items = len(placement)
|
106 |
+
|
107 |
+
if item_shape is None:
|
108 |
+
item_shape = (N,)
|
109 |
+
|
110 |
+
shape = (num_items,) + item_shape
|
111 |
+
|
112 |
+
mat = get_numeric_mat(shape)
|
113 |
+
|
114 |
+
if typestr in (
|
115 |
+
"float",
|
116 |
+
"f8",
|
117 |
+
"f4",
|
118 |
+
"f2",
|
119 |
+
"int",
|
120 |
+
"i8",
|
121 |
+
"i4",
|
122 |
+
"i2",
|
123 |
+
"i1",
|
124 |
+
"uint",
|
125 |
+
"u8",
|
126 |
+
"u4",
|
127 |
+
"u2",
|
128 |
+
"u1",
|
129 |
+
):
|
130 |
+
values = mat.astype(typestr) + num_offset
|
131 |
+
elif typestr in ("complex", "c16", "c8"):
|
132 |
+
values = 1.0j * (mat.astype(typestr) + num_offset)
|
133 |
+
elif typestr in ("object", "string", "O"):
|
134 |
+
values = np.reshape([f"A{i:d}" for i in mat.ravel() + num_offset], shape)
|
135 |
+
elif typestr in ("b", "bool"):
|
136 |
+
values = np.ones(shape, dtype=np.bool_)
|
137 |
+
elif typestr in ("datetime", "dt", "M8[ns]"):
|
138 |
+
values = (mat * 1e9).astype("M8[ns]")
|
139 |
+
elif typestr.startswith("M8[ns"):
|
140 |
+
# datetime with tz
|
141 |
+
m = re.search(r"M8\[ns,\s*(\w+\/?\w*)\]", typestr)
|
142 |
+
assert m is not None, f"incompatible typestr -> {typestr}"
|
143 |
+
tz = m.groups()[0]
|
144 |
+
assert num_items == 1, "must have only 1 num items for a tz-aware"
|
145 |
+
values = DatetimeIndex(np.arange(N) * 10**9, tz=tz)._data
|
146 |
+
values = ensure_block_shape(values, ndim=len(shape))
|
147 |
+
elif typestr in ("timedelta", "td", "m8[ns]"):
|
148 |
+
values = (mat * 1).astype("m8[ns]")
|
149 |
+
elif typestr in ("category",):
|
150 |
+
values = Categorical([1, 1, 2, 2, 3, 3, 3, 3, 4, 4])
|
151 |
+
elif typestr in ("category2",):
|
152 |
+
values = Categorical(["a", "a", "a", "a", "b", "b", "c", "c", "c", "d"])
|
153 |
+
elif typestr in ("sparse", "sparse_na"):
|
154 |
+
if shape[-1] != 10:
|
155 |
+
# We also are implicitly assuming this in the category cases above
|
156 |
+
raise NotImplementedError
|
157 |
+
|
158 |
+
assert all(s == 1 for s in shape[:-1])
|
159 |
+
if typestr.endswith("_na"):
|
160 |
+
fill_value = np.nan
|
161 |
+
else:
|
162 |
+
fill_value = 0.0
|
163 |
+
values = SparseArray(
|
164 |
+
[fill_value, fill_value, 1, 2, 3, fill_value, 4, 5, fill_value, 6],
|
165 |
+
fill_value=fill_value,
|
166 |
+
)
|
167 |
+
arr = values.sp_values.view()
|
168 |
+
arr += num_offset - 1
|
169 |
+
else:
|
170 |
+
raise ValueError(f'Unsupported typestr: "{typestr}"')
|
171 |
+
|
172 |
+
values = maybe_coerce_values(values)
|
173 |
+
return maker(values, placement=placement, ndim=len(shape))
|
174 |
+
|
175 |
+
|
176 |
+
def create_single_mgr(typestr, num_rows=None):
|
177 |
+
if num_rows is None:
|
178 |
+
num_rows = N
|
179 |
+
|
180 |
+
return SingleBlockManager(
|
181 |
+
create_block(typestr, placement=slice(0, num_rows), item_shape=()),
|
182 |
+
Index(np.arange(num_rows)),
|
183 |
+
)
|
184 |
+
|
185 |
+
|
186 |
+
def create_mgr(descr, item_shape=None):
|
187 |
+
"""
|
188 |
+
Construct BlockManager from string description.
|
189 |
+
|
190 |
+
String description syntax looks similar to np.matrix initializer. It looks
|
191 |
+
like this::
|
192 |
+
|
193 |
+
a,b,c: f8; d,e,f: i8
|
194 |
+
|
195 |
+
Rules are rather simple:
|
196 |
+
|
197 |
+
* see list of supported datatypes in `create_block` method
|
198 |
+
* components are semicolon-separated
|
199 |
+
* each component is `NAME,NAME,NAME: DTYPE_ID`
|
200 |
+
* whitespace around colons & semicolons are removed
|
201 |
+
* components with same DTYPE_ID are combined into single block
|
202 |
+
* to force multiple blocks with same dtype, use '-SUFFIX'::
|
203 |
+
|
204 |
+
'a:f8-1; b:f8-2; c:f8-foobar'
|
205 |
+
|
206 |
+
"""
|
207 |
+
if item_shape is None:
|
208 |
+
item_shape = (N,)
|
209 |
+
|
210 |
+
offset = 0
|
211 |
+
mgr_items = []
|
212 |
+
block_placements = {}
|
213 |
+
for d in descr.split(";"):
|
214 |
+
d = d.strip()
|
215 |
+
if not len(d):
|
216 |
+
continue
|
217 |
+
names, blockstr = d.partition(":")[::2]
|
218 |
+
blockstr = blockstr.strip()
|
219 |
+
names = names.strip().split(",")
|
220 |
+
|
221 |
+
mgr_items.extend(names)
|
222 |
+
placement = list(np.arange(len(names)) + offset)
|
223 |
+
try:
|
224 |
+
block_placements[blockstr].extend(placement)
|
225 |
+
except KeyError:
|
226 |
+
block_placements[blockstr] = placement
|
227 |
+
offset += len(names)
|
228 |
+
|
229 |
+
mgr_items = Index(mgr_items)
|
230 |
+
|
231 |
+
blocks = []
|
232 |
+
num_offset = 0
|
233 |
+
for blockstr, placement in block_placements.items():
|
234 |
+
typestr = blockstr.split("-")[0]
|
235 |
+
blocks.append(
|
236 |
+
create_block(
|
237 |
+
typestr, placement, item_shape=item_shape, num_offset=num_offset
|
238 |
+
)
|
239 |
+
)
|
240 |
+
num_offset += len(placement)
|
241 |
+
|
242 |
+
sblocks = sorted(blocks, key=lambda b: b.mgr_locs[0])
|
243 |
+
return BlockManager(
|
244 |
+
tuple(sblocks),
|
245 |
+
[mgr_items] + [Index(np.arange(n)) for n in item_shape],
|
246 |
+
)
|
247 |
+
|
248 |
+
|
249 |
+
@pytest.fixture
|
250 |
+
def fblock():
|
251 |
+
return create_block("float", [0, 2, 4])
|
252 |
+
|
253 |
+
|
254 |
+
class TestBlock:
|
255 |
+
def test_constructor(self):
|
256 |
+
int32block = create_block("i4", [0])
|
257 |
+
assert int32block.dtype == np.int32
|
258 |
+
|
259 |
+
@pytest.mark.parametrize(
|
260 |
+
"typ, data",
|
261 |
+
[
|
262 |
+
["float", [0, 2, 4]],
|
263 |
+
["complex", [7]],
|
264 |
+
["object", [1, 3]],
|
265 |
+
["bool", [5]],
|
266 |
+
],
|
267 |
+
)
|
268 |
+
def test_pickle(self, typ, data):
|
269 |
+
blk = create_block(typ, data)
|
270 |
+
assert_block_equal(tm.round_trip_pickle(blk), blk)
|
271 |
+
|
272 |
+
def test_mgr_locs(self, fblock):
|
273 |
+
assert isinstance(fblock.mgr_locs, BlockPlacement)
|
274 |
+
tm.assert_numpy_array_equal(
|
275 |
+
fblock.mgr_locs.as_array, np.array([0, 2, 4], dtype=np.intp)
|
276 |
+
)
|
277 |
+
|
278 |
+
def test_attrs(self, fblock):
|
279 |
+
assert fblock.shape == fblock.values.shape
|
280 |
+
assert fblock.dtype == fblock.values.dtype
|
281 |
+
assert len(fblock) == len(fblock.values)
|
282 |
+
|
283 |
+
def test_copy(self, fblock):
|
284 |
+
cop = fblock.copy()
|
285 |
+
assert cop is not fblock
|
286 |
+
assert_block_equal(fblock, cop)
|
287 |
+
|
288 |
+
def test_delete(self, fblock):
|
289 |
+
newb = fblock.copy()
|
290 |
+
locs = newb.mgr_locs
|
291 |
+
nb = newb.delete(0)[0]
|
292 |
+
assert newb.mgr_locs is locs
|
293 |
+
|
294 |
+
assert nb is not newb
|
295 |
+
|
296 |
+
tm.assert_numpy_array_equal(
|
297 |
+
nb.mgr_locs.as_array, np.array([2, 4], dtype=np.intp)
|
298 |
+
)
|
299 |
+
assert not (newb.values[0] == 1).all()
|
300 |
+
assert (nb.values[0] == 1).all()
|
301 |
+
|
302 |
+
newb = fblock.copy()
|
303 |
+
locs = newb.mgr_locs
|
304 |
+
nb = newb.delete(1)
|
305 |
+
assert len(nb) == 2
|
306 |
+
assert newb.mgr_locs is locs
|
307 |
+
|
308 |
+
tm.assert_numpy_array_equal(
|
309 |
+
nb[0].mgr_locs.as_array, np.array([0], dtype=np.intp)
|
310 |
+
)
|
311 |
+
tm.assert_numpy_array_equal(
|
312 |
+
nb[1].mgr_locs.as_array, np.array([4], dtype=np.intp)
|
313 |
+
)
|
314 |
+
assert not (newb.values[1] == 2).all()
|
315 |
+
assert (nb[1].values[0] == 2).all()
|
316 |
+
|
317 |
+
newb = fblock.copy()
|
318 |
+
nb = newb.delete(2)
|
319 |
+
assert len(nb) == 1
|
320 |
+
tm.assert_numpy_array_equal(
|
321 |
+
nb[0].mgr_locs.as_array, np.array([0, 2], dtype=np.intp)
|
322 |
+
)
|
323 |
+
assert (nb[0].values[1] == 1).all()
|
324 |
+
|
325 |
+
newb = fblock.copy()
|
326 |
+
|
327 |
+
with pytest.raises(IndexError, match=None):
|
328 |
+
newb.delete(3)
|
329 |
+
|
330 |
+
def test_delete_datetimelike(self):
|
331 |
+
# dont use np.delete on values, as that will coerce from DTA/TDA to ndarray
|
332 |
+
arr = np.arange(20, dtype="i8").reshape(5, 4).view("m8[ns]")
|
333 |
+
df = DataFrame(arr)
|
334 |
+
blk = df._mgr.blocks[0]
|
335 |
+
assert isinstance(blk.values, TimedeltaArray)
|
336 |
+
|
337 |
+
nb = blk.delete(1)
|
338 |
+
assert len(nb) == 2
|
339 |
+
assert isinstance(nb[0].values, TimedeltaArray)
|
340 |
+
assert isinstance(nb[1].values, TimedeltaArray)
|
341 |
+
|
342 |
+
df = DataFrame(arr.view("M8[ns]"))
|
343 |
+
blk = df._mgr.blocks[0]
|
344 |
+
assert isinstance(blk.values, DatetimeArray)
|
345 |
+
|
346 |
+
nb = blk.delete([1, 3])
|
347 |
+
assert len(nb) == 2
|
348 |
+
assert isinstance(nb[0].values, DatetimeArray)
|
349 |
+
assert isinstance(nb[1].values, DatetimeArray)
|
350 |
+
|
351 |
+
def test_split(self):
|
352 |
+
# GH#37799
|
353 |
+
values = np.random.default_rng(2).standard_normal((3, 4))
|
354 |
+
blk = new_block(values, placement=BlockPlacement([3, 1, 6]), ndim=2)
|
355 |
+
result = blk._split()
|
356 |
+
|
357 |
+
# check that we get views, not copies
|
358 |
+
values[:] = -9999
|
359 |
+
assert (blk.values == -9999).all()
|
360 |
+
|
361 |
+
assert len(result) == 3
|
362 |
+
expected = [
|
363 |
+
new_block(values[[0]], placement=BlockPlacement([3]), ndim=2),
|
364 |
+
new_block(values[[1]], placement=BlockPlacement([1]), ndim=2),
|
365 |
+
new_block(values[[2]], placement=BlockPlacement([6]), ndim=2),
|
366 |
+
]
|
367 |
+
for res, exp in zip(result, expected):
|
368 |
+
assert_block_equal(res, exp)
|
369 |
+
|
370 |
+
|
371 |
+
class TestBlockManager:
|
372 |
+
def test_attrs(self):
|
373 |
+
mgr = create_mgr("a,b,c: f8-1; d,e,f: f8-2")
|
374 |
+
assert mgr.nblocks == 2
|
375 |
+
assert len(mgr) == 6
|
376 |
+
|
377 |
+
def test_duplicate_ref_loc_failure(self):
|
378 |
+
tmp_mgr = create_mgr("a:bool; a: f8")
|
379 |
+
|
380 |
+
axes, blocks = tmp_mgr.axes, tmp_mgr.blocks
|
381 |
+
|
382 |
+
blocks[0].mgr_locs = BlockPlacement(np.array([0]))
|
383 |
+
blocks[1].mgr_locs = BlockPlacement(np.array([0]))
|
384 |
+
|
385 |
+
# test trying to create block manager with overlapping ref locs
|
386 |
+
|
387 |
+
msg = "Gaps in blk ref_locs"
|
388 |
+
|
389 |
+
with pytest.raises(AssertionError, match=msg):
|
390 |
+
mgr = BlockManager(blocks, axes)
|
391 |
+
mgr._rebuild_blknos_and_blklocs()
|
392 |
+
|
393 |
+
blocks[0].mgr_locs = BlockPlacement(np.array([0]))
|
394 |
+
blocks[1].mgr_locs = BlockPlacement(np.array([1]))
|
395 |
+
mgr = BlockManager(blocks, axes)
|
396 |
+
mgr.iget(1)
|
397 |
+
|
398 |
+
def test_pickle(self, mgr):
|
399 |
+
mgr2 = tm.round_trip_pickle(mgr)
|
400 |
+
tm.assert_frame_equal(
|
401 |
+
DataFrame._from_mgr(mgr, axes=mgr.axes),
|
402 |
+
DataFrame._from_mgr(mgr2, axes=mgr2.axes),
|
403 |
+
)
|
404 |
+
|
405 |
+
# GH2431
|
406 |
+
assert hasattr(mgr2, "_is_consolidated")
|
407 |
+
assert hasattr(mgr2, "_known_consolidated")
|
408 |
+
|
409 |
+
# reset to False on load
|
410 |
+
assert not mgr2._is_consolidated
|
411 |
+
assert not mgr2._known_consolidated
|
412 |
+
|
413 |
+
@pytest.mark.parametrize("mgr_string", ["a,a,a:f8", "a: f8; a: i8"])
|
414 |
+
def test_non_unique_pickle(self, mgr_string):
|
415 |
+
mgr = create_mgr(mgr_string)
|
416 |
+
mgr2 = tm.round_trip_pickle(mgr)
|
417 |
+
tm.assert_frame_equal(
|
418 |
+
DataFrame._from_mgr(mgr, axes=mgr.axes),
|
419 |
+
DataFrame._from_mgr(mgr2, axes=mgr2.axes),
|
420 |
+
)
|
421 |
+
|
422 |
+
def test_categorical_block_pickle(self):
|
423 |
+
mgr = create_mgr("a: category")
|
424 |
+
mgr2 = tm.round_trip_pickle(mgr)
|
425 |
+
tm.assert_frame_equal(
|
426 |
+
DataFrame._from_mgr(mgr, axes=mgr.axes),
|
427 |
+
DataFrame._from_mgr(mgr2, axes=mgr2.axes),
|
428 |
+
)
|
429 |
+
|
430 |
+
smgr = create_single_mgr("category")
|
431 |
+
smgr2 = tm.round_trip_pickle(smgr)
|
432 |
+
tm.assert_series_equal(
|
433 |
+
Series()._constructor_from_mgr(smgr, axes=smgr.axes),
|
434 |
+
Series()._constructor_from_mgr(smgr2, axes=smgr2.axes),
|
435 |
+
)
|
436 |
+
|
437 |
+
def test_iget(self):
|
438 |
+
cols = Index(list("abc"))
|
439 |
+
values = np.random.default_rng(2).random((3, 3))
|
440 |
+
block = new_block(
|
441 |
+
values=values.copy(),
|
442 |
+
placement=BlockPlacement(np.arange(3, dtype=np.intp)),
|
443 |
+
ndim=values.ndim,
|
444 |
+
)
|
445 |
+
mgr = BlockManager(blocks=(block,), axes=[cols, Index(np.arange(3))])
|
446 |
+
|
447 |
+
tm.assert_almost_equal(mgr.iget(0).internal_values(), values[0])
|
448 |
+
tm.assert_almost_equal(mgr.iget(1).internal_values(), values[1])
|
449 |
+
tm.assert_almost_equal(mgr.iget(2).internal_values(), values[2])
|
450 |
+
|
451 |
+
def test_set(self):
|
452 |
+
mgr = create_mgr("a,b,c: int", item_shape=(3,))
|
453 |
+
|
454 |
+
mgr.insert(len(mgr.items), "d", np.array(["foo"] * 3))
|
455 |
+
mgr.iset(1, np.array(["bar"] * 3))
|
456 |
+
tm.assert_numpy_array_equal(mgr.iget(0).internal_values(), np.array([0] * 3))
|
457 |
+
tm.assert_numpy_array_equal(
|
458 |
+
mgr.iget(1).internal_values(), np.array(["bar"] * 3, dtype=np.object_)
|
459 |
+
)
|
460 |
+
tm.assert_numpy_array_equal(mgr.iget(2).internal_values(), np.array([2] * 3))
|
461 |
+
tm.assert_numpy_array_equal(
|
462 |
+
mgr.iget(3).internal_values(), np.array(["foo"] * 3, dtype=np.object_)
|
463 |
+
)
|
464 |
+
|
465 |
+
def test_set_change_dtype(self, mgr):
|
466 |
+
mgr.insert(len(mgr.items), "baz", np.zeros(N, dtype=bool))
|
467 |
+
|
468 |
+
mgr.iset(mgr.items.get_loc("baz"), np.repeat("foo", N))
|
469 |
+
idx = mgr.items.get_loc("baz")
|
470 |
+
assert mgr.iget(idx).dtype == np.object_
|
471 |
+
|
472 |
+
mgr2 = mgr.consolidate()
|
473 |
+
mgr2.iset(mgr2.items.get_loc("baz"), np.repeat("foo", N))
|
474 |
+
idx = mgr2.items.get_loc("baz")
|
475 |
+
assert mgr2.iget(idx).dtype == np.object_
|
476 |
+
|
477 |
+
mgr2.insert(
|
478 |
+
len(mgr2.items),
|
479 |
+
"quux",
|
480 |
+
np.random.default_rng(2).standard_normal(N).astype(int),
|
481 |
+
)
|
482 |
+
idx = mgr2.items.get_loc("quux")
|
483 |
+
assert mgr2.iget(idx).dtype == np.dtype(int)
|
484 |
+
|
485 |
+
mgr2.iset(
|
486 |
+
mgr2.items.get_loc("quux"), np.random.default_rng(2).standard_normal(N)
|
487 |
+
)
|
488 |
+
assert mgr2.iget(idx).dtype == np.float64
|
489 |
+
|
490 |
+
def test_copy(self, mgr):
|
491 |
+
cp = mgr.copy(deep=False)
|
492 |
+
for blk, cp_blk in zip(mgr.blocks, cp.blocks):
|
493 |
+
# view assertion
|
494 |
+
tm.assert_equal(cp_blk.values, blk.values)
|
495 |
+
if isinstance(blk.values, np.ndarray):
|
496 |
+
assert cp_blk.values.base is blk.values.base
|
497 |
+
else:
|
498 |
+
# DatetimeTZBlock has DatetimeIndex values
|
499 |
+
assert cp_blk.values._ndarray.base is blk.values._ndarray.base
|
500 |
+
|
501 |
+
# copy(deep=True) consolidates, so the block-wise assertions will
|
502 |
+
# fail is mgr is not consolidated
|
503 |
+
mgr._consolidate_inplace()
|
504 |
+
cp = mgr.copy(deep=True)
|
505 |
+
for blk, cp_blk in zip(mgr.blocks, cp.blocks):
|
506 |
+
bvals = blk.values
|
507 |
+
cpvals = cp_blk.values
|
508 |
+
|
509 |
+
tm.assert_equal(cpvals, bvals)
|
510 |
+
|
511 |
+
if isinstance(cpvals, np.ndarray):
|
512 |
+
lbase = cpvals.base
|
513 |
+
rbase = bvals.base
|
514 |
+
else:
|
515 |
+
lbase = cpvals._ndarray.base
|
516 |
+
rbase = bvals._ndarray.base
|
517 |
+
|
518 |
+
# copy assertion we either have a None for a base or in case of
|
519 |
+
# some blocks it is an array (e.g. datetimetz), but was copied
|
520 |
+
if isinstance(cpvals, DatetimeArray):
|
521 |
+
assert (lbase is None and rbase is None) or (lbase is not rbase)
|
522 |
+
elif not isinstance(cpvals, np.ndarray):
|
523 |
+
assert lbase is not rbase
|
524 |
+
else:
|
525 |
+
assert lbase is None and rbase is None
|
526 |
+
|
527 |
+
def test_sparse(self):
|
528 |
+
mgr = create_mgr("a: sparse-1; b: sparse-2")
|
529 |
+
assert mgr.as_array().dtype == np.float64
|
530 |
+
|
531 |
+
def test_sparse_mixed(self):
|
532 |
+
mgr = create_mgr("a: sparse-1; b: sparse-2; c: f8")
|
533 |
+
assert len(mgr.blocks) == 3
|
534 |
+
assert isinstance(mgr, BlockManager)
|
535 |
+
|
536 |
+
@pytest.mark.parametrize(
|
537 |
+
"mgr_string, dtype",
|
538 |
+
[("c: f4; d: f2", np.float32), ("c: f4; d: f2; e: f8", np.float64)],
|
539 |
+
)
|
540 |
+
def test_as_array_float(self, mgr_string, dtype):
|
541 |
+
mgr = create_mgr(mgr_string)
|
542 |
+
assert mgr.as_array().dtype == dtype
|
543 |
+
|
544 |
+
@pytest.mark.parametrize(
|
545 |
+
"mgr_string, dtype",
|
546 |
+
[
|
547 |
+
("a: bool-1; b: bool-2", np.bool_),
|
548 |
+
("a: i8-1; b: i8-2; c: i4; d: i2; e: u1", np.int64),
|
549 |
+
("c: i4; d: i2; e: u1", np.int32),
|
550 |
+
],
|
551 |
+
)
|
552 |
+
def test_as_array_int_bool(self, mgr_string, dtype):
|
553 |
+
mgr = create_mgr(mgr_string)
|
554 |
+
assert mgr.as_array().dtype == dtype
|
555 |
+
|
556 |
+
def test_as_array_datetime(self):
|
557 |
+
mgr = create_mgr("h: datetime-1; g: datetime-2")
|
558 |
+
assert mgr.as_array().dtype == "M8[ns]"
|
559 |
+
|
560 |
+
def test_as_array_datetime_tz(self):
|
561 |
+
mgr = create_mgr("h: M8[ns, US/Eastern]; g: M8[ns, CET]")
|
562 |
+
assert mgr.iget(0).dtype == "datetime64[ns, US/Eastern]"
|
563 |
+
assert mgr.iget(1).dtype == "datetime64[ns, CET]"
|
564 |
+
assert mgr.as_array().dtype == "object"
|
565 |
+
|
566 |
+
@pytest.mark.parametrize("t", ["float16", "float32", "float64", "int32", "int64"])
|
567 |
+
def test_astype(self, t):
|
568 |
+
# coerce all
|
569 |
+
mgr = create_mgr("c: f4; d: f2; e: f8")
|
570 |
+
|
571 |
+
t = np.dtype(t)
|
572 |
+
tmgr = mgr.astype(t)
|
573 |
+
assert tmgr.iget(0).dtype.type == t
|
574 |
+
assert tmgr.iget(1).dtype.type == t
|
575 |
+
assert tmgr.iget(2).dtype.type == t
|
576 |
+
|
577 |
+
# mixed
|
578 |
+
mgr = create_mgr("a,b: object; c: bool; d: datetime; e: f4; f: f2; g: f8")
|
579 |
+
|
580 |
+
t = np.dtype(t)
|
581 |
+
tmgr = mgr.astype(t, errors="ignore")
|
582 |
+
assert tmgr.iget(2).dtype.type == t
|
583 |
+
assert tmgr.iget(4).dtype.type == t
|
584 |
+
assert tmgr.iget(5).dtype.type == t
|
585 |
+
assert tmgr.iget(6).dtype.type == t
|
586 |
+
|
587 |
+
assert tmgr.iget(0).dtype.type == np.object_
|
588 |
+
assert tmgr.iget(1).dtype.type == np.object_
|
589 |
+
if t != np.int64:
|
590 |
+
assert tmgr.iget(3).dtype.type == np.datetime64
|
591 |
+
else:
|
592 |
+
assert tmgr.iget(3).dtype.type == t
|
593 |
+
|
594 |
+
def test_convert(self, using_infer_string):
|
595 |
+
def _compare(old_mgr, new_mgr):
|
596 |
+
"""compare the blocks, numeric compare ==, object don't"""
|
597 |
+
old_blocks = set(old_mgr.blocks)
|
598 |
+
new_blocks = set(new_mgr.blocks)
|
599 |
+
assert len(old_blocks) == len(new_blocks)
|
600 |
+
|
601 |
+
# compare non-numeric
|
602 |
+
for b in old_blocks:
|
603 |
+
found = False
|
604 |
+
for nb in new_blocks:
|
605 |
+
if (b.values == nb.values).all():
|
606 |
+
found = True
|
607 |
+
break
|
608 |
+
assert found
|
609 |
+
|
610 |
+
for b in new_blocks:
|
611 |
+
found = False
|
612 |
+
for ob in old_blocks:
|
613 |
+
if (b.values == ob.values).all():
|
614 |
+
found = True
|
615 |
+
break
|
616 |
+
assert found
|
617 |
+
|
618 |
+
# noops
|
619 |
+
mgr = create_mgr("f: i8; g: f8")
|
620 |
+
new_mgr = mgr.convert(copy=True)
|
621 |
+
_compare(mgr, new_mgr)
|
622 |
+
|
623 |
+
# convert
|
624 |
+
mgr = create_mgr("a,b,foo: object; f: i8; g: f8")
|
625 |
+
mgr.iset(0, np.array(["1"] * N, dtype=np.object_))
|
626 |
+
mgr.iset(1, np.array(["2."] * N, dtype=np.object_))
|
627 |
+
mgr.iset(2, np.array(["foo."] * N, dtype=np.object_))
|
628 |
+
new_mgr = mgr.convert(copy=True)
|
629 |
+
dtype = "string[pyarrow_numpy]" if using_infer_string else np.object_
|
630 |
+
assert new_mgr.iget(0).dtype == dtype
|
631 |
+
assert new_mgr.iget(1).dtype == dtype
|
632 |
+
assert new_mgr.iget(2).dtype == dtype
|
633 |
+
assert new_mgr.iget(3).dtype == np.int64
|
634 |
+
assert new_mgr.iget(4).dtype == np.float64
|
635 |
+
|
636 |
+
mgr = create_mgr(
|
637 |
+
"a,b,foo: object; f: i4; bool: bool; dt: datetime; i: i8; g: f8; h: f2"
|
638 |
+
)
|
639 |
+
mgr.iset(0, np.array(["1"] * N, dtype=np.object_))
|
640 |
+
mgr.iset(1, np.array(["2."] * N, dtype=np.object_))
|
641 |
+
mgr.iset(2, np.array(["foo."] * N, dtype=np.object_))
|
642 |
+
new_mgr = mgr.convert(copy=True)
|
643 |
+
assert new_mgr.iget(0).dtype == dtype
|
644 |
+
assert new_mgr.iget(1).dtype == dtype
|
645 |
+
assert new_mgr.iget(2).dtype == dtype
|
646 |
+
assert new_mgr.iget(3).dtype == np.int32
|
647 |
+
assert new_mgr.iget(4).dtype == np.bool_
|
648 |
+
assert new_mgr.iget(5).dtype.type, np.datetime64
|
649 |
+
assert new_mgr.iget(6).dtype == np.int64
|
650 |
+
assert new_mgr.iget(7).dtype == np.float64
|
651 |
+
assert new_mgr.iget(8).dtype == np.float16
|
652 |
+
|
653 |
+
def test_interleave(self):
|
654 |
+
# self
|
655 |
+
for dtype in ["f8", "i8", "object", "bool", "complex", "M8[ns]", "m8[ns]"]:
|
656 |
+
mgr = create_mgr(f"a: {dtype}")
|
657 |
+
assert mgr.as_array().dtype == dtype
|
658 |
+
mgr = create_mgr(f"a: {dtype}; b: {dtype}")
|
659 |
+
assert mgr.as_array().dtype == dtype
|
660 |
+
|
661 |
+
@pytest.mark.parametrize(
|
662 |
+
"mgr_string, dtype",
|
663 |
+
[
|
664 |
+
("a: category", "i8"),
|
665 |
+
("a: category; b: category", "i8"),
|
666 |
+
("a: category; b: category2", "object"),
|
667 |
+
("a: category2", "object"),
|
668 |
+
("a: category2; b: category2", "object"),
|
669 |
+
("a: f8", "f8"),
|
670 |
+
("a: f8; b: i8", "f8"),
|
671 |
+
("a: f4; b: i8", "f8"),
|
672 |
+
("a: f4; b: i8; d: object", "object"),
|
673 |
+
("a: bool; b: i8", "object"),
|
674 |
+
("a: complex", "complex"),
|
675 |
+
("a: f8; b: category", "object"),
|
676 |
+
("a: M8[ns]; b: category", "object"),
|
677 |
+
("a: M8[ns]; b: bool", "object"),
|
678 |
+
("a: M8[ns]; b: i8", "object"),
|
679 |
+
("a: m8[ns]; b: bool", "object"),
|
680 |
+
("a: m8[ns]; b: i8", "object"),
|
681 |
+
("a: M8[ns]; b: m8[ns]", "object"),
|
682 |
+
],
|
683 |
+
)
|
684 |
+
def test_interleave_dtype(self, mgr_string, dtype):
|
685 |
+
# will be converted according the actual dtype of the underlying
|
686 |
+
mgr = create_mgr("a: category")
|
687 |
+
assert mgr.as_array().dtype == "i8"
|
688 |
+
mgr = create_mgr("a: category; b: category2")
|
689 |
+
assert mgr.as_array().dtype == "object"
|
690 |
+
mgr = create_mgr("a: category2")
|
691 |
+
assert mgr.as_array().dtype == "object"
|
692 |
+
|
693 |
+
# combinations
|
694 |
+
mgr = create_mgr("a: f8")
|
695 |
+
assert mgr.as_array().dtype == "f8"
|
696 |
+
mgr = create_mgr("a: f8; b: i8")
|
697 |
+
assert mgr.as_array().dtype == "f8"
|
698 |
+
mgr = create_mgr("a: f4; b: i8")
|
699 |
+
assert mgr.as_array().dtype == "f8"
|
700 |
+
mgr = create_mgr("a: f4; b: i8; d: object")
|
701 |
+
assert mgr.as_array().dtype == "object"
|
702 |
+
mgr = create_mgr("a: bool; b: i8")
|
703 |
+
assert mgr.as_array().dtype == "object"
|
704 |
+
mgr = create_mgr("a: complex")
|
705 |
+
assert mgr.as_array().dtype == "complex"
|
706 |
+
mgr = create_mgr("a: f8; b: category")
|
707 |
+
assert mgr.as_array().dtype == "f8"
|
708 |
+
mgr = create_mgr("a: M8[ns]; b: category")
|
709 |
+
assert mgr.as_array().dtype == "object"
|
710 |
+
mgr = create_mgr("a: M8[ns]; b: bool")
|
711 |
+
assert mgr.as_array().dtype == "object"
|
712 |
+
mgr = create_mgr("a: M8[ns]; b: i8")
|
713 |
+
assert mgr.as_array().dtype == "object"
|
714 |
+
mgr = create_mgr("a: m8[ns]; b: bool")
|
715 |
+
assert mgr.as_array().dtype == "object"
|
716 |
+
mgr = create_mgr("a: m8[ns]; b: i8")
|
717 |
+
assert mgr.as_array().dtype == "object"
|
718 |
+
mgr = create_mgr("a: M8[ns]; b: m8[ns]")
|
719 |
+
assert mgr.as_array().dtype == "object"
|
720 |
+
|
721 |
+
def test_consolidate_ordering_issues(self, mgr):
|
722 |
+
mgr.iset(mgr.items.get_loc("f"), np.random.default_rng(2).standard_normal(N))
|
723 |
+
mgr.iset(mgr.items.get_loc("d"), np.random.default_rng(2).standard_normal(N))
|
724 |
+
mgr.iset(mgr.items.get_loc("b"), np.random.default_rng(2).standard_normal(N))
|
725 |
+
mgr.iset(mgr.items.get_loc("g"), np.random.default_rng(2).standard_normal(N))
|
726 |
+
mgr.iset(mgr.items.get_loc("h"), np.random.default_rng(2).standard_normal(N))
|
727 |
+
|
728 |
+
# we have datetime/tz blocks in mgr
|
729 |
+
cons = mgr.consolidate()
|
730 |
+
assert cons.nblocks == 4
|
731 |
+
cons = mgr.consolidate().get_numeric_data()
|
732 |
+
assert cons.nblocks == 1
|
733 |
+
assert isinstance(cons.blocks[0].mgr_locs, BlockPlacement)
|
734 |
+
tm.assert_numpy_array_equal(
|
735 |
+
cons.blocks[0].mgr_locs.as_array, np.arange(len(cons.items), dtype=np.intp)
|
736 |
+
)
|
737 |
+
|
738 |
+
def test_reindex_items(self):
|
739 |
+
# mgr is not consolidated, f8 & f8-2 blocks
|
740 |
+
mgr = create_mgr("a: f8; b: i8; c: f8; d: i8; e: f8; f: bool; g: f8-2")
|
741 |
+
|
742 |
+
reindexed = mgr.reindex_axis(["g", "c", "a", "d"], axis=0)
|
743 |
+
# reindex_axis does not consolidate_inplace, as that risks failing to
|
744 |
+
# invalidate _item_cache
|
745 |
+
assert not reindexed.is_consolidated()
|
746 |
+
|
747 |
+
tm.assert_index_equal(reindexed.items, Index(["g", "c", "a", "d"]))
|
748 |
+
tm.assert_almost_equal(
|
749 |
+
mgr.iget(6).internal_values(), reindexed.iget(0).internal_values()
|
750 |
+
)
|
751 |
+
tm.assert_almost_equal(
|
752 |
+
mgr.iget(2).internal_values(), reindexed.iget(1).internal_values()
|
753 |
+
)
|
754 |
+
tm.assert_almost_equal(
|
755 |
+
mgr.iget(0).internal_values(), reindexed.iget(2).internal_values()
|
756 |
+
)
|
757 |
+
tm.assert_almost_equal(
|
758 |
+
mgr.iget(3).internal_values(), reindexed.iget(3).internal_values()
|
759 |
+
)
|
760 |
+
|
761 |
+
def test_get_numeric_data(self, using_copy_on_write):
|
762 |
+
mgr = create_mgr(
|
763 |
+
"int: int; float: float; complex: complex;"
|
764 |
+
"str: object; bool: bool; obj: object; dt: datetime",
|
765 |
+
item_shape=(3,),
|
766 |
+
)
|
767 |
+
mgr.iset(5, np.array([1, 2, 3], dtype=np.object_))
|
768 |
+
|
769 |
+
numeric = mgr.get_numeric_data()
|
770 |
+
tm.assert_index_equal(numeric.items, Index(["int", "float", "complex", "bool"]))
|
771 |
+
tm.assert_almost_equal(
|
772 |
+
mgr.iget(mgr.items.get_loc("float")).internal_values(),
|
773 |
+
numeric.iget(numeric.items.get_loc("float")).internal_values(),
|
774 |
+
)
|
775 |
+
|
776 |
+
# Check sharing
|
777 |
+
numeric.iset(
|
778 |
+
numeric.items.get_loc("float"),
|
779 |
+
np.array([100.0, 200.0, 300.0]),
|
780 |
+
inplace=True,
|
781 |
+
)
|
782 |
+
if using_copy_on_write:
|
783 |
+
tm.assert_almost_equal(
|
784 |
+
mgr.iget(mgr.items.get_loc("float")).internal_values(),
|
785 |
+
np.array([1.0, 1.0, 1.0]),
|
786 |
+
)
|
787 |
+
else:
|
788 |
+
tm.assert_almost_equal(
|
789 |
+
mgr.iget(mgr.items.get_loc("float")).internal_values(),
|
790 |
+
np.array([100.0, 200.0, 300.0]),
|
791 |
+
)
|
792 |
+
|
793 |
+
def test_get_bool_data(self, using_copy_on_write):
|
794 |
+
mgr = create_mgr(
|
795 |
+
"int: int; float: float; complex: complex;"
|
796 |
+
"str: object; bool: bool; obj: object; dt: datetime",
|
797 |
+
item_shape=(3,),
|
798 |
+
)
|
799 |
+
mgr.iset(6, np.array([True, False, True], dtype=np.object_))
|
800 |
+
|
801 |
+
bools = mgr.get_bool_data()
|
802 |
+
tm.assert_index_equal(bools.items, Index(["bool"]))
|
803 |
+
tm.assert_almost_equal(
|
804 |
+
mgr.iget(mgr.items.get_loc("bool")).internal_values(),
|
805 |
+
bools.iget(bools.items.get_loc("bool")).internal_values(),
|
806 |
+
)
|
807 |
+
|
808 |
+
bools.iset(0, np.array([True, False, True]), inplace=True)
|
809 |
+
if using_copy_on_write:
|
810 |
+
tm.assert_numpy_array_equal(
|
811 |
+
mgr.iget(mgr.items.get_loc("bool")).internal_values(),
|
812 |
+
np.array([True, True, True]),
|
813 |
+
)
|
814 |
+
else:
|
815 |
+
tm.assert_numpy_array_equal(
|
816 |
+
mgr.iget(mgr.items.get_loc("bool")).internal_values(),
|
817 |
+
np.array([True, False, True]),
|
818 |
+
)
|
819 |
+
|
820 |
+
def test_unicode_repr_doesnt_raise(self):
|
821 |
+
repr(create_mgr("b,\u05d0: object"))
|
822 |
+
|
823 |
+
@pytest.mark.parametrize(
|
824 |
+
"mgr_string", ["a,b,c: i8-1; d,e,f: i8-2", "a,a,a: i8-1; b,b,b: i8-2"]
|
825 |
+
)
|
826 |
+
def test_equals(self, mgr_string):
|
827 |
+
# unique items
|
828 |
+
bm1 = create_mgr(mgr_string)
|
829 |
+
bm2 = BlockManager(bm1.blocks[::-1], bm1.axes)
|
830 |
+
assert bm1.equals(bm2)
|
831 |
+
|
832 |
+
@pytest.mark.parametrize(
|
833 |
+
"mgr_string",
|
834 |
+
[
|
835 |
+
"a:i8;b:f8", # basic case
|
836 |
+
"a:i8;b:f8;c:c8;d:b", # many types
|
837 |
+
"a:i8;e:dt;f:td;g:string", # more types
|
838 |
+
"a:i8;b:category;c:category2", # categories
|
839 |
+
"c:sparse;d:sparse_na;b:f8", # sparse
|
840 |
+
],
|
841 |
+
)
|
842 |
+
def test_equals_block_order_different_dtypes(self, mgr_string):
|
843 |
+
# GH 9330
|
844 |
+
bm = create_mgr(mgr_string)
|
845 |
+
block_perms = itertools.permutations(bm.blocks)
|
846 |
+
for bm_perm in block_perms:
|
847 |
+
bm_this = BlockManager(tuple(bm_perm), bm.axes)
|
848 |
+
assert bm.equals(bm_this)
|
849 |
+
assert bm_this.equals(bm)
|
850 |
+
|
851 |
+
def test_single_mgr_ctor(self):
|
852 |
+
mgr = create_single_mgr("f8", num_rows=5)
|
853 |
+
assert mgr.external_values().tolist() == [0.0, 1.0, 2.0, 3.0, 4.0]
|
854 |
+
|
855 |
+
@pytest.mark.parametrize("value", [1, "True", [1, 2, 3], 5.0])
|
856 |
+
def test_validate_bool_args(self, value):
|
857 |
+
bm1 = create_mgr("a,b,c: i8-1; d,e,f: i8-2")
|
858 |
+
|
859 |
+
msg = (
|
860 |
+
'For argument "inplace" expected type bool, '
|
861 |
+
f"received type {type(value).__name__}."
|
862 |
+
)
|
863 |
+
with pytest.raises(ValueError, match=msg):
|
864 |
+
bm1.replace_list([1], [2], inplace=value)
|
865 |
+
|
866 |
+
def test_iset_split_block(self):
|
867 |
+
bm = create_mgr("a,b,c: i8; d: f8")
|
868 |
+
bm._iset_split_block(0, np.array([0]))
|
869 |
+
tm.assert_numpy_array_equal(
|
870 |
+
bm.blklocs, np.array([0, 0, 1, 0], dtype="int64" if IS64 else "int32")
|
871 |
+
)
|
872 |
+
# First indexer currently does not have a block associated with it in case
|
873 |
+
tm.assert_numpy_array_equal(
|
874 |
+
bm.blknos, np.array([0, 0, 0, 1], dtype="int64" if IS64 else "int32")
|
875 |
+
)
|
876 |
+
assert len(bm.blocks) == 2
|
877 |
+
|
878 |
+
def test_iset_split_block_values(self):
|
879 |
+
bm = create_mgr("a,b,c: i8; d: f8")
|
880 |
+
bm._iset_split_block(0, np.array([0]), np.array([list(range(10))]))
|
881 |
+
tm.assert_numpy_array_equal(
|
882 |
+
bm.blklocs, np.array([0, 0, 1, 0], dtype="int64" if IS64 else "int32")
|
883 |
+
)
|
884 |
+
# First indexer currently does not have a block associated with it in case
|
885 |
+
tm.assert_numpy_array_equal(
|
886 |
+
bm.blknos, np.array([0, 2, 2, 1], dtype="int64" if IS64 else "int32")
|
887 |
+
)
|
888 |
+
assert len(bm.blocks) == 3
|
889 |
+
|
890 |
+
|
891 |
+
def _as_array(mgr):
|
892 |
+
if mgr.ndim == 1:
|
893 |
+
return mgr.external_values()
|
894 |
+
return mgr.as_array().T
|
895 |
+
|
896 |
+
|
897 |
+
class TestIndexing:
|
898 |
+
# Nosetests-style data-driven tests.
|
899 |
+
#
|
900 |
+
# This test applies different indexing routines to block managers and
|
901 |
+
# compares the outcome to the result of same operations on np.ndarray.
|
902 |
+
#
|
903 |
+
# NOTE: sparse (SparseBlock with fill_value != np.nan) fail a lot of tests
|
904 |
+
# and are disabled.
|
905 |
+
|
906 |
+
MANAGERS = [
|
907 |
+
create_single_mgr("f8", N),
|
908 |
+
create_single_mgr("i8", N),
|
909 |
+
# 2-dim
|
910 |
+
create_mgr("a,b,c,d,e,f: f8", item_shape=(N,)),
|
911 |
+
create_mgr("a,b,c,d,e,f: i8", item_shape=(N,)),
|
912 |
+
create_mgr("a,b: f8; c,d: i8; e,f: string", item_shape=(N,)),
|
913 |
+
create_mgr("a,b: f8; c,d: i8; e,f: f8", item_shape=(N,)),
|
914 |
+
]
|
915 |
+
|
916 |
+
@pytest.mark.parametrize("mgr", MANAGERS)
|
917 |
+
def test_get_slice(self, mgr):
|
918 |
+
def assert_slice_ok(mgr, axis, slobj):
|
919 |
+
mat = _as_array(mgr)
|
920 |
+
|
921 |
+
# we maybe using an ndarray to test slicing and
|
922 |
+
# might not be the full length of the axis
|
923 |
+
if isinstance(slobj, np.ndarray):
|
924 |
+
ax = mgr.axes[axis]
|
925 |
+
if len(ax) and len(slobj) and len(slobj) != len(ax):
|
926 |
+
slobj = np.concatenate(
|
927 |
+
[slobj, np.zeros(len(ax) - len(slobj), dtype=bool)]
|
928 |
+
)
|
929 |
+
|
930 |
+
if isinstance(slobj, slice):
|
931 |
+
sliced = mgr.get_slice(slobj, axis=axis)
|
932 |
+
elif (
|
933 |
+
mgr.ndim == 1
|
934 |
+
and axis == 0
|
935 |
+
and isinstance(slobj, np.ndarray)
|
936 |
+
and slobj.dtype == bool
|
937 |
+
):
|
938 |
+
sliced = mgr.get_rows_with_mask(slobj)
|
939 |
+
else:
|
940 |
+
# BlockManager doesn't support non-slice, SingleBlockManager
|
941 |
+
# doesn't support axis > 0
|
942 |
+
raise TypeError(slobj)
|
943 |
+
|
944 |
+
mat_slobj = (slice(None),) * axis + (slobj,)
|
945 |
+
tm.assert_numpy_array_equal(
|
946 |
+
mat[mat_slobj], _as_array(sliced), check_dtype=False
|
947 |
+
)
|
948 |
+
tm.assert_index_equal(mgr.axes[axis][slobj], sliced.axes[axis])
|
949 |
+
|
950 |
+
assert mgr.ndim <= 2, mgr.ndim
|
951 |
+
for ax in range(mgr.ndim):
|
952 |
+
# slice
|
953 |
+
assert_slice_ok(mgr, ax, slice(None))
|
954 |
+
assert_slice_ok(mgr, ax, slice(3))
|
955 |
+
assert_slice_ok(mgr, ax, slice(100))
|
956 |
+
assert_slice_ok(mgr, ax, slice(1, 4))
|
957 |
+
assert_slice_ok(mgr, ax, slice(3, 0, -2))
|
958 |
+
|
959 |
+
if mgr.ndim < 2:
|
960 |
+
# 2D only support slice objects
|
961 |
+
|
962 |
+
# boolean mask
|
963 |
+
assert_slice_ok(mgr, ax, np.ones(mgr.shape[ax], dtype=np.bool_))
|
964 |
+
assert_slice_ok(mgr, ax, np.zeros(mgr.shape[ax], dtype=np.bool_))
|
965 |
+
|
966 |
+
if mgr.shape[ax] >= 3:
|
967 |
+
assert_slice_ok(mgr, ax, np.arange(mgr.shape[ax]) % 3 == 0)
|
968 |
+
assert_slice_ok(
|
969 |
+
mgr, ax, np.array([True, True, False], dtype=np.bool_)
|
970 |
+
)
|
971 |
+
|
972 |
+
@pytest.mark.parametrize("mgr", MANAGERS)
|
973 |
+
def test_take(self, mgr):
|
974 |
+
def assert_take_ok(mgr, axis, indexer):
|
975 |
+
mat = _as_array(mgr)
|
976 |
+
taken = mgr.take(indexer, axis)
|
977 |
+
tm.assert_numpy_array_equal(
|
978 |
+
np.take(mat, indexer, axis), _as_array(taken), check_dtype=False
|
979 |
+
)
|
980 |
+
tm.assert_index_equal(mgr.axes[axis].take(indexer), taken.axes[axis])
|
981 |
+
|
982 |
+
for ax in range(mgr.ndim):
|
983 |
+
# take/fancy indexer
|
984 |
+
assert_take_ok(mgr, ax, indexer=np.array([], dtype=np.intp))
|
985 |
+
assert_take_ok(mgr, ax, indexer=np.array([0, 0, 0], dtype=np.intp))
|
986 |
+
assert_take_ok(
|
987 |
+
mgr, ax, indexer=np.array(list(range(mgr.shape[ax])), dtype=np.intp)
|
988 |
+
)
|
989 |
+
|
990 |
+
if mgr.shape[ax] >= 3:
|
991 |
+
assert_take_ok(mgr, ax, indexer=np.array([0, 1, 2], dtype=np.intp))
|
992 |
+
assert_take_ok(mgr, ax, indexer=np.array([-1, -2, -3], dtype=np.intp))
|
993 |
+
|
994 |
+
@pytest.mark.parametrize("mgr", MANAGERS)
|
995 |
+
@pytest.mark.parametrize("fill_value", [None, np.nan, 100.0])
|
996 |
+
def test_reindex_axis(self, fill_value, mgr):
|
997 |
+
def assert_reindex_axis_is_ok(mgr, axis, new_labels, fill_value):
|
998 |
+
mat = _as_array(mgr)
|
999 |
+
indexer = mgr.axes[axis].get_indexer_for(new_labels)
|
1000 |
+
|
1001 |
+
reindexed = mgr.reindex_axis(new_labels, axis, fill_value=fill_value)
|
1002 |
+
tm.assert_numpy_array_equal(
|
1003 |
+
algos.take_nd(mat, indexer, axis, fill_value=fill_value),
|
1004 |
+
_as_array(reindexed),
|
1005 |
+
check_dtype=False,
|
1006 |
+
)
|
1007 |
+
tm.assert_index_equal(reindexed.axes[axis], new_labels)
|
1008 |
+
|
1009 |
+
for ax in range(mgr.ndim):
|
1010 |
+
assert_reindex_axis_is_ok(mgr, ax, Index([]), fill_value)
|
1011 |
+
assert_reindex_axis_is_ok(mgr, ax, mgr.axes[ax], fill_value)
|
1012 |
+
assert_reindex_axis_is_ok(mgr, ax, mgr.axes[ax][[0, 0, 0]], fill_value)
|
1013 |
+
assert_reindex_axis_is_ok(mgr, ax, Index(["foo", "bar", "baz"]), fill_value)
|
1014 |
+
assert_reindex_axis_is_ok(
|
1015 |
+
mgr, ax, Index(["foo", mgr.axes[ax][0], "baz"]), fill_value
|
1016 |
+
)
|
1017 |
+
|
1018 |
+
if mgr.shape[ax] >= 3:
|
1019 |
+
assert_reindex_axis_is_ok(mgr, ax, mgr.axes[ax][:-3], fill_value)
|
1020 |
+
assert_reindex_axis_is_ok(mgr, ax, mgr.axes[ax][-3::-1], fill_value)
|
1021 |
+
assert_reindex_axis_is_ok(
|
1022 |
+
mgr, ax, mgr.axes[ax][[0, 1, 2, 0, 1, 2]], fill_value
|
1023 |
+
)
|
1024 |
+
|
1025 |
+
@pytest.mark.parametrize("mgr", MANAGERS)
|
1026 |
+
@pytest.mark.parametrize("fill_value", [None, np.nan, 100.0])
|
1027 |
+
def test_reindex_indexer(self, fill_value, mgr):
|
1028 |
+
def assert_reindex_indexer_is_ok(mgr, axis, new_labels, indexer, fill_value):
|
1029 |
+
mat = _as_array(mgr)
|
1030 |
+
reindexed_mat = algos.take_nd(mat, indexer, axis, fill_value=fill_value)
|
1031 |
+
reindexed = mgr.reindex_indexer(
|
1032 |
+
new_labels, indexer, axis, fill_value=fill_value
|
1033 |
+
)
|
1034 |
+
tm.assert_numpy_array_equal(
|
1035 |
+
reindexed_mat, _as_array(reindexed), check_dtype=False
|
1036 |
+
)
|
1037 |
+
tm.assert_index_equal(reindexed.axes[axis], new_labels)
|
1038 |
+
|
1039 |
+
for ax in range(mgr.ndim):
|
1040 |
+
assert_reindex_indexer_is_ok(
|
1041 |
+
mgr, ax, Index([]), np.array([], dtype=np.intp), fill_value
|
1042 |
+
)
|
1043 |
+
assert_reindex_indexer_is_ok(
|
1044 |
+
mgr, ax, mgr.axes[ax], np.arange(mgr.shape[ax]), fill_value
|
1045 |
+
)
|
1046 |
+
assert_reindex_indexer_is_ok(
|
1047 |
+
mgr,
|
1048 |
+
ax,
|
1049 |
+
Index(["foo"] * mgr.shape[ax]),
|
1050 |
+
np.arange(mgr.shape[ax]),
|
1051 |
+
fill_value,
|
1052 |
+
)
|
1053 |
+
assert_reindex_indexer_is_ok(
|
1054 |
+
mgr, ax, mgr.axes[ax][::-1], np.arange(mgr.shape[ax]), fill_value
|
1055 |
+
)
|
1056 |
+
assert_reindex_indexer_is_ok(
|
1057 |
+
mgr, ax, mgr.axes[ax], np.arange(mgr.shape[ax])[::-1], fill_value
|
1058 |
+
)
|
1059 |
+
assert_reindex_indexer_is_ok(
|
1060 |
+
mgr, ax, Index(["foo", "bar", "baz"]), np.array([0, 0, 0]), fill_value
|
1061 |
+
)
|
1062 |
+
assert_reindex_indexer_is_ok(
|
1063 |
+
mgr, ax, Index(["foo", "bar", "baz"]), np.array([-1, 0, -1]), fill_value
|
1064 |
+
)
|
1065 |
+
assert_reindex_indexer_is_ok(
|
1066 |
+
mgr,
|
1067 |
+
ax,
|
1068 |
+
Index(["foo", mgr.axes[ax][0], "baz"]),
|
1069 |
+
np.array([-1, -1, -1]),
|
1070 |
+
fill_value,
|
1071 |
+
)
|
1072 |
+
|
1073 |
+
if mgr.shape[ax] >= 3:
|
1074 |
+
assert_reindex_indexer_is_ok(
|
1075 |
+
mgr,
|
1076 |
+
ax,
|
1077 |
+
Index(["foo", "bar", "baz"]),
|
1078 |
+
np.array([0, 1, 2]),
|
1079 |
+
fill_value,
|
1080 |
+
)
|
1081 |
+
|
1082 |
+
|
1083 |
+
class TestBlockPlacement:
|
1084 |
+
@pytest.mark.parametrize(
|
1085 |
+
"slc, expected",
|
1086 |
+
[
|
1087 |
+
(slice(0, 4), 4),
|
1088 |
+
(slice(0, 4, 2), 2),
|
1089 |
+
(slice(0, 3, 2), 2),
|
1090 |
+
(slice(0, 1, 2), 1),
|
1091 |
+
(slice(1, 0, -1), 1),
|
1092 |
+
],
|
1093 |
+
)
|
1094 |
+
def test_slice_len(self, slc, expected):
|
1095 |
+
assert len(BlockPlacement(slc)) == expected
|
1096 |
+
|
1097 |
+
@pytest.mark.parametrize("slc", [slice(1, 1, 0), slice(1, 2, 0)])
|
1098 |
+
def test_zero_step_raises(self, slc):
|
1099 |
+
msg = "slice step cannot be zero"
|
1100 |
+
with pytest.raises(ValueError, match=msg):
|
1101 |
+
BlockPlacement(slc)
|
1102 |
+
|
1103 |
+
def test_slice_canonize_negative_stop(self):
|
1104 |
+
# GH#37524 negative stop is OK with negative step and positive start
|
1105 |
+
slc = slice(3, -1, -2)
|
1106 |
+
|
1107 |
+
bp = BlockPlacement(slc)
|
1108 |
+
assert bp.indexer == slice(3, None, -2)
|
1109 |
+
|
1110 |
+
@pytest.mark.parametrize(
|
1111 |
+
"slc",
|
1112 |
+
[
|
1113 |
+
slice(None, None),
|
1114 |
+
slice(10, None),
|
1115 |
+
slice(None, None, -1),
|
1116 |
+
slice(None, 10, -1),
|
1117 |
+
# These are "unbounded" because negative index will
|
1118 |
+
# change depending on container shape.
|
1119 |
+
slice(-1, None),
|
1120 |
+
slice(None, -1),
|
1121 |
+
slice(-1, -1),
|
1122 |
+
slice(-1, None, -1),
|
1123 |
+
slice(None, -1, -1),
|
1124 |
+
slice(-1, -1, -1),
|
1125 |
+
],
|
1126 |
+
)
|
1127 |
+
def test_unbounded_slice_raises(self, slc):
|
1128 |
+
msg = "unbounded slice"
|
1129 |
+
with pytest.raises(ValueError, match=msg):
|
1130 |
+
BlockPlacement(slc)
|
1131 |
+
|
1132 |
+
@pytest.mark.parametrize(
|
1133 |
+
"slc",
|
1134 |
+
[
|
1135 |
+
slice(0, 0),
|
1136 |
+
slice(100, 0),
|
1137 |
+
slice(100, 100),
|
1138 |
+
slice(100, 100, -1),
|
1139 |
+
slice(0, 100, -1),
|
1140 |
+
],
|
1141 |
+
)
|
1142 |
+
def test_not_slice_like_slices(self, slc):
|
1143 |
+
assert not BlockPlacement(slc).is_slice_like
|
1144 |
+
|
1145 |
+
@pytest.mark.parametrize(
|
1146 |
+
"arr, slc",
|
1147 |
+
[
|
1148 |
+
([0], slice(0, 1, 1)),
|
1149 |
+
([100], slice(100, 101, 1)),
|
1150 |
+
([0, 1, 2], slice(0, 3, 1)),
|
1151 |
+
([0, 5, 10], slice(0, 15, 5)),
|
1152 |
+
([0, 100], slice(0, 200, 100)),
|
1153 |
+
([2, 1], slice(2, 0, -1)),
|
1154 |
+
],
|
1155 |
+
)
|
1156 |
+
def test_array_to_slice_conversion(self, arr, slc):
|
1157 |
+
assert BlockPlacement(arr).as_slice == slc
|
1158 |
+
|
1159 |
+
@pytest.mark.parametrize(
|
1160 |
+
"arr",
|
1161 |
+
[
|
1162 |
+
[],
|
1163 |
+
[-1],
|
1164 |
+
[-1, -2, -3],
|
1165 |
+
[-10],
|
1166 |
+
[-1],
|
1167 |
+
[-1, 0, 1, 2],
|
1168 |
+
[-2, 0, 2, 4],
|
1169 |
+
[1, 0, -1],
|
1170 |
+
[1, 1, 1],
|
1171 |
+
],
|
1172 |
+
)
|
1173 |
+
def test_not_slice_like_arrays(self, arr):
|
1174 |
+
assert not BlockPlacement(arr).is_slice_like
|
1175 |
+
|
1176 |
+
@pytest.mark.parametrize(
|
1177 |
+
"slc, expected",
|
1178 |
+
[(slice(0, 3), [0, 1, 2]), (slice(0, 0), []), (slice(3, 0), [])],
|
1179 |
+
)
|
1180 |
+
def test_slice_iter(self, slc, expected):
|
1181 |
+
assert list(BlockPlacement(slc)) == expected
|
1182 |
+
|
1183 |
+
@pytest.mark.parametrize(
|
1184 |
+
"slc, arr",
|
1185 |
+
[
|
1186 |
+
(slice(0, 3), [0, 1, 2]),
|
1187 |
+
(slice(0, 0), []),
|
1188 |
+
(slice(3, 0), []),
|
1189 |
+
(slice(3, 0, -1), [3, 2, 1]),
|
1190 |
+
],
|
1191 |
+
)
|
1192 |
+
def test_slice_to_array_conversion(self, slc, arr):
|
1193 |
+
tm.assert_numpy_array_equal(
|
1194 |
+
BlockPlacement(slc).as_array, np.asarray(arr, dtype=np.intp)
|
1195 |
+
)
|
1196 |
+
|
1197 |
+
def test_blockplacement_add(self):
|
1198 |
+
bpl = BlockPlacement(slice(0, 5))
|
1199 |
+
assert bpl.add(1).as_slice == slice(1, 6, 1)
|
1200 |
+
assert bpl.add(np.arange(5)).as_slice == slice(0, 10, 2)
|
1201 |
+
assert list(bpl.add(np.arange(5, 0, -1))) == [5, 5, 5, 5, 5]
|
1202 |
+
|
1203 |
+
@pytest.mark.parametrize(
|
1204 |
+
"val, inc, expected",
|
1205 |
+
[
|
1206 |
+
(slice(0, 0), 0, []),
|
1207 |
+
(slice(1, 4), 0, [1, 2, 3]),
|
1208 |
+
(slice(3, 0, -1), 0, [3, 2, 1]),
|
1209 |
+
([1, 2, 4], 0, [1, 2, 4]),
|
1210 |
+
(slice(0, 0), 10, []),
|
1211 |
+
(slice(1, 4), 10, [11, 12, 13]),
|
1212 |
+
(slice(3, 0, -1), 10, [13, 12, 11]),
|
1213 |
+
([1, 2, 4], 10, [11, 12, 14]),
|
1214 |
+
(slice(0, 0), -1, []),
|
1215 |
+
(slice(1, 4), -1, [0, 1, 2]),
|
1216 |
+
([1, 2, 4], -1, [0, 1, 3]),
|
1217 |
+
],
|
1218 |
+
)
|
1219 |
+
def test_blockplacement_add_int(self, val, inc, expected):
|
1220 |
+
assert list(BlockPlacement(val).add(inc)) == expected
|
1221 |
+
|
1222 |
+
@pytest.mark.parametrize("val", [slice(1, 4), [1, 2, 4]])
|
1223 |
+
def test_blockplacement_add_int_raises(self, val):
|
1224 |
+
msg = "iadd causes length change"
|
1225 |
+
with pytest.raises(ValueError, match=msg):
|
1226 |
+
BlockPlacement(val).add(-10)
|
1227 |
+
|
1228 |
+
|
1229 |
+
class TestCanHoldElement:
|
1230 |
+
@pytest.fixture(
|
1231 |
+
params=[
|
1232 |
+
lambda x: x,
|
1233 |
+
lambda x: x.to_series(),
|
1234 |
+
lambda x: x._data,
|
1235 |
+
lambda x: list(x),
|
1236 |
+
lambda x: x.astype(object),
|
1237 |
+
lambda x: np.asarray(x),
|
1238 |
+
lambda x: x[0],
|
1239 |
+
lambda x: x[:0],
|
1240 |
+
]
|
1241 |
+
)
|
1242 |
+
def element(self, request):
|
1243 |
+
"""
|
1244 |
+
Functions that take an Index and return an element that should have
|
1245 |
+
blk._can_hold_element(element) for a Block with this index's dtype.
|
1246 |
+
"""
|
1247 |
+
return request.param
|
1248 |
+
|
1249 |
+
def test_datetime_block_can_hold_element(self):
|
1250 |
+
block = create_block("datetime", [0])
|
1251 |
+
|
1252 |
+
assert block._can_hold_element([])
|
1253 |
+
|
1254 |
+
# We will check that block._can_hold_element iff arr.__setitem__ works
|
1255 |
+
arr = pd.array(block.values.ravel())
|
1256 |
+
|
1257 |
+
# coerce None
|
1258 |
+
assert block._can_hold_element(None)
|
1259 |
+
arr[0] = None
|
1260 |
+
assert arr[0] is pd.NaT
|
1261 |
+
|
1262 |
+
# coerce different types of datetime objects
|
1263 |
+
vals = [np.datetime64("2010-10-10"), datetime(2010, 10, 10)]
|
1264 |
+
for val in vals:
|
1265 |
+
assert block._can_hold_element(val)
|
1266 |
+
arr[0] = val
|
1267 |
+
|
1268 |
+
val = date(2010, 10, 10)
|
1269 |
+
assert not block._can_hold_element(val)
|
1270 |
+
|
1271 |
+
msg = (
|
1272 |
+
"value should be a 'Timestamp', 'NaT', "
|
1273 |
+
"or array of those. Got 'date' instead."
|
1274 |
+
)
|
1275 |
+
with pytest.raises(TypeError, match=msg):
|
1276 |
+
arr[0] = val
|
1277 |
+
|
1278 |
+
@pytest.mark.parametrize("dtype", [np.int64, np.uint64, np.float64])
|
1279 |
+
def test_interval_can_hold_element_emptylist(self, dtype, element):
|
1280 |
+
arr = np.array([1, 3, 4], dtype=dtype)
|
1281 |
+
ii = IntervalIndex.from_breaks(arr)
|
1282 |
+
blk = new_block(ii._data, BlockPlacement([1]), ndim=2)
|
1283 |
+
|
1284 |
+
assert blk._can_hold_element([])
|
1285 |
+
# TODO: check this holds for all blocks
|
1286 |
+
|
1287 |
+
@pytest.mark.parametrize("dtype", [np.int64, np.uint64, np.float64])
|
1288 |
+
def test_interval_can_hold_element(self, dtype, element):
|
1289 |
+
arr = np.array([1, 3, 4, 9], dtype=dtype)
|
1290 |
+
ii = IntervalIndex.from_breaks(arr)
|
1291 |
+
blk = new_block(ii._data, BlockPlacement([1]), ndim=2)
|
1292 |
+
|
1293 |
+
elem = element(ii)
|
1294 |
+
self.check_series_setitem(elem, ii, True)
|
1295 |
+
assert blk._can_hold_element(elem)
|
1296 |
+
|
1297 |
+
# Careful: to get the expected Series-inplace behavior we need
|
1298 |
+
# `elem` to not have the same length as `arr`
|
1299 |
+
ii2 = IntervalIndex.from_breaks(arr[:-1], closed="neither")
|
1300 |
+
elem = element(ii2)
|
1301 |
+
with tm.assert_produces_warning(FutureWarning):
|
1302 |
+
self.check_series_setitem(elem, ii, False)
|
1303 |
+
assert not blk._can_hold_element(elem)
|
1304 |
+
|
1305 |
+
ii3 = IntervalIndex.from_breaks([Timestamp(1), Timestamp(3), Timestamp(4)])
|
1306 |
+
elem = element(ii3)
|
1307 |
+
with tm.assert_produces_warning(FutureWarning):
|
1308 |
+
self.check_series_setitem(elem, ii, False)
|
1309 |
+
assert not blk._can_hold_element(elem)
|
1310 |
+
|
1311 |
+
ii4 = IntervalIndex.from_breaks([Timedelta(1), Timedelta(3), Timedelta(4)])
|
1312 |
+
elem = element(ii4)
|
1313 |
+
with tm.assert_produces_warning(FutureWarning):
|
1314 |
+
self.check_series_setitem(elem, ii, False)
|
1315 |
+
assert not blk._can_hold_element(elem)
|
1316 |
+
|
1317 |
+
def test_period_can_hold_element_emptylist(self):
|
1318 |
+
pi = period_range("2016", periods=3, freq="Y")
|
1319 |
+
blk = new_block(pi._data.reshape(1, 3), BlockPlacement([1]), ndim=2)
|
1320 |
+
|
1321 |
+
assert blk._can_hold_element([])
|
1322 |
+
|
1323 |
+
def test_period_can_hold_element(self, element):
|
1324 |
+
pi = period_range("2016", periods=3, freq="Y")
|
1325 |
+
|
1326 |
+
elem = element(pi)
|
1327 |
+
self.check_series_setitem(elem, pi, True)
|
1328 |
+
|
1329 |
+
# Careful: to get the expected Series-inplace behavior we need
|
1330 |
+
# `elem` to not have the same length as `arr`
|
1331 |
+
pi2 = pi.asfreq("D")[:-1]
|
1332 |
+
elem = element(pi2)
|
1333 |
+
with tm.assert_produces_warning(FutureWarning):
|
1334 |
+
self.check_series_setitem(elem, pi, False)
|
1335 |
+
|
1336 |
+
dti = pi.to_timestamp("s")[:-1]
|
1337 |
+
elem = element(dti)
|
1338 |
+
with tm.assert_produces_warning(FutureWarning):
|
1339 |
+
self.check_series_setitem(elem, pi, False)
|
1340 |
+
|
1341 |
+
def check_can_hold_element(self, obj, elem, inplace: bool):
|
1342 |
+
blk = obj._mgr.blocks[0]
|
1343 |
+
if inplace:
|
1344 |
+
assert blk._can_hold_element(elem)
|
1345 |
+
else:
|
1346 |
+
assert not blk._can_hold_element(elem)
|
1347 |
+
|
1348 |
+
def check_series_setitem(self, elem, index: Index, inplace: bool):
|
1349 |
+
arr = index._data.copy()
|
1350 |
+
ser = Series(arr, copy=False)
|
1351 |
+
|
1352 |
+
self.check_can_hold_element(ser, elem, inplace)
|
1353 |
+
|
1354 |
+
if is_scalar(elem):
|
1355 |
+
ser[0] = elem
|
1356 |
+
else:
|
1357 |
+
ser[: len(elem)] = elem
|
1358 |
+
|
1359 |
+
if inplace:
|
1360 |
+
assert ser.array is arr # i.e. setting was done inplace
|
1361 |
+
else:
|
1362 |
+
assert ser.dtype == object
|
1363 |
+
|
1364 |
+
|
1365 |
+
class TestShouldStore:
|
1366 |
+
def test_should_store_categorical(self):
|
1367 |
+
cat = Categorical(["A", "B", "C"])
|
1368 |
+
df = DataFrame(cat)
|
1369 |
+
blk = df._mgr.blocks[0]
|
1370 |
+
|
1371 |
+
# matching dtype
|
1372 |
+
assert blk.should_store(cat)
|
1373 |
+
assert blk.should_store(cat[:-1])
|
1374 |
+
|
1375 |
+
# different dtype
|
1376 |
+
assert not blk.should_store(cat.as_ordered())
|
1377 |
+
|
1378 |
+
# ndarray instead of Categorical
|
1379 |
+
assert not blk.should_store(np.asarray(cat))
|
1380 |
+
|
1381 |
+
|
1382 |
+
def test_validate_ndim():
|
1383 |
+
values = np.array([1.0, 2.0])
|
1384 |
+
placement = BlockPlacement(slice(2))
|
1385 |
+
msg = r"Wrong number of dimensions. values.ndim != ndim \[1 != 2\]"
|
1386 |
+
|
1387 |
+
with pytest.raises(ValueError, match=msg):
|
1388 |
+
make_block(values, placement, ndim=2)
|
1389 |
+
|
1390 |
+
|
1391 |
+
def test_block_shape():
|
1392 |
+
idx = Index([0, 1, 2, 3, 4])
|
1393 |
+
a = Series([1, 2, 3]).reindex(idx)
|
1394 |
+
b = Series(Categorical([1, 2, 3])).reindex(idx)
|
1395 |
+
|
1396 |
+
assert a._mgr.blocks[0].mgr_locs.indexer == b._mgr.blocks[0].mgr_locs.indexer
|
1397 |
+
|
1398 |
+
|
1399 |
+
def test_make_block_no_pandas_array(block_maker):
|
1400 |
+
# https://github.com/pandas-dev/pandas/pull/24866
|
1401 |
+
arr = pd.arrays.NumpyExtensionArray(np.array([1, 2]))
|
1402 |
+
|
1403 |
+
# NumpyExtensionArray, no dtype
|
1404 |
+
result = block_maker(arr, BlockPlacement(slice(len(arr))), ndim=arr.ndim)
|
1405 |
+
assert result.dtype.kind in ["i", "u"]
|
1406 |
+
|
1407 |
+
if block_maker is make_block:
|
1408 |
+
# new_block requires caller to unwrap NumpyExtensionArray
|
1409 |
+
assert result.is_extension is False
|
1410 |
+
|
1411 |
+
# NumpyExtensionArray, NumpyEADtype
|
1412 |
+
result = block_maker(arr, slice(len(arr)), dtype=arr.dtype, ndim=arr.ndim)
|
1413 |
+
assert result.dtype.kind in ["i", "u"]
|
1414 |
+
assert result.is_extension is False
|
1415 |
+
|
1416 |
+
# new_block no longer taked dtype keyword
|
1417 |
+
# ndarray, NumpyEADtype
|
1418 |
+
result = block_maker(
|
1419 |
+
arr.to_numpy(), slice(len(arr)), dtype=arr.dtype, ndim=arr.ndim
|
1420 |
+
)
|
1421 |
+
assert result.dtype.kind in ["i", "u"]
|
1422 |
+
assert result.is_extension is False
|
venv/lib/python3.10/site-packages/pandas/tests/internals/test_managers.py
ADDED
@@ -0,0 +1,103 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1 |
+
"""
|
2 |
+
Testing interaction between the different managers (BlockManager, ArrayManager)
|
3 |
+
"""
|
4 |
+
import os
|
5 |
+
import subprocess
|
6 |
+
import sys
|
7 |
+
|
8 |
+
import pytest
|
9 |
+
|
10 |
+
from pandas.core.dtypes.missing import array_equivalent
|
11 |
+
|
12 |
+
import pandas as pd
|
13 |
+
import pandas._testing as tm
|
14 |
+
from pandas.core.internals import (
|
15 |
+
ArrayManager,
|
16 |
+
BlockManager,
|
17 |
+
SingleArrayManager,
|
18 |
+
SingleBlockManager,
|
19 |
+
)
|
20 |
+
|
21 |
+
|
22 |
+
def test_dataframe_creation():
|
23 |
+
msg = "data_manager option is deprecated"
|
24 |
+
with tm.assert_produces_warning(FutureWarning, match=msg):
|
25 |
+
with pd.option_context("mode.data_manager", "block"):
|
26 |
+
df_block = pd.DataFrame(
|
27 |
+
{"a": [1, 2, 3], "b": [0.1, 0.2, 0.3], "c": [4, 5, 6]}
|
28 |
+
)
|
29 |
+
assert isinstance(df_block._mgr, BlockManager)
|
30 |
+
|
31 |
+
with tm.assert_produces_warning(FutureWarning, match=msg):
|
32 |
+
with pd.option_context("mode.data_manager", "array"):
|
33 |
+
df_array = pd.DataFrame(
|
34 |
+
{"a": [1, 2, 3], "b": [0.1, 0.2, 0.3], "c": [4, 5, 6]}
|
35 |
+
)
|
36 |
+
assert isinstance(df_array._mgr, ArrayManager)
|
37 |
+
|
38 |
+
# also ensure both are seen as equal
|
39 |
+
tm.assert_frame_equal(df_block, df_array)
|
40 |
+
|
41 |
+
# conversion from one manager to the other
|
42 |
+
result = df_block._as_manager("block")
|
43 |
+
assert isinstance(result._mgr, BlockManager)
|
44 |
+
result = df_block._as_manager("array")
|
45 |
+
assert isinstance(result._mgr, ArrayManager)
|
46 |
+
tm.assert_frame_equal(result, df_block)
|
47 |
+
assert all(
|
48 |
+
array_equivalent(left, right)
|
49 |
+
for left, right in zip(result._mgr.arrays, df_array._mgr.arrays)
|
50 |
+
)
|
51 |
+
|
52 |
+
result = df_array._as_manager("array")
|
53 |
+
assert isinstance(result._mgr, ArrayManager)
|
54 |
+
result = df_array._as_manager("block")
|
55 |
+
assert isinstance(result._mgr, BlockManager)
|
56 |
+
tm.assert_frame_equal(result, df_array)
|
57 |
+
assert len(result._mgr.blocks) == 2
|
58 |
+
|
59 |
+
|
60 |
+
def test_series_creation():
|
61 |
+
msg = "data_manager option is deprecated"
|
62 |
+
with tm.assert_produces_warning(FutureWarning, match=msg):
|
63 |
+
with pd.option_context("mode.data_manager", "block"):
|
64 |
+
s_block = pd.Series([1, 2, 3], name="A", index=["a", "b", "c"])
|
65 |
+
assert isinstance(s_block._mgr, SingleBlockManager)
|
66 |
+
|
67 |
+
with tm.assert_produces_warning(FutureWarning, match=msg):
|
68 |
+
with pd.option_context("mode.data_manager", "array"):
|
69 |
+
s_array = pd.Series([1, 2, 3], name="A", index=["a", "b", "c"])
|
70 |
+
assert isinstance(s_array._mgr, SingleArrayManager)
|
71 |
+
|
72 |
+
# also ensure both are seen as equal
|
73 |
+
tm.assert_series_equal(s_block, s_array)
|
74 |
+
|
75 |
+
# conversion from one manager to the other
|
76 |
+
result = s_block._as_manager("block")
|
77 |
+
assert isinstance(result._mgr, SingleBlockManager)
|
78 |
+
result = s_block._as_manager("array")
|
79 |
+
assert isinstance(result._mgr, SingleArrayManager)
|
80 |
+
tm.assert_series_equal(result, s_block)
|
81 |
+
|
82 |
+
result = s_array._as_manager("array")
|
83 |
+
assert isinstance(result._mgr, SingleArrayManager)
|
84 |
+
result = s_array._as_manager("block")
|
85 |
+
assert isinstance(result._mgr, SingleBlockManager)
|
86 |
+
tm.assert_series_equal(result, s_array)
|
87 |
+
|
88 |
+
|
89 |
+
@pytest.mark.single_cpu
|
90 |
+
@pytest.mark.parametrize("manager", ["block", "array"])
|
91 |
+
def test_array_manager_depr_env_var(manager):
|
92 |
+
# GH#55043
|
93 |
+
test_env = os.environ.copy()
|
94 |
+
test_env["PANDAS_DATA_MANAGER"] = manager
|
95 |
+
response = subprocess.run(
|
96 |
+
[sys.executable, "-c", "import pandas"],
|
97 |
+
capture_output=True,
|
98 |
+
env=test_env,
|
99 |
+
check=True,
|
100 |
+
)
|
101 |
+
msg = "FutureWarning: The env variable PANDAS_DATA_MANAGER is set"
|
102 |
+
stderr_msg = response.stderr.decode("utf-8")
|
103 |
+
assert msg in stderr_msg, stderr_msg
|
venv/lib/python3.10/site-packages/pandas/tests/series/__init__.py
ADDED
File without changes
|
venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/__init__.cpython-310.pyc
ADDED
Binary file (187 Bytes). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_api.cpython-310.pyc
ADDED
Binary file (10.6 kB). View file
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|
venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_arithmetic.cpython-310.pyc
ADDED
Binary file (30.3 kB). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_constructors.cpython-310.pyc
ADDED
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|
venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_cumulative.cpython-310.pyc
ADDED
Binary file (4.45 kB). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_formats.cpython-310.pyc
ADDED
Binary file (18.7 kB). View file
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|
venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_iteration.cpython-310.pyc
ADDED
Binary file (1.64 kB). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_logical_ops.cpython-310.pyc
ADDED
Binary file (14.7 kB). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_missing.cpython-310.pyc
ADDED
Binary file (3.71 kB). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_npfuncs.cpython-310.pyc
ADDED
Binary file (1.75 kB). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_reductions.cpython-310.pyc
ADDED
Binary file (6.81 kB). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_subclass.cpython-310.pyc
ADDED
Binary file (3.57 kB). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_ufunc.cpython-310.pyc
ADDED
Binary file (11.8 kB). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_unary.cpython-310.pyc
ADDED
Binary file (1.95 kB). View file
|
|
venv/lib/python3.10/site-packages/pandas/tests/series/__pycache__/test_validate.cpython-310.pyc
ADDED
Binary file (860 Bytes). View file
|
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venv/lib/python3.10/site-packages/pandas/tests/series/accessors/__init__.py
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