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ckpts/universal/global_step40/zero/13.post_attention_layernorm.weight/fp32.pt

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+oid sha256:f0eb26ef7305299dd4da47cec54a2b762bdb6a98fbf780c7af9773dbbb42dda3
+size 9293

ckpts/universal/global_step40/zero/24.mlp.dense_h_to_4h_swiglu.weight/exp_avg.pt

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+oid sha256:bc512fb9715785b1f6611043918a379903723366559bdc6249e6a672b335b887
+size 33555612

ckpts/universal/global_step40/zero/24.mlp.dense_h_to_4h_swiglu.weight/exp_avg_sq.pt

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+oid sha256:7e02662ffe684f6dfc1e8c9f2cf87cce6301260735c550275f925a457d6e00cb
+size 33555627

ckpts/universal/global_step40/zero/29.vocab_parallel_projection.weight/exp_avg.pt

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+version https://git-lfs.github.com/spec/v1
+oid sha256:8e77f2371490716045206c0310c7badb2b50202a29b26a6a37f0cc4f1d68b2ff
+size 415237276

venv/lib/python3.10/site-packages/scipy/io/_harwell_boeing/__init__.py

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+from .hb import (MalformedHeader, hb_read, hb_write, HBInfo,
+                HBFile, HBMatrixType)
+from ._fortran_format_parser import (FortranFormatParser, IntFormat,
+                                    ExpFormat, BadFortranFormat)
+
+# Deprecated namespaces, to be removed in v2.0.0
+from . import hb
+
+__all__ = [
+    'MalformedHeader', 'hb_read', 'hb_write', 'HBInfo',
+    'HBFile', 'HBMatrixType', 'FortranFormatParser', 'IntFormat',
+    'ExpFormat', 'BadFortranFormat', 'hb'
+]
+
+from scipy._lib._testutils import PytestTester
+test = PytestTester(__name__)
+del PytestTester

venv/lib/python3.10/site-packages/scipy/io/_harwell_boeing/_fortran_format_parser.py

@@ -0,0 +1,309 @@
+"""
+Preliminary module to handle Fortran formats for IO. Does not use this outside
+scipy.sparse io for now, until the API is deemed reasonable.
+
+The *Format classes handle conversion between Fortran and Python format, and
+FortranFormatParser can create *Format instances from raw Fortran format
+strings (e.g. '(3I4)', '(10I3)', etc...)
+"""
+import re
+
+import numpy as np
+
+
+__all__ = ["BadFortranFormat", "FortranFormatParser", "IntFormat", "ExpFormat"]
+
+
+TOKENS = {
+    "LPAR": r"\(",
+    "RPAR": r"\)",
+    "INT_ID": r"I",
+    "EXP_ID": r"E",
+    "INT": r"\d+",
+    "DOT": r"\.",
+}
+
+
+class BadFortranFormat(SyntaxError):
+    pass
+
+
+def number_digits(n):
+    return int(np.floor(np.log10(np.abs(n))) + 1)
+
+
+class IntFormat:
+    @classmethod
+    def from_number(cls, n, min=None):
+        """Given an integer, returns a "reasonable" IntFormat instance to represent
+        any number between 0 and n if n > 0, -n and n if n < 0
+
+        Parameters
+        ----------
+        n : int
+            max number one wants to be able to represent
+        min : int
+            minimum number of characters to use for the format
+
+        Returns
+        -------
+        res : IntFormat
+            IntFormat instance with reasonable (see Notes) computed width
+
+        Notes
+        -----
+        Reasonable should be understood as the minimal string length necessary
+        without losing precision. For example, IntFormat.from_number(1) will
+        return an IntFormat instance of width 2, so that any 0 and 1 may be
+        represented as 1-character strings without loss of information.
+        """
+        width = number_digits(n) + 1
+        if n < 0:
+            width += 1
+        repeat = 80 // width
+        return cls(width, min, repeat=repeat)
+
+    def __init__(self, width, min=None, repeat=None):
+        self.width = width
+        self.repeat = repeat
+        self.min = min
+
+    def __repr__(self):
+        r = "IntFormat("
+        if self.repeat:
+            r += "%d" % self.repeat
+        r += "I%d" % self.width
+        if self.min:
+            r += ".%d" % self.min
+        return r + ")"
+
+    @property
+    def fortran_format(self):
+        r = "("
+        if self.repeat:
+            r += "%d" % self.repeat
+        r += "I%d" % self.width
+        if self.min:
+            r += ".%d" % self.min
+        return r + ")"
+
+    @property
+    def python_format(self):
+        return "%" + str(self.width) + "d"
+
+
+class ExpFormat:
+    @classmethod
+    def from_number(cls, n, min=None):
+        """Given a float number, returns a "reasonable" ExpFormat instance to
+        represent any number between -n and n.
+
+        Parameters
+        ----------
+        n : float
+            max number one wants to be able to represent
+        min : int
+            minimum number of characters to use for the format
+
+        Returns
+        -------
+        res : ExpFormat
+            ExpFormat instance with reasonable (see Notes) computed width
+
+        Notes
+        -----
+        Reasonable should be understood as the minimal string length necessary
+        to avoid losing precision.
+        """
+        # len of one number in exp format: sign + 1|0 + "." +
+        # number of digit for fractional part + 'E' + sign of exponent +
+        # len of exponent
+        finfo = np.finfo(n.dtype)
+        # Number of digits for fractional part
+        n_prec = finfo.precision + 1
+        # Number of digits for exponential part
+        n_exp = number_digits(np.max(np.abs([finfo.maxexp, finfo.minexp])))
+        width = 1 + 1 + n_prec + 1 + n_exp + 1
+        if n < 0:
+            width += 1
+        repeat = int(np.floor(80 / width))
+        return cls(width, n_prec, min, repeat=repeat)
+
+    def __init__(self, width, significand, min=None, repeat=None):
+        """\
+        Parameters
+        ----------
+        width : int
+            number of characters taken by the string (includes space).
+        """
+        self.width = width
+        self.significand = significand
+        self.repeat = repeat
+        self.min = min
+
+    def __repr__(self):
+        r = "ExpFormat("
+        if self.repeat:
+            r += "%d" % self.repeat
+        r += "E%d.%d" % (self.width, self.significand)
+        if self.min:
+            r += "E%d" % self.min
+        return r + ")"
+
+    @property
+    def fortran_format(self):
+        r = "("
+        if self.repeat:
+            r += "%d" % self.repeat
+        r += "E%d.%d" % (self.width, self.significand)
+        if self.min:
+            r += "E%d" % self.min
+        return r + ")"
+
+    @property
+    def python_format(self):
+        return "%" + str(self.width-1) + "." + str(self.significand) + "E"
+
+
+class Token:
+    def __init__(self, type, value, pos):
+        self.type = type
+        self.value = value
+        self.pos = pos
+
+    def __str__(self):
+        return f"""Token('{self.type}', "{self.value}")"""
+
+    def __repr__(self):
+        return self.__str__()
+
+
+class Tokenizer:
+    def __init__(self):
+        self.tokens = list(TOKENS.keys())
+        self.res = [re.compile(TOKENS[i]) for i in self.tokens]
+
+    def input(self, s):
+        self.data = s
+        self.curpos = 0
+        self.len = len(s)
+
+    def next_token(self):
+        curpos = self.curpos
+
+        while curpos < self.len:
+            for i, r in enumerate(self.res):
+                m = r.match(self.data, curpos)
+                if m is None:
+                    continue
+                else:
+                    self.curpos = m.end()
+                    return Token(self.tokens[i], m.group(), self.curpos)
+            raise SyntaxError("Unknown character at position %d (%s)"
+                              % (self.curpos, self.data[curpos]))
+
+
+# Grammar for fortran format:
+# format            : LPAR format_string RPAR
+# format_string     : repeated | simple
+# repeated          : repeat simple
+# simple            : int_fmt | exp_fmt
+# int_fmt           : INT_ID width
+# exp_fmt           : simple_exp_fmt
+# simple_exp_fmt    : EXP_ID width DOT significand
+# extended_exp_fmt  : EXP_ID width DOT significand EXP_ID ndigits
+# repeat            : INT
+# width             : INT
+# significand       : INT
+# ndigits           : INT
+
+# Naive fortran formatter - parser is hand-made
+class FortranFormatParser:
+    """Parser for Fortran format strings. The parse method returns a *Format
+    instance.
+
+    Notes
+    -----
+    Only ExpFormat (exponential format for floating values) and IntFormat
+    (integer format) for now.
+    """
+    def __init__(self):
+        self.tokenizer = Tokenizer()
+
+    def parse(self, s):
+        self.tokenizer.input(s)
+
+        tokens = []
+
+        try:
+            while True:
+                t = self.tokenizer.next_token()
+                if t is None:
+                    break
+                else:
+                    tokens.append(t)
+            return self._parse_format(tokens)
+        except SyntaxError as e:
+            raise BadFortranFormat(str(e)) from e
+
+    def _get_min(self, tokens):
+        next = tokens.pop(0)
+        if not next.type == "DOT":
+            raise SyntaxError()
+        next = tokens.pop(0)
+        return next.value
+
+    def _expect(self, token, tp):
+        if not token.type == tp:
+            raise SyntaxError()
+
+    def _parse_format(self, tokens):
+        if not tokens[0].type == "LPAR":
+            raise SyntaxError("Expected left parenthesis at position "
+                              "%d (got '%s')" % (0, tokens[0].value))
+        elif not tokens[-1].type == "RPAR":
+            raise SyntaxError("Expected right parenthesis at position "
+                              "%d (got '%s')" % (len(tokens), tokens[-1].value))
+
+        tokens = tokens[1:-1]
+        types = [t.type for t in tokens]
+        if types[0] == "INT":
+            repeat = int(tokens.pop(0).value)
+        else:
+            repeat = None
+
+        next = tokens.pop(0)
+        if next.type == "INT_ID":
+            next = self._next(tokens, "INT")
+            width = int(next.value)
+            if tokens:
+                min = int(self._get_min(tokens))
+            else:
+                min = None
+            return IntFormat(width, min, repeat)
+        elif next.type == "EXP_ID":
+            next = self._next(tokens, "INT")
+            width = int(next.value)
+
+            next = self._next(tokens, "DOT")
+
+            next = self._next(tokens, "INT")
+            significand = int(next.value)
+
+            if tokens:
+                next = self._next(tokens, "EXP_ID")
+
+                next = self._next(tokens, "INT")
+                min = int(next.value)
+            else:
+                min = None
+            return ExpFormat(width, significand, min, repeat)
+        else:
+            raise SyntaxError("Invalid formatter type %s" % next.value)
+
+    def _next(self, tokens, tp):
+        if not len(tokens) > 0:
+            raise SyntaxError()
+        next = tokens.pop(0)
+        self._expect(next, tp)
+        return next

venv/lib/python3.10/site-packages/scipy/io/_harwell_boeing/hb.py

@@ -0,0 +1,571 @@
+"""
+Implementation of Harwell-Boeing read/write.
+
+At the moment not the full Harwell-Boeing format is supported. Supported
+features are:
+
+    - assembled, non-symmetric, real matrices
+    - integer for pointer/indices
+    - exponential format for float values, and int format
+
+"""
+# TODO:
+#   - Add more support (symmetric/complex matrices, non-assembled matrices ?)
+
+# XXX: reading is reasonably efficient (>= 85 % is in numpy.fromstring), but
+# takes a lot of memory. Being faster would require compiled code.
+# write is not efficient. Although not a terribly exciting task,
+# having reusable facilities to efficiently read/write fortran-formatted files
+# would be useful outside this module.
+
+import warnings
+
+import numpy as np
+from scipy.sparse import csc_matrix
+from ._fortran_format_parser import FortranFormatParser, IntFormat, ExpFormat
+
+__all__ = ["MalformedHeader", "hb_read", "hb_write", "HBInfo", "HBFile",
+           "HBMatrixType"]
+
+
+class MalformedHeader(Exception):
+    pass
+
+
+class LineOverflow(Warning):
+    pass
+
+
+def _nbytes_full(fmt, nlines):
+    """Return the number of bytes to read to get every full lines for the
+    given parsed fortran format."""
+    return (fmt.repeat * fmt.width + 1) * (nlines - 1)
+
+
+class HBInfo:
+    @classmethod
+    def from_data(cls, m, title="Default title", key="0", mxtype=None, fmt=None):
+        """Create a HBInfo instance from an existing sparse matrix.
+
+        Parameters
+        ----------
+        m : sparse matrix
+            the HBInfo instance will derive its parameters from m
+        title : str
+            Title to put in the HB header
+        key : str
+            Key
+        mxtype : HBMatrixType
+            type of the input matrix
+        fmt : dict
+            not implemented
+
+        Returns
+        -------
+        hb_info : HBInfo instance
+        """
+        m = m.tocsc(copy=False)
+
+        pointer = m.indptr
+        indices = m.indices
+        values = m.data
+
+        nrows, ncols = m.shape
+        nnon_zeros = m.nnz
+
+        if fmt is None:
+            # +1 because HB use one-based indexing (Fortran), and we will write
+            # the indices /pointer as such
+            pointer_fmt = IntFormat.from_number(np.max(pointer+1))
+            indices_fmt = IntFormat.from_number(np.max(indices+1))
+
+            if values.dtype.kind in np.typecodes["AllFloat"]:
+                values_fmt = ExpFormat.from_number(-np.max(np.abs(values)))
+            elif values.dtype.kind in np.typecodes["AllInteger"]:
+                values_fmt = IntFormat.from_number(-np.max(np.abs(values)))
+            else:
+                message = f"type {values.dtype.kind} not implemented yet"
+                raise NotImplementedError(message)
+        else:
+            raise NotImplementedError("fmt argument not supported yet.")
+
+        if mxtype is None:
+            if not np.isrealobj(values):
+                raise ValueError("Complex values not supported yet")
+            if values.dtype.kind in np.typecodes["AllInteger"]:
+                tp = "integer"
+            elif values.dtype.kind in np.typecodes["AllFloat"]:
+                tp = "real"
+            else:
+                raise NotImplementedError("type %s for values not implemented"
+                                          % values.dtype)
+            mxtype = HBMatrixType(tp, "unsymmetric", "assembled")
+        else:
+            raise ValueError("mxtype argument not handled yet.")
+
+        def _nlines(fmt, size):
+            nlines = size // fmt.repeat
+            if nlines * fmt.repeat != size:
+                nlines += 1
+            return nlines
+
+        pointer_nlines = _nlines(pointer_fmt, pointer.size)
+        indices_nlines = _nlines(indices_fmt, indices.size)
+        values_nlines = _nlines(values_fmt, values.size)
+
+        total_nlines = pointer_nlines + indices_nlines + values_nlines
+
+        return cls(title, key,
+            total_nlines, pointer_nlines, indices_nlines, values_nlines,
+            mxtype, nrows, ncols, nnon_zeros,
+            pointer_fmt.fortran_format, indices_fmt.fortran_format,
+            values_fmt.fortran_format)
+
+    @classmethod
+    def from_file(cls, fid):
+        """Create a HBInfo instance from a file object containing a matrix in the
+        HB format.
+
+        Parameters
+        ----------
+        fid : file-like matrix
+            File or file-like object containing a matrix in the HB format.
+
+        Returns
+        -------
+        hb_info : HBInfo instance
+        """
+        # First line
+        line = fid.readline().strip("\n")
+        if not len(line) > 72:
+            raise ValueError("Expected at least 72 characters for first line, "
+                             "got: \n%s" % line)
+        title = line[:72]
+        key = line[72:]
+
+        # Second line
+        line = fid.readline().strip("\n")
+        if not len(line.rstrip()) >= 56:
+            raise ValueError("Expected at least 56 characters for second line, "
+                             "got: \n%s" % line)
+        total_nlines = _expect_int(line[:14])
+        pointer_nlines = _expect_int(line[14:28])
+        indices_nlines = _expect_int(line[28:42])
+        values_nlines = _expect_int(line[42:56])
+
+        rhs_nlines = line[56:72].strip()
+        if rhs_nlines == '':
+            rhs_nlines = 0
+        else:
+            rhs_nlines = _expect_int(rhs_nlines)
+        if not rhs_nlines == 0:
+            raise ValueError("Only files without right hand side supported for "
+                             "now.")
+
+        # Third line
+        line = fid.readline().strip("\n")
+        if not len(line) >= 70:
+            raise ValueError("Expected at least 72 character for third line, got:\n"
+                             "%s" % line)
+
+        mxtype_s = line[:3].upper()
+        if not len(mxtype_s) == 3:
+            raise ValueError("mxtype expected to be 3 characters long")
+
+        mxtype = HBMatrixType.from_fortran(mxtype_s)
+        if mxtype.value_type not in ["real", "integer"]:
+            raise ValueError("Only real or integer matrices supported for "
+                             "now (detected %s)" % mxtype)
+        if not mxtype.structure == "unsymmetric":
+            raise ValueError("Only unsymmetric matrices supported for "
+                             "now (detected %s)" % mxtype)
+        if not mxtype.storage == "assembled":
+            raise ValueError("Only assembled matrices supported for now")
+
+        if not line[3:14] == " " * 11:
+            raise ValueError("Malformed data for third line: %s" % line)
+
+        nrows = _expect_int(line[14:28])
+        ncols = _expect_int(line[28:42])
+        nnon_zeros = _expect_int(line[42:56])
+        nelementals = _expect_int(line[56:70])
+        if not nelementals == 0:
+            raise ValueError("Unexpected value %d for nltvl (last entry of line 3)"
+                             % nelementals)
+
+        # Fourth line
+        line = fid.readline().strip("\n")
+
+        ct = line.split()
+        if not len(ct) == 3:
+            raise ValueError("Expected 3 formats, got %s" % ct)
+
+        return cls(title, key,
+                   total_nlines, pointer_nlines, indices_nlines, values_nlines,
+                   mxtype, nrows, ncols, nnon_zeros,
+                   ct[0], ct[1], ct[2],
+                   rhs_nlines, nelementals)
+
+    def __init__(self, title, key,
+            total_nlines, pointer_nlines, indices_nlines, values_nlines,
+            mxtype, nrows, ncols, nnon_zeros,
+            pointer_format_str, indices_format_str, values_format_str,
+            right_hand_sides_nlines=0, nelementals=0):
+        """Do not use this directly, but the class ctrs (from_* functions)."""
+        self.title = title
+        self.key = key
+        if title is None:
+            title = "No Title"
+        if len(title) > 72:
+            raise ValueError("title cannot be > 72 characters")
+
+        if key is None:
+            key = "|No Key"
+        if len(key) > 8:
+            warnings.warn("key is > 8 characters (key is %s)" % key,
+                          LineOverflow, stacklevel=3)
+
+        self.total_nlines = total_nlines
+        self.pointer_nlines = pointer_nlines
+        self.indices_nlines = indices_nlines
+        self.values_nlines = values_nlines
+
+        parser = FortranFormatParser()
+        pointer_format = parser.parse(pointer_format_str)
+        if not isinstance(pointer_format, IntFormat):
+            raise ValueError("Expected int format for pointer format, got %s"
+                             % pointer_format)
+
+        indices_format = parser.parse(indices_format_str)
+        if not isinstance(indices_format, IntFormat):
+            raise ValueError("Expected int format for indices format, got %s" %
+                             indices_format)
+
+        values_format = parser.parse(values_format_str)
+        if isinstance(values_format, ExpFormat):
+            if mxtype.value_type not in ["real", "complex"]:
+                raise ValueError(f"Inconsistency between matrix type {mxtype} and "
+                                 f"value type {values_format}")
+            values_dtype = np.float64
+        elif isinstance(values_format, IntFormat):
+            if mxtype.value_type not in ["integer"]:
+                raise ValueError(f"Inconsistency between matrix type {mxtype} and "
+                                 f"value type {values_format}")
+            # XXX: fortran int -> dtype association ?
+            values_dtype = int
+        else:
+            raise ValueError(f"Unsupported format for values {values_format!r}")
+
+        self.pointer_format = pointer_format
+        self.indices_format = indices_format
+        self.values_format = values_format
+
+        self.pointer_dtype = np.int32
+        self.indices_dtype = np.int32
+        self.values_dtype = values_dtype
+
+        self.pointer_nlines = pointer_nlines
+        self.pointer_nbytes_full = _nbytes_full(pointer_format, pointer_nlines)
+
+        self.indices_nlines = indices_nlines
+        self.indices_nbytes_full = _nbytes_full(indices_format, indices_nlines)
+
+        self.values_nlines = values_nlines
+        self.values_nbytes_full = _nbytes_full(values_format, values_nlines)
+
+        self.nrows = nrows
+        self.ncols = ncols
+        self.nnon_zeros = nnon_zeros
+        self.nelementals = nelementals
+        self.mxtype = mxtype
+
+    def dump(self):
+        """Gives the header corresponding to this instance as a string."""
+        header = [self.title.ljust(72) + self.key.ljust(8)]
+
+        header.append("%14d%14d%14d%14d" %
+                      (self.total_nlines, self.pointer_nlines,
+                       self.indices_nlines, self.values_nlines))
+        header.append("%14s%14d%14d%14d%14d" %
+                      (self.mxtype.fortran_format.ljust(14), self.nrows,
+                       self.ncols, self.nnon_zeros, 0))
+
+        pffmt = self.pointer_format.fortran_format
+        iffmt = self.indices_format.fortran_format
+        vffmt = self.values_format.fortran_format
+        header.append("%16s%16s%20s" %
+                      (pffmt.ljust(16), iffmt.ljust(16), vffmt.ljust(20)))
+        return "\n".join(header)
+
+
+def _expect_int(value, msg=None):
+    try:
+        return int(value)
+    except ValueError as e:
+        if msg is None:
+            msg = "Expected an int, got %s"
+        raise ValueError(msg % value) from e
+
+
+def _read_hb_data(content, header):
+    # XXX: look at a way to reduce memory here (big string creation)
+    ptr_string = "".join([content.read(header.pointer_nbytes_full),
+                           content.readline()])
+    ptr = np.fromstring(ptr_string,
+            dtype=int, sep=' ')
+
+    ind_string = "".join([content.read(header.indices_nbytes_full),
+                       content.readline()])
+    ind = np.fromstring(ind_string,
+            dtype=int, sep=' ')
+
+    val_string = "".join([content.read(header.values_nbytes_full),
+                          content.readline()])
+    val = np.fromstring(val_string,
+            dtype=header.values_dtype, sep=' ')
+
+    try:
+        return csc_matrix((val, ind-1, ptr-1),
+                          shape=(header.nrows, header.ncols))
+    except ValueError as e:
+        raise e
+
+
+def _write_data(m, fid, header):
+    m = m.tocsc(copy=False)
+
+    def write_array(f, ar, nlines, fmt):
+        # ar_nlines is the number of full lines, n is the number of items per
+        # line, ffmt the fortran format
+        pyfmt = fmt.python_format
+        pyfmt_full = pyfmt * fmt.repeat
+
+        # for each array to write, we first write the full lines, and special
+        # case for partial line
+        full = ar[:(nlines - 1) * fmt.repeat]
+        for row in full.reshape((nlines-1, fmt.repeat)):
+            f.write(pyfmt_full % tuple(row) + "\n")
+        nremain = ar.size - full.size
+        if nremain > 0:
+            f.write((pyfmt * nremain) % tuple(ar[ar.size - nremain:]) + "\n")
+
+    fid.write(header.dump())
+    fid.write("\n")
+    # +1 is for Fortran one-based indexing
+    write_array(fid, m.indptr+1, header.pointer_nlines,
+                header.pointer_format)
+    write_array(fid, m.indices+1, header.indices_nlines,
+                header.indices_format)
+    write_array(fid, m.data, header.values_nlines,
+                header.values_format)
+
+
+class HBMatrixType:
+    """Class to hold the matrix type."""
+    # q2f* translates qualified names to Fortran character
+    _q2f_type = {
+        "real": "R",
+        "complex": "C",
+        "pattern": "P",
+        "integer": "I",
+    }
+    _q2f_structure = {
+            "symmetric": "S",
+            "unsymmetric": "U",
+            "hermitian": "H",
+            "skewsymmetric": "Z",
+            "rectangular": "R"
+    }
+    _q2f_storage = {
+        "assembled": "A",
+        "elemental": "E",
+    }
+
+    _f2q_type = {j: i for i, j in _q2f_type.items()}
+    _f2q_structure = {j: i for i, j in _q2f_structure.items()}
+    _f2q_storage = {j: i for i, j in _q2f_storage.items()}
+
+    @classmethod
+    def from_fortran(cls, fmt):
+        if not len(fmt) == 3:
+            raise ValueError("Fortran format for matrix type should be 3 "
+                             "characters long")
+        try:
+            value_type = cls._f2q_type[fmt[0]]
+            structure = cls._f2q_structure[fmt[1]]
+            storage = cls._f2q_storage[fmt[2]]
+            return cls(value_type, structure, storage)
+        except KeyError as e:
+            raise ValueError("Unrecognized format %s" % fmt) from e
+
+    def __init__(self, value_type, structure, storage="assembled"):
+        self.value_type = value_type
+        self.structure = structure
+        self.storage = storage
+
+        if value_type not in self._q2f_type:
+            raise ValueError("Unrecognized type %s" % value_type)
+        if structure not in self._q2f_structure:
+            raise ValueError("Unrecognized structure %s" % structure)
+        if storage not in self._q2f_storage:
+            raise ValueError("Unrecognized storage %s" % storage)
+
+    @property
+    def fortran_format(self):
+        return self._q2f_type[self.value_type] + \
+               self._q2f_structure[self.structure] + \
+               self._q2f_storage[self.storage]
+
+    def __repr__(self):
+        return f"HBMatrixType({self.value_type}, {self.structure}, {self.storage})"
+
+
+class HBFile:
+    def __init__(self, file, hb_info=None):
+        """Create a HBFile instance.
+
+        Parameters
+        ----------
+        file : file-object
+            StringIO work as well
+        hb_info : HBInfo, optional
+            Should be given as an argument for writing, in which case the file
+            should be writable.
+        """
+        self._fid = file
+        if hb_info is None:
+            self._hb_info = HBInfo.from_file(file)
+        else:
+            #raise OSError("file %s is not writable, and hb_info "
+            #              "was given." % file)
+            self._hb_info = hb_info
+
+    @property
+    def title(self):
+        return self._hb_info.title
+
+    @property
+    def key(self):
+        return self._hb_info.key
+
+    @property
+    def type(self):
+        return self._hb_info.mxtype.value_type
+
+    @property
+    def structure(self):
+        return self._hb_info.mxtype.structure
+
+    @property
+    def storage(self):
+        return self._hb_info.mxtype.storage
+
+    def read_matrix(self):
+        return _read_hb_data(self._fid, self._hb_info)
+
+    def write_matrix(self, m):
+        return _write_data(m, self._fid, self._hb_info)
+
+
+def hb_read(path_or_open_file):
+    """Read HB-format file.
+
+    Parameters
+    ----------
+    path_or_open_file : path-like or file-like
+        If a file-like object, it is used as-is. Otherwise, it is opened
+        before reading.
+
+    Returns
+    -------
+    data : scipy.sparse.csc_matrix instance
+        The data read from the HB file as a sparse matrix.
+
+    Notes
+    -----
+    At the moment not the full Harwell-Boeing format is supported. Supported
+    features are:
+
+        - assembled, non-symmetric, real matrices
+        - integer for pointer/indices
+        - exponential format for float values, and int format
+
+    Examples
+    --------
+    We can read and write a harwell-boeing format file:
+
+    >>> from scipy.io import hb_read, hb_write
+    >>> from scipy.sparse import csr_matrix, eye
+    >>> data = csr_matrix(eye(3))  # create a sparse matrix
+    >>> hb_write("data.hb", data)  # write a hb file
+    >>> print(hb_read("data.hb"))  # read a hb file
+      (0, 0)	1.0
+      (1, 1)	1.0
+      (2, 2)	1.0
+
+    """
+    def _get_matrix(fid):
+        hb = HBFile(fid)
+        return hb.read_matrix()
+
+    if hasattr(path_or_open_file, 'read'):
+        return _get_matrix(path_or_open_file)
+    else:
+        with open(path_or_open_file) as f:
+            return _get_matrix(f)
+
+
+def hb_write(path_or_open_file, m, hb_info=None):
+    """Write HB-format file.
+
+    Parameters
+    ----------
+    path_or_open_file : path-like or file-like
+        If a file-like object, it is used as-is. Otherwise, it is opened
+        before writing.
+    m : sparse-matrix
+        the sparse matrix to write
+    hb_info : HBInfo
+        contains the meta-data for write
+
+    Returns
+    -------
+    None
+
+    Notes
+    -----
+    At the moment not the full Harwell-Boeing format is supported. Supported
+    features are:
+
+        - assembled, non-symmetric, real matrices
+        - integer for pointer/indices
+        - exponential format for float values, and int format
+
+    Examples
+    --------
+    We can read and write a harwell-boeing format file:
+
+    >>> from scipy.io import hb_read, hb_write
+    >>> from scipy.sparse import csr_matrix, eye
+    >>> data = csr_matrix(eye(3))  # create a sparse matrix
+    >>> hb_write("data.hb", data)  # write a hb file
+    >>> print(hb_read("data.hb"))  # read a hb file
+      (0, 0)	1.0
+      (1, 1)	1.0
+      (2, 2)	1.0
+
+    """
+    m = m.tocsc(copy=False)
+
+    if hb_info is None:
+        hb_info = HBInfo.from_data(m)
+
+    def _set_matrix(fid):
+        hb = HBFile(fid, hb_info)
+        return hb.write_matrix(m)
+
+    if hasattr(path_or_open_file, 'write'):
+        return _set_matrix(path_or_open_file)
+    else:
+        with open(path_or_open_file, 'w') as f:
+            return _set_matrix(f)

venv/lib/python3.10/site-packages/scipy/io/_harwell_boeing/tests/test_fortran_format.py

@@ -0,0 +1,74 @@
+import numpy as np
+
+from numpy.testing import assert_equal
+from pytest import raises as assert_raises
+
+from scipy.io._harwell_boeing import (
+        FortranFormatParser, IntFormat, ExpFormat, BadFortranFormat)
+
+
+class TestFortranFormatParser:
+    def setup_method(self):
+        self.parser = FortranFormatParser()
+
+    def _test_equal(self, format, ref):
+        ret = self.parser.parse(format)
+        assert_equal(ret.__dict__, ref.__dict__)
+
+    def test_simple_int(self):
+        self._test_equal("(I4)", IntFormat(4))
+
+    def test_simple_repeated_int(self):
+        self._test_equal("(3I4)", IntFormat(4, repeat=3))
+
+    def test_simple_exp(self):
+        self._test_equal("(E4.3)", ExpFormat(4, 3))
+
+    def test_exp_exp(self):
+        self._test_equal("(E8.3E3)", ExpFormat(8, 3, 3))
+
+    def test_repeat_exp(self):
+        self._test_equal("(2E4.3)", ExpFormat(4, 3, repeat=2))
+
+    def test_repeat_exp_exp(self):
+        self._test_equal("(2E8.3E3)", ExpFormat(8, 3, 3, repeat=2))
+
+    def test_wrong_formats(self):
+        def _test_invalid(bad_format):
+            assert_raises(BadFortranFormat, lambda: self.parser.parse(bad_format))
+        _test_invalid("I4")
+        _test_invalid("(E4)")
+        _test_invalid("(E4.)")
+        _test_invalid("(E4.E3)")
+
+
+class TestIntFormat:
+    def test_to_fortran(self):
+        f = [IntFormat(10), IntFormat(12, 10), IntFormat(12, 10, 3)]
+        res = ["(I10)", "(I12.10)", "(3I12.10)"]
+
+        for i, j in zip(f, res):
+            assert_equal(i.fortran_format, j)
+
+    def test_from_number(self):
+        f = [10, -12, 123456789]
+        r_f = [IntFormat(3, repeat=26), IntFormat(4, repeat=20),
+               IntFormat(10, repeat=8)]
+        for i, j in zip(f, r_f):
+            assert_equal(IntFormat.from_number(i).__dict__, j.__dict__)
+
+
+class TestExpFormat:
+    def test_to_fortran(self):
+        f = [ExpFormat(10, 5), ExpFormat(12, 10), ExpFormat(12, 10, min=3),
+             ExpFormat(10, 5, repeat=3)]
+        res = ["(E10.5)", "(E12.10)", "(E12.10E3)", "(3E10.5)"]
+
+        for i, j in zip(f, res):
+            assert_equal(i.fortran_format, j)
+
+    def test_from_number(self):
+        f = np.array([1.0, -1.2])
+        r_f = [ExpFormat(24, 16, repeat=3), ExpFormat(25, 16, repeat=3)]
+        for i, j in zip(f, r_f):
+            assert_equal(ExpFormat.from_number(i).__dict__, j.__dict__)

venv/lib/python3.10/site-packages/scipy/io/_harwell_boeing/tests/test_hb.py

@@ -0,0 +1,65 @@
+from io import StringIO
+import tempfile
+
+import numpy as np
+
+from numpy.testing import assert_equal, \
+    assert_array_almost_equal_nulp
+
+from scipy.sparse import coo_matrix, csc_matrix, rand
+
+from scipy.io import hb_read, hb_write
+
+
+SIMPLE = """\
+No Title                                                                |No Key
+             9             4             1             4
+RUA                      100           100            10             0
+(26I3)          (26I3)          (3E23.15)
+1  2  2  2  2  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3
+3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3  3
+3  3  3  3  3  3  3  4  4  4  6  6  6  6  6  6  6  6  6  6  6  8  9  9  9  9
+9  9  9  9  9  9  9  9  9  9  9  9  9  9  9  9  9  9  9  9  9  9 11
+37 71 89 18 30 45 70 19 25 52
+2.971243799687726e-01  3.662366682877375e-01  4.786962174699534e-01
+6.490068647991184e-01  6.617490424831662e-02  8.870370343191623e-01
+4.196478590163001e-01  5.649603072111251e-01  9.934423887087086e-01
+6.912334991524289e-01
+"""
+
+SIMPLE_MATRIX = coo_matrix(
+    ((0.297124379969, 0.366236668288, 0.47869621747, 0.649006864799,
+      0.0661749042483, 0.887037034319, 0.419647859016,
+      0.564960307211, 0.993442388709, 0.691233499152,),
+     (np.array([[36, 70, 88, 17, 29, 44, 69, 18, 24, 51],
+                [0, 4, 58, 61, 61, 72, 72, 73, 99, 99]]))))
+
+
+def assert_csc_almost_equal(r, l):
+    r = csc_matrix(r)
+    l = csc_matrix(l)
+    assert_equal(r.indptr, l.indptr)
+    assert_equal(r.indices, l.indices)
+    assert_array_almost_equal_nulp(r.data, l.data, 10000)
+
+
+class TestHBReader:
+    def test_simple(self):
+        m = hb_read(StringIO(SIMPLE))
+        assert_csc_almost_equal(m, SIMPLE_MATRIX)
+
+
+class TestHBReadWrite:
+
+    def check_save_load(self, value):
+        with tempfile.NamedTemporaryFile(mode='w+t') as file:
+            hb_write(file, value)
+            file.file.seek(0)
+            value_loaded = hb_read(file)
+        assert_csc_almost_equal(value, value_loaded)
+
+    def test_simple(self):
+        random_matrix = rand(10, 100, 0.1)
+        for matrix_format in ('coo', 'csc', 'csr', 'bsr', 'dia', 'dok', 'lil'):
+            matrix = random_matrix.asformat(matrix_format, copy=False)
+            self.check_save_load(matrix)

venv/lib/python3.10/site-packages/scipy/io/arff/__init__.py

@@ -0,0 +1,28 @@
+"""
+Module to read ARFF files
+=========================
+ARFF is the standard data format for WEKA.
+It is a text file format which support numerical, string and data values.
+The format can also represent missing data and sparse data.
+
+Notes
+-----
+The ARFF support in ``scipy.io`` provides file reading functionality only.
+For more extensive ARFF functionality, see `liac-arff
+<https://github.com/renatopp/liac-arff>`_.
+
+See the `WEKA website <http://weka.wikispaces.com/ARFF>`_
+for more details about the ARFF format and available datasets.
+
+"""
+from ._arffread import *
+from . import _arffread
+
+# Deprecated namespaces, to be removed in v2.0.0
+from .import arffread
+
+__all__ = _arffread.__all__ + ['arffread']
+
+from scipy._lib._testutils import PytestTester
+test = PytestTester(__name__)
+del PytestTester

venv/lib/python3.10/site-packages/scipy/io/arff/_arffread.py

@@ -0,0 +1,907 @@
+# Last Change: Mon Aug 20 08:00 PM 2007 J
+import re
+import datetime
+
+import numpy as np
+
+import csv
+import ctypes
+
+"""A module to read arff files."""
+
+__all__ = ['MetaData', 'loadarff', 'ArffError', 'ParseArffError']
+
+# An Arff file is basically two parts:
+#   - header
+#   - data
+#
+# A header has each of its components starting by @META where META is one of
+# the keyword (attribute of relation, for now).
+
+# TODO:
+#   - both integer and reals are treated as numeric -> the integer info
+#    is lost!
+#   - Replace ValueError by ParseError or something
+
+# We know can handle the following:
+#   - numeric and nominal attributes
+#   - missing values for numeric attributes
+
+r_meta = re.compile(r'^\s*@')
+# Match a comment
+r_comment = re.compile(r'^%')
+# Match an empty line
+r_empty = re.compile(r'^\s+$')
+# Match a header line, that is a line which starts by @ + a word
+r_headerline = re.compile(r'^\s*@\S*')
+r_datameta = re.compile(r'^@[Dd][Aa][Tt][Aa]')
+r_relation = re.compile(r'^@[Rr][Ee][Ll][Aa][Tt][Ii][Oo][Nn]\s*(\S*)')
+r_attribute = re.compile(r'^\s*@[Aa][Tt][Tt][Rr][Ii][Bb][Uu][Tt][Ee]\s*(..*$)')
+
+r_nominal = re.compile(r'{(.+)}')
+r_date = re.compile(r"[Dd][Aa][Tt][Ee]\s+[\"']?(.+?)[\"']?$")
+
+# To get attributes name enclosed with ''
+r_comattrval = re.compile(r"'(..+)'\s+(..+$)")
+# To get normal attributes
+r_wcomattrval = re.compile(r"(\S+)\s+(..+$)")
+
+# ------------------------
+# Module defined exception
+# ------------------------
+
+
+class ArffError(OSError):
+    pass
+
+
+class ParseArffError(ArffError):
+    pass
+
+
+# ----------
+# Attributes
+# ----------
+class Attribute:
+
+    type_name = None
+
+    def __init__(self, name):
+        self.name = name
+        self.range = None
+        self.dtype = np.object_
+
+    @classmethod
+    def parse_attribute(cls, name, attr_string):
+        """
+        Parse the attribute line if it knows how. Returns the parsed
+        attribute, or None.
+        """
+        return None
+
+    def parse_data(self, data_str):
+        """
+        Parse a value of this type.
+        """
+        return None
+
+    def __str__(self):
+        """
+        Parse a value of this type.
+        """
+        return self.name + ',' + self.type_name
+
+
+class NominalAttribute(Attribute):
+
+    type_name = 'nominal'
+
+    def __init__(self, name, values):
+        super().__init__(name)
+        self.values = values
+        self.range = values
+        self.dtype = (np.bytes_, max(len(i) for i in values))
+
+    @staticmethod
+    def _get_nom_val(atrv):
+        """Given a string containing a nominal type, returns a tuple of the
+        possible values.
+
+        A nominal type is defined as something framed between braces ({}).
+
+        Parameters
+        ----------
+        atrv : str
+           Nominal type definition
+
+        Returns
+        -------
+        poss_vals : tuple
+           possible values
+
+        Examples
+        --------
+        >>> from scipy.io.arff._arffread import NominalAttribute
+        >>> NominalAttribute._get_nom_val("{floup, bouga, fl, ratata}")
+        ('floup', 'bouga', 'fl', 'ratata')
+        """
+        m = r_nominal.match(atrv)
+        if m:
+            attrs, _ = split_data_line(m.group(1))
+            return tuple(attrs)
+        else:
+            raise ValueError("This does not look like a nominal string")
+
+    @classmethod
+    def parse_attribute(cls, name, attr_string):
+        """
+        Parse the attribute line if it knows how. Returns the parsed
+        attribute, or None.
+
+        For nominal attributes, the attribute string would be like '{<attr_1>,
+         <attr2>, <attr_3>}'.
+        """
+        if attr_string[0] == '{':
+            values = cls._get_nom_val(attr_string)
+            return cls(name, values)
+        else:
+            return None
+
+    def parse_data(self, data_str):
+        """
+        Parse a value of this type.
+        """
+        if data_str in self.values:
+            return data_str
+        elif data_str == '?':
+            return data_str
+        else:
+            raise ValueError(f"{str(data_str)} value not in {str(self.values)}")
+
+    def __str__(self):
+        msg = self.name + ",{"
+        for i in range(len(self.values)-1):
+            msg += self.values[i] + ","
+        msg += self.values[-1]
+        msg += "}"
+        return msg
+
+
+class NumericAttribute(Attribute):
+
+    def __init__(self, name):
+        super().__init__(name)
+        self.type_name = 'numeric'
+        self.dtype = np.float64
+
+    @classmethod
+    def parse_attribute(cls, name, attr_string):
+        """
+        Parse the attribute line if it knows how. Returns the parsed
+        attribute, or None.
+
+        For numeric attributes, the attribute string would be like
+        'numeric' or 'int' or 'real'.
+        """
+
+        attr_string = attr_string.lower().strip()
+
+        if (attr_string[:len('numeric')] == 'numeric' or
+           attr_string[:len('int')] == 'int' or
+           attr_string[:len('real')] == 'real'):
+            return cls(name)
+        else:
+            return None
+
+    def parse_data(self, data_str):
+        """
+        Parse a value of this type.
+
+        Parameters
+        ----------
+        data_str : str
+           string to convert
+
+        Returns
+        -------
+        f : float
+           where float can be nan
+
+        Examples
+        --------
+        >>> from scipy.io.arff._arffread import NumericAttribute
+        >>> atr = NumericAttribute('atr')
+        >>> atr.parse_data('1')
+        1.0
+        >>> atr.parse_data('1\\n')
+        1.0
+        >>> atr.parse_data('?\\n')
+        nan
+        """
+        if '?' in data_str:
+            return np.nan
+        else:
+            return float(data_str)
+
+    def _basic_stats(self, data):
+        nbfac = data.size * 1. / (data.size - 1)
+        return (np.nanmin(data), np.nanmax(data),
+                np.mean(data), np.std(data) * nbfac)
+
+
+class StringAttribute(Attribute):
+
+    def __init__(self, name):
+        super().__init__(name)
+        self.type_name = 'string'
+
+    @classmethod
+    def parse_attribute(cls, name, attr_string):
+        """
+        Parse the attribute line if it knows how. Returns the parsed
+        attribute, or None.
+
+        For string attributes, the attribute string would be like
+        'string'.
+        """
+
+        attr_string = attr_string.lower().strip()
+
+        if attr_string[:len('string')] == 'string':
+            return cls(name)
+        else:
+            return None
+
+
+class DateAttribute(Attribute):
+
+    def __init__(self, name, date_format, datetime_unit):
+        super().__init__(name)
+        self.date_format = date_format
+        self.datetime_unit = datetime_unit
+        self.type_name = 'date'
+        self.range = date_format
+        self.dtype = np.datetime64(0, self.datetime_unit)
+
+    @staticmethod
+    def _get_date_format(atrv):
+        m = r_date.match(atrv)
+        if m:
+            pattern = m.group(1).strip()
+            # convert time pattern from Java's SimpleDateFormat to C's format
+            datetime_unit = None
+            if "yyyy" in pattern:
+                pattern = pattern.replace("yyyy", "%Y")
+                datetime_unit = "Y"
+            elif "yy":
+                pattern = pattern.replace("yy", "%y")
+                datetime_unit = "Y"
+            if "MM" in pattern:
+                pattern = pattern.replace("MM", "%m")
+                datetime_unit = "M"
+            if "dd" in pattern:
+                pattern = pattern.replace("dd", "%d")
+                datetime_unit = "D"
+            if "HH" in pattern:
+                pattern = pattern.replace("HH", "%H")
+                datetime_unit = "h"
+            if "mm" in pattern:
+                pattern = pattern.replace("mm", "%M")
+                datetime_unit = "m"
+            if "ss" in pattern:
+                pattern = pattern.replace("ss", "%S")
+                datetime_unit = "s"
+            if "z" in pattern or "Z" in pattern:
+                raise ValueError("Date type attributes with time zone not "
+                                 "supported, yet")
+
+            if datetime_unit is None:
+                raise ValueError("Invalid or unsupported date format")
+
+            return pattern, datetime_unit
+        else:
+            raise ValueError("Invalid or no date format")
+
+    @classmethod
+    def parse_attribute(cls, name, attr_string):
+        """
+        Parse the attribute line if it knows how. Returns the parsed
+        attribute, or None.
+
+        For date attributes, the attribute string would be like
+        'date <format>'.
+        """
+
+        attr_string_lower = attr_string.lower().strip()
+
+        if attr_string_lower[:len('date')] == 'date':
+            date_format, datetime_unit = cls._get_date_format(attr_string)
+            return cls(name, date_format, datetime_unit)
+        else:
+            return None
+
+    def parse_data(self, data_str):
+        """
+        Parse a value of this type.
+        """
+        date_str = data_str.strip().strip("'").strip('"')
+        if date_str == '?':
+            return np.datetime64('NaT', self.datetime_unit)
+        else:
+            dt = datetime.datetime.strptime(date_str, self.date_format)
+            return np.datetime64(dt).astype(
+                "datetime64[%s]" % self.datetime_unit)
+
+    def __str__(self):
+        return super().__str__() + ',' + self.date_format
+
+
+class RelationalAttribute(Attribute):
+
+    def __init__(self, name):
+        super().__init__(name)
+        self.type_name = 'relational'
+        self.dtype = np.object_
+        self.attributes = []
+        self.dialect = None
+
+    @classmethod
+    def parse_attribute(cls, name, attr_string):
+        """
+        Parse the attribute line if it knows how. Returns the parsed
+        attribute, or None.
+
+        For date attributes, the attribute string would be like
+        'date <format>'.
+        """
+
+        attr_string_lower = attr_string.lower().strip()
+
+        if attr_string_lower[:len('relational')] == 'relational':
+            return cls(name)
+        else:
+            return None
+
+    def parse_data(self, data_str):
+        # Copy-pasted
+        elems = list(range(len(self.attributes)))
+
+        escaped_string = data_str.encode().decode("unicode-escape")
+
+        row_tuples = []
+
+        for raw in escaped_string.split("\n"):
+            row, self.dialect = split_data_line(raw, self.dialect)
+
+            row_tuples.append(tuple(
+                [self.attributes[i].parse_data(row[i]) for i in elems]))
+
+        return np.array(row_tuples,
+                        [(a.name, a.dtype) for a in self.attributes])
+
+    def __str__(self):
+        return (super().__str__() + '\n\t' +
+                '\n\t'.join(str(a) for a in self.attributes))
+
+
+# -----------------
+# Various utilities
+# -----------------
+def to_attribute(name, attr_string):
+    attr_classes = (NominalAttribute, NumericAttribute, DateAttribute,
+                    StringAttribute, RelationalAttribute)
+
+    for cls in attr_classes:
+        attr = cls.parse_attribute(name, attr_string)
+        if attr is not None:
+            return attr
+
+    raise ParseArffError("unknown attribute %s" % attr_string)
+
+
+def csv_sniffer_has_bug_last_field():
+    """
+    Checks if the bug https://bugs.python.org/issue30157 is unpatched.
+    """
+
+    # We only compute this once.
+    has_bug = getattr(csv_sniffer_has_bug_last_field, "has_bug", None)
+
+    if has_bug is None:
+        dialect = csv.Sniffer().sniff("3, 'a'")
+        csv_sniffer_has_bug_last_field.has_bug = dialect.quotechar != "'"
+        has_bug = csv_sniffer_has_bug_last_field.has_bug
+
+    return has_bug
+
+
+def workaround_csv_sniffer_bug_last_field(sniff_line, dialect, delimiters):
+    """
+    Workaround for the bug https://bugs.python.org/issue30157 if is unpatched.
+    """
+    if csv_sniffer_has_bug_last_field():
+        # Reuses code from the csv module
+        right_regex = r'(?P<delim>[^\w\n"\'])(?P<space> ?)(?P<quote>["\']).*?(?P=quote)(?:$|\n)'  # noqa: E501
+
+        for restr in (r'(?P<delim>[^\w\n"\'])(?P<space> ?)(?P<quote>["\']).*?(?P=quote)(?P=delim)',  # ,".*?",  # noqa: E501
+                      r'(?:^|\n)(?P<quote>["\']).*?(?P=quote)(?P<delim>[^\w\n"\'])(?P<space> ?)',  # .*?",  # noqa: E501
+                      right_regex,  # ,".*?"
+                      r'(?:^|\n)(?P<quote>["\']).*?(?P=quote)(?:$|\n)'):  # ".*?" (no delim, no space)  # noqa: E501
+            regexp = re.compile(restr, re.DOTALL | re.MULTILINE)
+            matches = regexp.findall(sniff_line)
+            if matches:
+                break
+
+        # If it does not match the expression that was bugged,
+        # then this bug does not apply
+        if restr != right_regex:
+            return
+
+        groupindex = regexp.groupindex
+
+        # There is only one end of the string
+        assert len(matches) == 1
+        m = matches[0]
+
+        n = groupindex['quote'] - 1
+        quote = m[n]
+
+        n = groupindex['delim'] - 1
+        delim = m[n]
+
+        n = groupindex['space'] - 1
+        space = bool(m[n])
+
+        dq_regexp = re.compile(
+            rf"(({re.escape(delim)})|^)\W*{quote}[^{re.escape(delim)}\n]*{quote}[^{re.escape(delim)}\n]*{quote}\W*(({re.escape(delim)})|$)", re.MULTILINE  # noqa: E501
+        )
+
+        doublequote = bool(dq_regexp.search(sniff_line))
+
+        dialect.quotechar = quote
+        if delim in delimiters:
+            dialect.delimiter = delim
+        dialect.doublequote = doublequote
+        dialect.skipinitialspace = space
+
+
+def split_data_line(line, dialect=None):
+    delimiters = ",\t"
+
+    # This can not be done in a per reader basis, and relational fields
+    # can be HUGE
+    csv.field_size_limit(int(ctypes.c_ulong(-1).value // 2))
+
+    # Remove the line end if any
+    if line[-1] == '\n':
+        line = line[:-1]
+    
+    # Remove potential trailing whitespace
+    line = line.strip()
+    
+    sniff_line = line
+
+    # Add a delimiter if none is present, so that the csv.Sniffer
+    # does not complain for a single-field CSV.
+    if not any(d in line for d in delimiters):
+        sniff_line += ","
+
+    if dialect is None:
+        dialect = csv.Sniffer().sniff(sniff_line, delimiters=delimiters)
+        workaround_csv_sniffer_bug_last_field(sniff_line=sniff_line,
+                                              dialect=dialect,
+                                              delimiters=delimiters)
+
+    row = next(csv.reader([line], dialect))
+
+    return row, dialect
+
+
+# --------------
+# Parsing header
+# --------------
+def tokenize_attribute(iterable, attribute):
+    """Parse a raw string in header (e.g., starts by @attribute).
+
+    Given a raw string attribute, try to get the name and type of the
+    attribute. Constraints:
+
+    * The first line must start with @attribute (case insensitive, and
+      space like characters before @attribute are allowed)
+    * Works also if the attribute is spread on multilines.
+    * Works if empty lines or comments are in between
+
+    Parameters
+    ----------
+    attribute : str
+       the attribute string.
+
+    Returns
+    -------
+    name : str
+       name of the attribute
+    value : str
+       value of the attribute
+    next : str
+       next line to be parsed
+
+    Examples
+    --------
+    If attribute is a string defined in python as r"floupi real", will
+    return floupi as name, and real as value.
+
+    >>> from scipy.io.arff._arffread import tokenize_attribute
+    >>> iterable = iter([0] * 10) # dummy iterator
+    >>> tokenize_attribute(iterable, r"@attribute floupi real")
+    ('floupi', 'real', 0)
+
+    If attribute is r"'floupi 2' real", will return 'floupi 2' as name,
+    and real as value.
+
+    >>> tokenize_attribute(iterable, r"  @attribute 'floupi 2' real   ")
+    ('floupi 2', 'real', 0)
+
+    """
+    sattr = attribute.strip()
+    mattr = r_attribute.match(sattr)
+    if mattr:
+        # atrv is everything after @attribute
+        atrv = mattr.group(1)
+        if r_comattrval.match(atrv):
+            name, type = tokenize_single_comma(atrv)
+            next_item = next(iterable)
+        elif r_wcomattrval.match(atrv):
+            name, type = tokenize_single_wcomma(atrv)
+            next_item = next(iterable)
+        else:
+            # Not sure we should support this, as it does not seem supported by
+            # weka.
+            raise ValueError("multi line not supported yet")
+    else:
+        raise ValueError("First line unparsable: %s" % sattr)
+
+    attribute = to_attribute(name, type)
+
+    if type.lower() == 'relational':
+        next_item = read_relational_attribute(iterable, attribute, next_item)
+    #    raise ValueError("relational attributes not supported yet")
+
+    return attribute, next_item
+
+
+def tokenize_single_comma(val):
+    # XXX we match twice the same string (here and at the caller level). It is
+    # stupid, but it is easier for now...
+    m = r_comattrval.match(val)
+    if m:
+        try:
+            name = m.group(1).strip()
+            type = m.group(2).strip()
+        except IndexError as e:
+            raise ValueError("Error while tokenizing attribute") from e
+    else:
+        raise ValueError("Error while tokenizing single %s" % val)
+    return name, type
+
+
+def tokenize_single_wcomma(val):
+    # XXX we match twice the same string (here and at the caller level). It is
+    # stupid, but it is easier for now...
+    m = r_wcomattrval.match(val)
+    if m:
+        try:
+            name = m.group(1).strip()
+            type = m.group(2).strip()
+        except IndexError as e:
+            raise ValueError("Error while tokenizing attribute") from e
+    else:
+        raise ValueError("Error while tokenizing single %s" % val)
+    return name, type
+
+
+def read_relational_attribute(ofile, relational_attribute, i):
+    """Read the nested attributes of a relational attribute"""
+
+    r_end_relational = re.compile(r'^@[Ee][Nn][Dd]\s*' +
+                                  relational_attribute.name + r'\s*$')
+
+    while not r_end_relational.match(i):
+        m = r_headerline.match(i)
+        if m:
+            isattr = r_attribute.match(i)
+            if isattr:
+                attr, i = tokenize_attribute(ofile, i)
+                relational_attribute.attributes.append(attr)
+            else:
+                raise ValueError("Error parsing line %s" % i)
+        else:
+            i = next(ofile)
+
+    i = next(ofile)
+    return i
+
+
+def read_header(ofile):
+    """Read the header of the iterable ofile."""
+    i = next(ofile)
+
+    # Pass first comments
+    while r_comment.match(i):
+        i = next(ofile)
+
+    # Header is everything up to DATA attribute ?
+    relation = None
+    attributes = []
+    while not r_datameta.match(i):
+        m = r_headerline.match(i)
+        if m:
+            isattr = r_attribute.match(i)
+            if isattr:
+                attr, i = tokenize_attribute(ofile, i)
+                attributes.append(attr)
+            else:
+                isrel = r_relation.match(i)
+                if isrel:
+                    relation = isrel.group(1)
+                else:
+                    raise ValueError("Error parsing line %s" % i)
+                i = next(ofile)
+        else:
+            i = next(ofile)
+
+    return relation, attributes
+
+
+class MetaData:
+    """Small container to keep useful information on a ARFF dataset.
+
+    Knows about attributes names and types.
+
+    Examples
+    --------
+    ::
+
+        data, meta = loadarff('iris.arff')
+        # This will print the attributes names of the iris.arff dataset
+        for i in meta:
+            print(i)
+        # This works too
+        meta.names()
+        # Getting attribute type
+        types = meta.types()
+
+    Methods
+    -------
+    names
+    types
+
+    Notes
+    -----
+    Also maintains the list of attributes in order, i.e., doing for i in
+    meta, where meta is an instance of MetaData, will return the
+    different attribute names in the order they were defined.
+    """
+    def __init__(self, rel, attr):
+        self.name = rel
+        self._attributes = {a.name: a for a in attr}
+
+    def __repr__(self):
+        msg = ""
+        msg += "Dataset: %s\n" % self.name
+        for i in self._attributes:
+            msg += f"\t{i}'s type is {self._attributes[i].type_name}"
+            if self._attributes[i].range:
+                msg += ", range is %s" % str(self._attributes[i].range)
+            msg += '\n'
+        return msg
+
+    def __iter__(self):
+        return iter(self._attributes)
+
+    def __getitem__(self, key):
+        attr = self._attributes[key]
+
+        return (attr.type_name, attr.range)
+
+    def names(self):
+        """Return the list of attribute names.
+
+        Returns
+        -------
+        attrnames : list of str
+            The attribute names.
+        """
+        return list(self._attributes)
+
+    def types(self):
+        """Return the list of attribute types.
+
+        Returns
+        -------
+        attr_types : list of str
+            The attribute types.
+        """
+        attr_types = [self._attributes[name].type_name
+                      for name in self._attributes]
+        return attr_types
+
+
+def loadarff(f):
+    """
+    Read an arff file.
+
+    The data is returned as a record array, which can be accessed much like
+    a dictionary of NumPy arrays. For example, if one of the attributes is
+    called 'pressure', then its first 10 data points can be accessed from the
+    ``data`` record array like so: ``data['pressure'][0:10]``
+
+
+    Parameters
+    ----------
+    f : file-like or str
+       File-like object to read from, or filename to open.
+
+    Returns
+    -------
+    data : record array
+       The data of the arff file, accessible by attribute names.
+    meta : `MetaData`
+       Contains information about the arff file such as name and
+       type of attributes, the relation (name of the dataset), etc.
+
+    Raises
+    ------
+    ParseArffError
+        This is raised if the given file is not ARFF-formatted.
+    NotImplementedError
+        The ARFF file has an attribute which is not supported yet.
+
+    Notes
+    -----
+
+    This function should be able to read most arff files. Not
+    implemented functionality include:
+
+    * date type attributes
+    * string type attributes
+
+    It can read files with numeric and nominal attributes. It cannot read
+    files with sparse data ({} in the file). However, this function can
+    read files with missing data (? in the file), representing the data
+    points as NaNs.
+
+    Examples
+    --------
+    >>> from scipy.io import arff
+    >>> from io import StringIO
+    >>> content = \"\"\"
+    ... @relation foo
+    ... @attribute width  numeric
+    ... @attribute height numeric
+    ... @attribute color  {red,green,blue,yellow,black}
+    ... @data
+    ... 5.0,3.25,blue
+    ... 4.5,3.75,green
+    ... 3.0,4.00,red
+    ... \"\"\"
+    >>> f = StringIO(content)
+    >>> data, meta = arff.loadarff(f)
+    >>> data
+    array([(5.0, 3.25, 'blue'), (4.5, 3.75, 'green'), (3.0, 4.0, 'red')],
+          dtype=[('width', '<f8'), ('height', '<f8'), ('color', '|S6')])
+    >>> meta
+    Dataset: foo
+    \twidth's type is numeric
+    \theight's type is numeric
+    \tcolor's type is nominal, range is ('red', 'green', 'blue', 'yellow', 'black')
+
+    """
+    if hasattr(f, 'read'):
+        ofile = f
+    else:
+        ofile = open(f)
+    try:
+        return _loadarff(ofile)
+    finally:
+        if ofile is not f:  # only close what we opened
+            ofile.close()
+
+
+def _loadarff(ofile):
+    # Parse the header file
+    try:
+        rel, attr = read_header(ofile)
+    except ValueError as e:
+        msg = "Error while parsing header, error was: " + str(e)
+        raise ParseArffError(msg) from e
+
+    # Check whether we have a string attribute (not supported yet)
+    hasstr = False
+    for a in attr:
+        if isinstance(a, StringAttribute):
+            hasstr = True
+
+    meta = MetaData(rel, attr)
+
+    # XXX The following code is not great
+    # Build the type descriptor descr and the list of converters to convert
+    # each attribute to the suitable type (which should match the one in
+    # descr).
+
+    # This can be used once we want to support integer as integer values and
+    # not as numeric anymore (using masked arrays ?).
+
+    if hasstr:
+        # How to support string efficiently ? Ideally, we should know the max
+        # size of the string before allocating the numpy array.
+        raise NotImplementedError("String attributes not supported yet, sorry")
+
+    ni = len(attr)
+
+    def generator(row_iter, delim=','):
+        # TODO: this is where we are spending time (~80%). I think things
+        # could be made more efficiently:
+        #   - We could for example "compile" the function, because some values
+        #   do not change here.
+        #   - The function to convert a line to dtyped values could also be
+        #   generated on the fly from a string and be executed instead of
+        #   looping.
+        #   - The regex are overkill: for comments, checking that a line starts
+        #   by % should be enough and faster, and for empty lines, same thing
+        #   --> this does not seem to change anything.
+
+        # 'compiling' the range since it does not change
+        # Note, I have already tried zipping the converters and
+        # row elements and got slightly worse performance.
+        elems = list(range(ni))
+
+        dialect = None
+        for raw in row_iter:
+            # We do not abstract skipping comments and empty lines for
+            # performance reasons.
+            if r_comment.match(raw) or r_empty.match(raw):
+                continue
+
+            row, dialect = split_data_line(raw, dialect)
+
+            yield tuple([attr[i].parse_data(row[i]) for i in elems])
+
+    a = list(generator(ofile))
+    # No error should happen here: it is a bug otherwise
+    data = np.array(a, [(a.name, a.dtype) for a in attr])
+    return data, meta
+
+
+# ----
+# Misc
+# ----
+def basic_stats(data):
+    nbfac = data.size * 1. / (data.size - 1)
+    return np.nanmin(data), np.nanmax(data), np.mean(data), np.std(data) * nbfac
+
+
+def print_attribute(name, tp, data):
+    type = tp.type_name
+    if type == 'numeric' or type == 'real' or type == 'integer':
+        min, max, mean, std = basic_stats(data)
+        print(f"{name},{type},{min:f},{max:f},{mean:f},{std:f}")
+    else:
+        print(str(tp))
+
+
+def test_weka(filename):
+    data, meta = loadarff(filename)
+    print(len(data.dtype))
+    print(data.size)
+    for i in meta:
+        print_attribute(i, meta[i], data[i])
+
+
+# make sure nose does not find this as a test
+test_weka.__test__ = False
+
+
+if __name__ == '__main__':
+    import sys
+    filename = sys.argv[1]
+    test_weka(filename)

venv/lib/python3.10/site-packages/scipy/io/arff/arffread.py

@@ -0,0 +1,28 @@
+# This file is not meant for public use and will be removed in SciPy v2.0.0.
+# Use the `scipy.io.arff` namespace for importing the functions
+# included below.
+
+from scipy._lib.deprecation import _sub_module_deprecation
+
+__all__ = [  # noqa: F822
+    'MetaData', 'loadarff', 'ArffError', 'ParseArffError',
+    'r_meta', 'r_comment', 'r_empty', 'r_headerline',
+    'r_datameta', 'r_relation', 'r_attribute', 'r_nominal',
+    'r_date', 'r_comattrval', 'r_wcomattrval', 'Attribute',
+    'NominalAttribute', 'NumericAttribute', 'StringAttribute',
+    'DateAttribute', 'RelationalAttribute', 'to_attribute',
+    'csv_sniffer_has_bug_last_field', 'workaround_csv_sniffer_bug_last_field',
+    'split_data_line', 'tokenize_attribute', 'tokenize_single_comma',
+    'tokenize_single_wcomma', 'read_relational_attribute', 'read_header',
+    'basic_stats', 'print_attribute', 'test_weka'
+]
+
+
+def __dir__():
+    return __all__
+
+
+def __getattr__(name):
+    return _sub_module_deprecation(sub_package="io.arff", module="arffread",
+                                   private_modules=["_arffread"], all=__all__,
+                                   attribute=name)

venv/lib/python3.10/site-packages/scipy/io/arff/tests/data/iris.arff

@@ -0,0 +1,225 @@
+% 1. Title: Iris Plants Database
+% 
+% 2. Sources:
+%      (a) Creator: R.A. Fisher
+%      (b) Donor: Michael Marshall (MARSHALL%[email protected])
+%      (c) Date: July, 1988
+% 
+% 3. Past Usage:
+%    - Publications: too many to mention!!!  Here are a few.
+%    1. Fisher,R.A. "The use of multiple measurements in taxonomic problems"
+%       Annual Eugenics, 7, Part II, 179-188 (1936); also in "Contributions
+%       to Mathematical Statistics" (John Wiley, NY, 1950).
+%    2. Duda,R.O., & Hart,P.E. (1973) Pattern Classification and Scene Analysis.
+%       (Q327.D83) John Wiley & Sons.  ISBN 0-471-22361-1.  See page 218.
+%    3. Dasarathy, B.V. (1980) "Nosing Around the Neighborhood: A New System
+%       Structure and Classification Rule for Recognition in Partially Exposed
+%       Environments".  IEEE Transactions on Pattern Analysis and Machine
+%       Intelligence, Vol. PAMI-2, No. 1, 67-71.
+%       -- Results:
+%          -- very low misclassification rates (0% for the setosa class)
+%    4. Gates, G.W. (1972) "The Reduced Nearest Neighbor Rule".  IEEE 
+%       Transactions on Information Theory, May 1972, 431-433.
+%       -- Results:
+%          -- very low misclassification rates again
+%    5. See also: 1988 MLC Proceedings, 54-64.  Cheeseman et al's AUTOCLASS II
+%       conceptual clustering system finds 3 classes in the data.
+% 
+% 4. Relevant Information:
+%    --- This is perhaps the best known database to be found in the pattern
+%        recognition literature.  Fisher's paper is a classic in the field
+%        and is referenced frequently to this day.  (See Duda & Hart, for
+%        example.)  The data set contains 3 classes of 50 instances each,
+%        where each class refers to a type of iris plant.  One class is
+%        linearly separable from the other 2; the latter are NOT linearly
+%        separable from each other.
+%    --- Predicted attribute: class of iris plant.
+%    --- This is an exceedingly simple domain.
+% 
+% 5. Number of Instances: 150 (50 in each of three classes)
+% 
+% 6. Number of Attributes: 4 numeric, predictive attributes and the class
+% 
+% 7. Attribute Information:
+%    1. sepal length in cm
+%    2. sepal width in cm
+%    3. petal length in cm
+%    4. petal width in cm
+%    5. class: 
+%       -- Iris Setosa
+%       -- Iris Versicolour
+%       -- Iris Virginica
+% 
+% 8. Missing Attribute Values: None
+% 
+% Summary Statistics:
+%  	           Min  Max   Mean    SD   Class Correlation
+%    sepal length: 4.3  7.9   5.84  0.83    0.7826   
+%     sepal width: 2.0  4.4   3.05  0.43   -0.4194
+%    petal length: 1.0  6.9   3.76  1.76    0.9490  (high!)
+%     petal width: 0.1  2.5   1.20  0.76    0.9565  (high!)
+% 
+% 9. Class Distribution: 33.3% for each of 3 classes.
+
+@RELATION iris
+
+@ATTRIBUTE sepallength	REAL
+@ATTRIBUTE sepalwidth 	REAL
+@ATTRIBUTE petallength 	REAL
+@ATTRIBUTE petalwidth	REAL
+@ATTRIBUTE class 	{Iris-setosa,Iris-versicolor,Iris-virginica}
+
+@DATA
+5.1,3.5,1.4,0.2,Iris-setosa
+4.9,3.0,1.4,0.2,Iris-setosa
+4.7,3.2,1.3,0.2,Iris-setosa
+4.6,3.1,1.5,0.2,Iris-setosa
+5.0,3.6,1.4,0.2,Iris-setosa
+5.4,3.9,1.7,0.4,Iris-setosa
+4.6,3.4,1.4,0.3,Iris-setosa
+5.0,3.4,1.5,0.2,Iris-setosa
+4.4,2.9,1.4,0.2,Iris-setosa
+4.9,3.1,1.5,0.1,Iris-setosa
+5.4,3.7,1.5,0.2,Iris-setosa
+4.8,3.4,1.6,0.2,Iris-setosa
+4.8,3.0,1.4,0.1,Iris-setosa
+4.3,3.0,1.1,0.1,Iris-setosa
+5.8,4.0,1.2,0.2,Iris-setosa
+5.7,4.4,1.5,0.4,Iris-setosa
+5.4,3.9,1.3,0.4,Iris-setosa
+5.1,3.5,1.4,0.3,Iris-setosa
+5.7,3.8,1.7,0.3,Iris-setosa
+5.1,3.8,1.5,0.3,Iris-setosa
+5.4,3.4,1.7,0.2,Iris-setosa
+5.1,3.7,1.5,0.4,Iris-setosa
+4.6,3.6,1.0,0.2,Iris-setosa
+5.1,3.3,1.7,0.5,Iris-setosa
+4.8,3.4,1.9,0.2,Iris-setosa
+5.0,3.0,1.6,0.2,Iris-setosa
+5.0,3.4,1.6,0.4,Iris-setosa
+5.2,3.5,1.5,0.2,Iris-setosa
+5.2,3.4,1.4,0.2,Iris-setosa
+4.7,3.2,1.6,0.2,Iris-setosa
+4.8,3.1,1.6,0.2,Iris-setosa
+5.4,3.4,1.5,0.4,Iris-setosa
+5.2,4.1,1.5,0.1,Iris-setosa
+5.5,4.2,1.4,0.2,Iris-setosa
+4.9,3.1,1.5,0.1,Iris-setosa
+5.0,3.2,1.2,0.2,Iris-setosa
+5.5,3.5,1.3,0.2,Iris-setosa
+4.9,3.1,1.5,0.1,Iris-setosa
+4.4,3.0,1.3,0.2,Iris-setosa
+5.1,3.4,1.5,0.2,Iris-setosa
+5.0,3.5,1.3,0.3,Iris-setosa
+4.5,2.3,1.3,0.3,Iris-setosa
+4.4,3.2,1.3,0.2,Iris-setosa
+5.0,3.5,1.6,0.6,Iris-setosa
+5.1,3.8,1.9,0.4,Iris-setosa
+4.8,3.0,1.4,0.3,Iris-setosa
+5.1,3.8,1.6,0.2,Iris-setosa
+4.6,3.2,1.4,0.2,Iris-setosa
+5.3,3.7,1.5,0.2,Iris-setosa
+5.0,3.3,1.4,0.2,Iris-setosa
+7.0,3.2,4.7,1.4,Iris-versicolor
+6.4,3.2,4.5,1.5,Iris-versicolor
+6.9,3.1,4.9,1.5,Iris-versicolor
+5.5,2.3,4.0,1.3,Iris-versicolor
+6.5,2.8,4.6,1.5,Iris-versicolor
+5.7,2.8,4.5,1.3,Iris-versicolor
+6.3,3.3,4.7,1.6,Iris-versicolor
+4.9,2.4,3.3,1.0,Iris-versicolor
+6.6,2.9,4.6,1.3,Iris-versicolor
+5.2,2.7,3.9,1.4,Iris-versicolor
+5.0,2.0,3.5,1.0,Iris-versicolor
+5.9,3.0,4.2,1.5,Iris-versicolor
+6.0,2.2,4.0,1.0,Iris-versicolor
+6.1,2.9,4.7,1.4,Iris-versicolor
+5.6,2.9,3.6,1.3,Iris-versicolor
+6.7,3.1,4.4,1.4,Iris-versicolor
+5.6,3.0,4.5,1.5,Iris-versicolor
+5.8,2.7,4.1,1.0,Iris-versicolor
+6.2,2.2,4.5,1.5,Iris-versicolor
+5.6,2.5,3.9,1.1,Iris-versicolor
+5.9,3.2,4.8,1.8,Iris-versicolor
+6.1,2.8,4.0,1.3,Iris-versicolor
+6.3,2.5,4.9,1.5,Iris-versicolor
+6.1,2.8,4.7,1.2,Iris-versicolor
+6.4,2.9,4.3,1.3,Iris-versicolor
+6.6,3.0,4.4,1.4,Iris-versicolor
+6.8,2.8,4.8,1.4,Iris-versicolor
+6.7,3.0,5.0,1.7,Iris-versicolor
+6.0,2.9,4.5,1.5,Iris-versicolor
+5.7,2.6,3.5,1.0,Iris-versicolor
+5.5,2.4,3.8,1.1,Iris-versicolor
+5.5,2.4,3.7,1.0,Iris-versicolor
+5.8,2.7,3.9,1.2,Iris-versicolor
+6.0,2.7,5.1,1.6,Iris-versicolor
+5.4,3.0,4.5,1.5,Iris-versicolor
+6.0,3.4,4.5,1.6,Iris-versicolor
+6.7,3.1,4.7,1.5,Iris-versicolor
+6.3,2.3,4.4,1.3,Iris-versicolor
+5.6,3.0,4.1,1.3,Iris-versicolor
+5.5,2.5,4.0,1.3,Iris-versicolor
+5.5,2.6,4.4,1.2,Iris-versicolor
+6.1,3.0,4.6,1.4,Iris-versicolor
+5.8,2.6,4.0,1.2,Iris-versicolor
+5.0,2.3,3.3,1.0,Iris-versicolor
+5.6,2.7,4.2,1.3,Iris-versicolor
+5.7,3.0,4.2,1.2,Iris-versicolor
+5.7,2.9,4.2,1.3,Iris-versicolor
+6.2,2.9,4.3,1.3,Iris-versicolor
+5.1,2.5,3.0,1.1,Iris-versicolor
+5.7,2.8,4.1,1.3,Iris-versicolor
+6.3,3.3,6.0,2.5,Iris-virginica
+5.8,2.7,5.1,1.9,Iris-virginica
+7.1,3.0,5.9,2.1,Iris-virginica
+6.3,2.9,5.6,1.8,Iris-virginica
+6.5,3.0,5.8,2.2,Iris-virginica
+7.6,3.0,6.6,2.1,Iris-virginica
+4.9,2.5,4.5,1.7,Iris-virginica
+7.3,2.9,6.3,1.8,Iris-virginica
+6.7,2.5,5.8,1.8,Iris-virginica
+7.2,3.6,6.1,2.5,Iris-virginica
+6.5,3.2,5.1,2.0,Iris-virginica
+6.4,2.7,5.3,1.9,Iris-virginica
+6.8,3.0,5.5,2.1,Iris-virginica
+5.7,2.5,5.0,2.0,Iris-virginica
+5.8,2.8,5.1,2.4,Iris-virginica
+6.4,3.2,5.3,2.3,Iris-virginica
+6.5,3.0,5.5,1.8,Iris-virginica
+7.7,3.8,6.7,2.2,Iris-virginica
+7.7,2.6,6.9,2.3,Iris-virginica
+6.0,2.2,5.0,1.5,Iris-virginica
+6.9,3.2,5.7,2.3,Iris-virginica
+5.6,2.8,4.9,2.0,Iris-virginica
+7.7,2.8,6.7,2.0,Iris-virginica
+6.3,2.7,4.9,1.8,Iris-virginica
+6.7,3.3,5.7,2.1,Iris-virginica
+7.2,3.2,6.0,1.8,Iris-virginica
+6.2,2.8,4.8,1.8,Iris-virginica
+6.1,3.0,4.9,1.8,Iris-virginica
+6.4,2.8,5.6,2.1,Iris-virginica
+7.2,3.0,5.8,1.6,Iris-virginica
+7.4,2.8,6.1,1.9,Iris-virginica
+7.9,3.8,6.4,2.0,Iris-virginica
+6.4,2.8,5.6,2.2,Iris-virginica
+6.3,2.8,5.1,1.5,Iris-virginica
+6.1,2.6,5.6,1.4,Iris-virginica
+7.7,3.0,6.1,2.3,Iris-virginica
+6.3,3.4,5.6,2.4,Iris-virginica
+6.4,3.1,5.5,1.8,Iris-virginica
+6.0,3.0,4.8,1.8,Iris-virginica
+6.9,3.1,5.4,2.1,Iris-virginica
+6.7,3.1,5.6,2.4,Iris-virginica
+6.9,3.1,5.1,2.3,Iris-virginica
+5.8,2.7,5.1,1.9,Iris-virginica
+6.8,3.2,5.9,2.3,Iris-virginica
+6.7,3.3,5.7,2.5,Iris-virginica
+6.7,3.0,5.2,2.3,Iris-virginica
+6.3,2.5,5.0,1.9,Iris-virginica
+6.5,3.0,5.2,2.0,Iris-virginica
+6.2,3.4,5.4,2.3,Iris-virginica
+5.9,3.0,5.1,1.8,Iris-virginica
+%
+%
+%

venv/lib/python3.10/site-packages/scipy/io/arff/tests/data/missing.arff

@@ -0,0 +1,8 @@
+% This arff file contains some missing data
+@relation missing
+@attribute yop real
+@attribute yap real
+@data
+1,5
+2,4
+?,?

venv/lib/python3.10/site-packages/scipy/io/arff/tests/data/nodata.arff

@@ -0,0 +1,11 @@
+@RELATION iris
+
+@ATTRIBUTE sepallength  REAL
+@ATTRIBUTE sepalwidth   REAL
+@ATTRIBUTE petallength  REAL
+@ATTRIBUTE petalwidth   REAL
+@ATTRIBUTE class    {Iris-setosa,Iris-versicolor,Iris-virginica}
+
+@DATA
+
+% This file has no data

venv/lib/python3.10/site-packages/scipy/io/arff/tests/data/quoted_nominal.arff

@@ -0,0 +1,13 @@
+% Regression test for issue #10232 : Exception in loadarff with quoted nominal attributes
+% Spaces between elements are stripped by the parser
+
+@relation SOME_DATA
+@attribute age numeric
+@attribute smoker {'yes', 'no'}
+@data
+18,  'no'
+24, 'yes'
+44,     'no'
+56, 'no'
+89,'yes'
+11,  'no'

venv/lib/python3.10/site-packages/scipy/io/arff/tests/data/quoted_nominal_spaces.arff

@@ -0,0 +1,13 @@
+% Regression test for issue #10232 : Exception in loadarff with quoted nominal attributes
+% Spaces inside quotes are NOT stripped by the parser
+
+@relation SOME_DATA
+@attribute age numeric
+@attribute smoker {'  yes', 'no  '}
+@data
+18,'no  '
+24,'  yes'
+44,'no  '
+56,'no  '
+89,'  yes'
+11,'no  '

venv/lib/python3.10/site-packages/scipy/io/arff/tests/data/test1.arff

@@ -0,0 +1,10 @@
+@RELATION test1
+
+@ATTRIBUTE attr0	REAL
+@ATTRIBUTE attr1 	REAL
+@ATTRIBUTE attr2 	REAL
+@ATTRIBUTE attr3	REAL
+@ATTRIBUTE class 	{class0, class1, class2, class3}
+
+@DATA
+0.1, 0.2, 0.3, 0.4,class1

venv/lib/python3.10/site-packages/scipy/io/arff/tests/data/test11.arff

@@ -0,0 +1,11 @@
+@RELATION test11
+
+@ATTRIBUTE attr0	REAL
+@ATTRIBUTE attr1 	REAL
+@ATTRIBUTE attr2 	REAL
+@ATTRIBUTE attr3	REAL
+@ATTRIBUTE class 	{ class0, class1, class2, class3 }
+@DATA
+0.1, 0.2, 0.3, 0.4,class1
+-0.1, -0.2, -0.3, -0.4,class2
+1, 2, 3, 4,class3

venv/lib/python3.10/site-packages/scipy/io/arff/tests/data/test2.arff

@@ -0,0 +1,15 @@
+@RELATION test2
+
+@ATTRIBUTE attr0	REAL
+@ATTRIBUTE attr1 	real
+@ATTRIBUTE attr2 	integer
+@ATTRIBUTE attr3	Integer
+@ATTRIBUTE attr4 	Numeric
+@ATTRIBUTE attr5	numeric
+@ATTRIBUTE attr6 	string
+@ATTRIBUTE attr7 	STRING
+@ATTRIBUTE attr8 	{bla}
+@ATTRIBUTE attr9 	{bla, bla}
+
+@DATA
+0.1, 0.2, 0.3, 0.4,class1

venv/lib/python3.10/site-packages/scipy/io/arff/tests/data/test3.arff

@@ -0,0 +1,6 @@
+@RELATION test3
+
+@ATTRIBUTE attr0	crap
+
+@DATA
+0.1, 0.2, 0.3, 0.4,class1

venv/lib/python3.10/site-packages/scipy/io/arff/tests/data/test4.arff

@@ -0,0 +1,11 @@
+@RELATION test5
+
+@ATTRIBUTE attr0	REAL
+@ATTRIBUTE attr1 	REAL
+@ATTRIBUTE attr2 	REAL
+@ATTRIBUTE attr3	REAL
+@ATTRIBUTE class 	{class0, class1, class2, class3}
+@DATA
+0.1, 0.2, 0.3, 0.4,class1
+-0.1, -0.2, -0.3, -0.4,class2
+1, 2, 3, 4,class3

venv/lib/python3.10/site-packages/scipy/io/arff/tests/data/test5.arff

@@ -0,0 +1,26 @@
+@RELATION test4
+
+@ATTRIBUTE attr0	REAL
+@ATTRIBUTE attr1 	REAL
+@ATTRIBUTE attr2 	REAL
+@ATTRIBUTE attr3	REAL
+@ATTRIBUTE class 	{class0, class1, class2, class3}
+
+@DATA
+
+% lsdflkjhaksjdhf
+
+% lsdflkjhaksjdhf
+
+0.1, 0.2, 0.3, 0.4,class1
+% laksjdhf
+
+% lsdflkjhaksjdhf
+-0.1, -0.2, -0.3, -0.4,class2
+
+% lsdflkjhaksjdhf
+% lsdflkjhaksjdhf
+
+% lsdflkjhaksjdhf
+
+1, 2, 3, 4,class3

venv/lib/python3.10/site-packages/scipy/io/arff/tests/data/test6.arff

@@ -0,0 +1,12 @@
+@RELATION test6
+
+@ATTRIBUTE attr0	REAL
+@ATTRIBUTE attr1 	REAL
+@ATTRIBUTE attr2 	REAL
+@ATTRIBUTE attr3	REAL
+@ATTRIBUTE class 	{C}
+
+@DATA
+0.1, 0.2, 0.3, 0.4,C
+-0.1, -0.2, -0.3, -0.4,C
+1, 2, 3, 4,C

venv/lib/python3.10/site-packages/scipy/io/arff/tests/data/test7.arff

@@ -0,0 +1,15 @@
+@RELATION test7
+
+@ATTRIBUTE attr_year	DATE yyyy
+@ATTRIBUTE attr_month	DATE yyyy-MM
+@ATTRIBUTE attr_date	DATE yyyy-MM-dd
+@ATTRIBUTE attr_datetime_local	DATE "yyyy-MM-dd HH:mm"
+@ATTRIBUTE attr_datetime_missing	DATE "yyyy-MM-dd HH:mm"
+
+@DATA
+1999,1999-01,1999-01-31,"1999-01-31 00:01",?
+2004,2004-12,2004-12-01,"2004-12-01 23:59","2004-12-01 23:59"
+1817,1817-04,1817-04-28,"1817-04-28 13:00",?
+2100,2100-09,2100-09-10,"2100-09-10 12:00",?
+2013,2013-11,2013-11-30,"2013-11-30 04:55","2013-11-30 04:55"
+1631,1631-10,1631-10-15,"1631-10-15 20:04","1631-10-15 20:04"

venv/lib/python3.10/site-packages/scipy/io/arff/tests/data/test8.arff

@@ -0,0 +1,12 @@
+@RELATION test8
+
+@ATTRIBUTE attr_datetime_utc	DATE "yyyy-MM-dd HH:mm Z"
+@ATTRIBUTE attr_datetime_full	DATE "yy-MM-dd HH:mm:ss z"
+
+@DATA
+"1999-01-31 00:01 UTC","99-01-31 00:01:08 +0430"
+"2004-12-01 23:59 UTC","04-12-01 23:59:59 -0800"
+"1817-04-28 13:00 UTC","17-04-28 13:00:33 +1000"
+"2100-09-10 12:00 UTC","21-09-10 12:00:21 -0300"
+"2013-11-30 04:55 UTC","13-11-30 04:55:48 -1100"
+"1631-10-15 20:04 UTC","31-10-15 20:04:10 +0000"