Step 6: Enhanced documentation with detailed README, CODE_OF_CONDUCT, CONTRIBUTING guide, and LICENSE

CODE_OF_CONDUCT.md

@@ -0,0 +1,69 @@
+# Contributor Covenant Code of Conduct
+
+## Our Pledge
+
+We as members, contributors, and leaders pledge to make participation in our
+community a harassment-free experience for everyone, regardless of age, body
+size, visible or invisible disability, ethnicity, sex characteristics, gender
+identity and expression, level of experience, education, socio-economic status,
+nationality, personal appearance, race, religion, or sexual identity
+and orientation.
+
+We pledge to act and interact in ways that contribute to an open, welcoming,
+diverse, inclusive, and healthy community.
+
+## Our Standards
+
+Examples of behavior that contributes to a positive environment for our
+community include:
+
+* Demonstrating empathy and kindness toward other people
+* Being respectful of differing opinions, viewpoints, and experiences
+* Giving and gracefully accepting constructive feedback
+* Accepting responsibility and apologizing to those affected by our mistakes,
+  and learning from the experience
+* Focusing on what is best not just for us as individuals, but for the
+  overall community
+
+Examples of unacceptable behavior include:
+
+* The use of sexualized language or imagery, and sexual attention or
+  advances of any kind
+* Trolling, insulting or derogatory comments, and personal or political attacks
+* Public or private harassment
+* Publishing others' private information, such as a physical or email
+  address, without their explicit permission
+* Other conduct which could reasonably be considered inappropriate in a
+  professional setting
+
+## Enforcement Responsibilities
+
+Project maintainers are responsible for clarifying and enforcing our standards of
+acceptable behavior and will take appropriate and fair corrective action in
+response to any behavior that they deem inappropriate, threatening, offensive,
+or harmful.
+
+Project maintainers have the right and responsibility to remove, edit, or reject
+comments, commits, code, wiki edits, issues, and other contributions that are
+not aligned to this Code of Conduct, and will communicate reasons for moderation
+decisions when appropriate.
+
+## Scope
+
+This Code of Conduct applies within all community spaces, and also applies when
+an individual is officially representing the community in public spaces.
+
+## Enforcement
+
+Instances of abusive, harassing, or otherwise unacceptable behavior may be
+reported to the project team. All complaints will be reviewed and investigated
+and will result in a response that is deemed necessary and appropriate to the
+circumstances.
+
+## Attribution
+
+This Code of Conduct is adapted from the [Contributor Covenant][homepage],
+version 2.0, available at
+https://www.contributor-covenant.org/version/2/0/code_of_conduct.html.
+
+[homepage]: https://www.contributor-covenant.org

CONTRIBUTING.md

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+# Contributing to TutorX-MCP
+
+Thank you for considering contributing to TutorX-MCP! This document outlines the process and guidelines for contributing to this project.
+
+## Code of Conduct
+
+This project and everyone participating in it is governed by our [Code of Conduct](CODE_OF_CONDUCT.md). By participating, you are expected to uphold this code.
+
+## How to Contribute
+
+### Reporting Bugs
+
+If you find a bug, please create an issue with the following information:
+
+1. A clear, descriptive title
+2. Steps to reproduce the issue
+3. Expected behavior
+4. Actual behavior
+5. Any relevant logs or screenshots
+6. Your environment (OS, Python version, etc.)
+
+### Suggesting Enhancements
+
+We welcome suggestions for enhancements! Please create an issue with:
+
+1. A clear, descriptive title
+2. Detailed description of the proposed enhancement
+3. Any specific use cases or examples
+4. Any relevant references or resources
+
+### Pull Requests
+
+We actively welcome pull requests:
+
+1. Fork the repo
+2. Create a branch from `main`
+3. Make your changes
+4. Ensure your code follows the project's style guide
+5. Run tests if available
+6. Create a pull request to `main`
+
+## Development Setup
+
+1. Clone the repository:
+   ```bash
+   git clone https://github.com/yourusername/tutorx-mcp.git
+   cd tutorx-mcp
+   ```
+
+2. Install dependencies:
+   ```bash
+   # Using uv (recommended)
+   uv install
+
+   # Or using pip
+   pip install -e .
+   ```
+
+3. Run the server:
+   ```bash
+   python run.py --mode both
+   ```
+
+## Project Structure
+
+- `main.py` - MCP server implementation
+- `app.py` - Gradio interface
+- `run.py` - Runner script
+- `utils/` - Utility modules
+  - `multimodal.py` - Multi-modal processing
+  - `assessment.py` - Assessment functions
+- `tools/` - Additional tools and utilities
+
+## Adding New Features
+
+When adding new features, please follow these guidelines:
+
+1. For MCP tools and resources:
+   - Add them to `main.py`
+   - Use proper type hints and docstrings
+   - Follow the existing pattern
+
+2. For Gradio interface components:
+   - Add them to `app.py`
+   - Match the style of existing components
+   - Ensure they interact properly with MCP tools
+
+3. For utility functions:
+   - Add them to appropriate files in `utils/`
+   - Include proper documentation and tests
+
+## Style Guide
+
+- Follow PEP 8 guidelines
+- Use meaningful variable and function names
+- Include docstrings for all functions and classes
+- Type hints are encouraged
+
+## License
+
+By contributing, you agree that your contributions will be licensed under the project's [MIT License](LICENSE).

LICENSE

@@ -0,0 +1,21 @@
+MIT License
+
+Copyright (c) 2025 TutorX-MCP Contributors
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

README.md

@@ -1,24 +1,58 @@
 # TutorX-MCP Server
 
-A Model Context Protocol (MCP) server for educational AI tutoring as specified in the PRD.
+A comprehensive Model Context Protocol (MCP) server for educational AI tutoring as specified in the Product Requirements Document (PRD).
 
 ## Overview
 
-TutorX-MCP is an adaptive, multi-modal, and collaborative AI tutoring platform that leverages the Model Context Protocol (MCP) for tool integration and provides APIs for educational features.
+TutorX-MCP is an adaptive, multi-modal, and collaborative AI tutoring platform that leverages the Model Context Protocol (MCP) for tool integration and Gradio for user-friendly interfaces. It provides a range of educational features accessible via both MCP clients and a dedicated web interface.
+
+![TutorX-MCP](https://via.placeholder.com/800x400?text=TutorX-MCP+Educational+Platform)
 
 ## Features
 
-- **Adaptive Learning Engine**: Concept graph, skill assessment, and personalized learning paths
-- **Assessment Suite**: Quiz generation, solution analysis
-- **Feedback System**: Error pattern analysis and contextual suggestions
-- **Multi-Modal Interaction**: Text-based Q&A (with planned voice and handwriting recognition)
+### Core Features
+
+- **Adaptive Learning Engine**
+  - Comprehensive concept graph
+  - Dynamic skill assessment and tracking
+  - Personalized learning paths
+
+- **Assessment Suite**
+  - Automated quiz and problem generation
+  - Step-by-step solution analysis
+  - Plagiarism and similarity detection
+
+- **Feedback System**
+  - Contextual error analysis and suggestions
+  - Error pattern recognition
+
+- **Multi-Modal Interaction**
+  - Text-based Q&A with error pattern recognition
+  - Voice recognition with analysis
+  - Handwriting recognition and digital ink processing
+
+### Advanced Features
+
+- **Neurological Engagement Monitor**
+  - Attention, cognitive load, and stress detection
+
+- **Cross-Institutional Knowledge Fusion**
+  - Curriculum alignment with national standards
+  - Content reconciliation
+
+- **Automated Lesson Authoring**
+  - AI-powered content generation
 
 ## Getting Started
 
 ### Prerequisites
 
 - Python 3.12 or higher
-- Dependencies as listed in pyproject.toml
+- Dependencies as listed in pyproject.toml:
+  - mcp[cli] >= 1.9.3
+  - gradio >= 4.19.0
+  - numpy >= 1.24.0
+  - pillow >= 10.0.0
 
 ### Installation
 
@@ -27,29 +61,83 @@ TutorX-MCP is an adaptive, multi-modal, and collaborative AI tutoring platform t
 git clone https://github.com/yourusername/tutorx-mcp.git
 cd tutorx-mcp
 
-# Install dependencies
+# Using uv (recommended)
 uv install
+
+# Or using pip
+pip install -e .
 ```
 
 ### Running the Server
 
+You can run the server in different modes:
+
 ```bash
-python main.py
+# MCP server only
+python run.py --mode mcp
+
+# Gradio interface only
+python run.py --mode gradio
+
+# Both MCP server and Gradio interface
+python run.py --mode both
+
+# Custom host and port
+python run.py --mode mcp --host 0.0.0.0 --port 9000
 ```
 
-By default, the server will run in development mode and you can access it at http://localhost:8000.
+By default, the MCP server will run at http://localhost:8000 and the Gradio interface at http://127.0.0.1:7860.
 
 ## MCP Tool Integration
 
-The server exposes MCP tools for:
-- Skill assessment
-- Quiz generation
-- Error pattern analysis
+The server exposes the following MCP tools and resources:
+
+### Tools
+- **Core Features**
+  - `assess_skill`: Evaluate student's skill level on specific concepts
+  - `generate_quiz`: Create quizzes for specific concepts
+  - `analyze_error_patterns`: Find common student mistakes
+
+- **Assessment**
+  - `create_assessment`: Generate complete assessments
+  - `grade_assessment`: Score student responses
+  - `check_submission_originality`: Detect plagiarism
+
+- **Advanced Features**
+  - `analyze_cognitive_state`: Process EEG data
+  - `align_content_to_standard`: Match content to curriculum standards
+  - `generate_lesson`: Create complete lesson plans
+
+- **Multi-Modal**
+  - `text_interaction`: Process text queries
+  - `voice_interaction`: Handle voice input
+  - `handwriting_recognition`: Process handwritten input
 
-And MCP resources for:
-- Concept graph
-- Learning paths
+### Resources
+- `concept-graph://`: Knowledge concept graph
+- `learning-path://{student_id}`: Personalized learning paths
+- `curriculum-standards://{country_code}`: National curricular standards
+- `student-dashboard://{student_id}`: Student performance dashboard
+
+## Project Structure
+
+```
+tutorx-mcp/
+├── main.py              # MCP server implementation
+├── app.py               # Gradio web interface
+├── run.py               # Runner script for different modes
+├── utils/               # Utility modules
+│   ├── multimodal.py    # Multi-modal processing utilities
+│   └── assessment.py    # Assessment and analytics functions
+├── pyproject.toml       # Project dependencies
+└── README.md            # Project documentation
+```
 
 ## License
 
-This project is licensed under the MIT License - see the LICENSE file for details.
+This project is licensed under the MIT License - see the LICENSE file for details.
+
+## Acknowledgments
+
+- Model Context Protocol (MCP) - https://modelcontextprotocol.io/
+- Gradio - https://gradio.app/