uncompress_dataset.sh

#!/bin/bash

# Usage function
usage() {
    echo "Usage: $0 -s SOURCE_DIR -t TARGET_DIR [-c CHUNK_TYPE] [-m MAX_FILES] [-h]"
    echo "Uncompress chunked DeepFurniture dataset"
    echo ""
    echo "Required arguments:"
    echo "  -s SOURCE_DIR   Source directory containing the chunked dataset"
    echo "  -t TARGET_DIR   Target directory for the uncompressed dataset"
    echo ""
    echo "Optional arguments:"
    echo "  -c CHUNK_TYPE   Specific chunk type to process (scenes, furnitures, queries)"
    echo "                  If not specified, all chunk types will be processed"
    echo "  -m MAX_FILES    Maximum number of files to process per type (default: process all)"
    echo "  -h             Show this help message"
    exit 1
}

# Process command line arguments
while getopts "s:t:c:m:h" opt; do
    case $opt in
        s) SOURCE_DIR="$OPTARG";;
        t) TARGET_DIR="$OPTARG";;
        c) CHUNK_TYPE="$OPTARG";;
        m) MAX_FILES="$OPTARG";;
        h) usage;;
        ?) usage;;
    esac
done

# Check required arguments
if [ -z "$SOURCE_DIR" ] || [ -z "$TARGET_DIR" ]; then
    echo "Error: Source and target directories are required"
    usage
fi

# Validate source directory
if [ ! -d "$SOURCE_DIR" ]; then
    echo "Error: Source directory does not exist: $SOURCE_DIR"
    exit 1
fi

# Validate MAX_FILES if provided
if [ -n "$MAX_FILES" ]; then
    if ! [[ "$MAX_FILES" =~ ^[0-9]+$ ]]; then
        echo "Error: MAX_FILES must be a positive integer"
        exit 1
    fi
    echo "Will process maximum $MAX_FILES files per type"
fi

# Create target directory structure
mkdir -p "$TARGET_DIR"/{metadata,scenes,furnitures,queries}

# Copy metadata files (excluding index files)
echo "Copying metadata files..."
for file in "$SOURCE_DIR"/metadata/*.json*; do
    if [[ ! $file =~ _index.json$ ]]; then
        cp "$file" "$TARGET_DIR/metadata/"
    fi
done

# Function to process chunks of a specific type
process_chunks() {
    local type=$1
    local src_dir="$SOURCE_DIR/$type"
    local target_dir="$TARGET_DIR/$type"
    
    echo "Processing $type chunks..."
    
    # Check if source directory exists
    if [ ! -d "$src_dir" ]; then
        echo "Warning: Directory not found: $src_dir"
        return
    fi
    
    # Get list of chunks and sort them
    chunks=($(ls -v "$src_dir"/*.tar.gz 2>/dev/null))
    total_chunks=${#chunks[@]}
    
    if [ "$total_chunks" -eq 0 ]; then
        echo "No chunks found in $src_dir"
        return
    fi
    
    # Determine how many chunks to process based on MAX_FILES
    files_per_chunk=1000  # Default files per chunk based on dataset structure
    if [ -n "$MAX_FILES" ]; then
        chunks_needed=$(( (MAX_FILES + files_per_chunk - 1) / files_per_chunk ))
        if [ "$chunks_needed" -lt "$total_chunks" ]; then
            total_chunks=$chunks_needed
            echo "Limiting to $total_chunks chunks ($MAX_FILES files) for $type"
        fi
    fi
    
    # Process chunks
    for ((i = 0; i < total_chunks; i++)); do
        chunk="${chunks[$i]}"
        chunk_name=$(basename "$chunk")
        printf "Extracting %s (%d/%d)..." "$chunk_name" $((i + 1)) "$total_chunks"
        
        if tar -xzf "$chunk" -C "$target_dir" 2>/dev/null; then
            echo " done"
        else
            echo " failed"
            echo "Warning: Failed to extract $chunk_name"
        fi
        
        # If this is the last chunk and we have MAX_FILES set,
        # we might need to remove excess files
        if [ -n "$MAX_FILES" ] && [ "$i" -eq "$((total_chunks - 1))" ]; then
            # Calculate how many files we should have
            local expected_total=$MAX_FILES
            local current_total=$(ls "$target_dir" | wc -l)
            
            if [ "$current_total" -gt "$expected_total" ]; then
                echo "Trimming excess files to meet MAX_FILES limit..."
                # Remove excess files (keeping the first MAX_FILES files)
                ls "$target_dir" | sort | tail -n+"$((expected_total + 1))" | \
                    xargs -I {} rm -rf "$target_dir/{}"
            fi
        fi
    done
}

# Process chunks based on input
if [ -n "$CHUNK_TYPE" ]; then
    case "$CHUNK_TYPE" in
        scenes|furnitures|queries)
            process_chunks "$CHUNK_TYPE"
            ;;
        *)
            echo "Error: Invalid chunk type: $CHUNK_TYPE"
            echo "Valid types are: scenes, furnitures, queries"
            exit 1
            ;;
    esac
else
    # Process all chunk types
    for type in scenes furnitures queries; do
        process_chunks "$type"
    done
fi

# Basic validation
echo -e "\nValidating extracted files..."

# Check scenes
if [ -z "$CHUNK_TYPE" ] || [ "$CHUNK_TYPE" = "scenes" ]; then
    missing_files=0
    total_scenes=0
    for scene_dir in "$TARGET_DIR"/scenes/*; do
        if [ -d "$scene_dir" ]; then
            total_scenes=$((total_scenes + 1))
            for required in "image.jpg" "annotation.json"; do
                if [ ! -f "$scene_dir/$required" ]; then
                    echo "Warning: Missing $required in $(basename "$scene_dir")"
                    missing_files=$((missing_files + 1))
                fi
            done
        fi
    done
    echo "Scene validation complete. Processed $total_scenes scenes. Missing files: $missing_files"
fi

# Print final statistics
echo -e "\nExtraction Summary:"
for type in scenes furnitures queries; do
    if [ -z "$CHUNK_TYPE" ] || [ "$CHUNK_TYPE" = "$type" ]; then
        file_count=$(find "$TARGET_DIR/$type" -type f | wc -l)
        echo "$type: $file_count files"
    fi
done

echo "Dataset uncompression completed!"
echo "Output directory: $TARGET_DIR"