harshalmore31 commited on
Commit
e33b088
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1 Parent(s): 9d7d2e0

Refactor agent prompts for clarity and conciseness; updated and iteration limits for improved performance

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  1. mai_dx/main.py +43 -319
mai_dx/main.py CHANGED
@@ -574,345 +574,69 @@ This case has gone through {case_state.iteration} iterations. Focus on decisive
574
  if case_state:
575
  dynamic_context = self._get_dynamic_context(role, case_state)
576
 
 
577
  base_prompts = {
578
- AgentRole.HYPOTHESIS: f"""
579
- {dynamic_context}
580
-
581
- You are Dr. Hypothesis, a specialist in maintaining differential diagnoses. Your role is critical to the diagnostic process.
582
 
583
- CORE RESPONSIBILITIES:
584
- - Maintain a probability-ranked differential diagnosis with the top 3-5 most likely conditions
585
- - Update probabilities using Bayesian reasoning after each new finding
586
- - Consider both common and rare diseases appropriate to the clinical context
587
- - Explicitly track how new evidence changes your diagnostic thinking
588
- - Provide comprehensive analysis with detailed clinical reasoning
589
 
590
- APPROACH:
591
- 1. Start with the most likely diagnoses based on presenting symptoms
592
- 2. For each new piece of evidence, consider:
593
- - How it supports or refutes each hypothesis
594
- - Whether it suggests new diagnoses to consider
595
- - How it changes the relative probabilities
596
- 3. Always explain your Bayesian reasoning clearly
597
- 4. Consider epidemiology, pathophysiology, and clinical patterns
598
 
599
- **IMPORTANT: You MUST use the update_differential_diagnosis function to provide your structured analysis.**
600
-
601
- Use the function to provide:
602
- - A one-sentence summary of your primary diagnostic conclusion and confidence level
603
- - Your top 2-5 differential diagnoses with probability estimates (as decimals: 0.0-1.0)
604
- - Brief rationale for each diagnosis
605
- - Key supporting evidence for leading hypotheses
606
- - Critical contradictory evidence that must be addressed
607
-
608
- Remember: Your differential drives the entire diagnostic process. Provide clear probabilities and reasoning.
609
- """,
610
-
611
- AgentRole.TEST_CHOOSER: f"""
612
- {dynamic_context}
613
-
614
- You are Dr. Test-Chooser, a specialist in diagnostic test selection and information theory.
615
 
616
- CORE RESPONSIBILITIES:
617
- - Select up to 3 diagnostic tests per round that maximally discriminate between leading hypotheses
618
- - Optimize for information value, not just clinical reasonableness
619
- - Consider test characteristics: sensitivity, specificity, positive/negative predictive values
620
- - Balance diagnostic yield with patient burden and resource utilization
621
- - Provide comprehensive test selection rationale
622
 
623
- SELECTION CRITERIA:
624
- 1. Information Value: How much will this test change diagnostic probabilities?
625
- 2. Discriminatory Power: How well does it distinguish between competing hypotheses?
626
- 3. Clinical Impact: Will the result meaningfully alter management?
627
- 4. Sequential Logic: What should we establish first before ordering more complex tests?
628
- 5. Cost-effectiveness and patient safety considerations
629
 
630
- APPROACH:
631
- - For each proposed test, explicitly state which hypotheses it will help confirm or exclude
632
- - Consider both positive and negative results and their implications
633
- - Think about test sequences (e.g., basic labs before advanced imaging)
634
- - Avoid redundant tests that won't add new information
635
- - Consider pre-test probability and post-test probability calculations
636
 
637
- OUTPUT FORMAT (You have a response limit of {self._get_agent_max_tokens(AgentRole.TEST_CHOOSER)} tokens - prioritize actionable recommendations):
638
-
639
- **SUMMARY FIRST:** Lead with your single most recommended test and why it's the highest priority.
640
-
641
- **DETAILED RECOMMENDATIONS (up to 3 tests):**
642
- For each test:
643
- - Test name (be specific and accurate)
644
- - Primary hypotheses it will help evaluate
645
- - Expected information gain
646
- - How results will change management
647
- - Cost-effectiveness assessment
648
- - Timing rationale
649
 
650
- Focus on tests that will most efficiently narrow the differential diagnosis.
651
- """,
652
-
653
- AgentRole.CHALLENGER: f"""
654
- {dynamic_context}
655
-
656
- You are Dr. Challenger, the critical thinking specialist and devil's advocate.
657
 
658
- CORE RESPONSIBILITIES:
659
- - Identify and challenge cognitive biases in the diagnostic process
660
- - Highlight contradictory evidence that might be overlooked
661
- - Propose alternative hypotheses and falsifying tests
662
- - Guard against premature diagnostic closure
663
- - Provide comprehensive critical analysis
664
 
665
- COGNITIVE BIASES TO WATCH FOR:
666
- 1. Anchoring: Over-reliance on initial impressions
667
- 2. Confirmation bias: Seeking only supporting evidence
668
- 3. Availability bias: Overestimating probability of recently seen conditions
669
- 4. Representativeness: Ignoring base rates and prevalence
670
- 5. Search satisficing: Stopping at "good enough" explanations
671
- 6. Attribution errors and hindsight bias
672
 
673
- YOUR APPROACH:
674
- - Ask "What else could this be?" and "What doesn't fit?"
675
- - Challenge assumptions and look for alternative explanations
676
- - Propose tests that could disprove the leading hypothesis
677
- - Consider rare diseases when common ones don't fully explain the picture
678
- - Advocate for considering multiple conditions simultaneously
679
- - Look for inconsistencies in the clinical presentation
680
 
681
- OUTPUT FORMAT (You have a response limit of {self._get_agent_max_tokens(AgentRole.CHALLENGER)} tokens - focus on the most critical challenges):
682
-
683
- **SUMMARY FIRST:** State your primary concern with the current diagnostic approach in one sentence.
684
-
685
- **CRITICAL CHALLENGES:**
686
- - Most significant bias identified in current reasoning
687
- - Key evidence that contradicts leading hypotheses
688
- - Most important alternative diagnosis to consider
689
- - Essential test to falsify current assumptions
690
- - Highest priority red flag or safety concern
691
- - Most critical gap in current approach
692
-
693
- Be constructively critical - focus on the challenges that most impact diagnostic accuracy.
694
- """,
695
-
696
- AgentRole.STEWARDSHIP: f"""
697
- {dynamic_context}
698
-
699
- You are Dr. Stewardship, the resource optimization and cost-effectiveness specialist.
700
 
701
- CORE RESPONSIBILITIES:
702
- - Enforce cost-conscious, high-value care
703
- - Advocate for cheaper alternatives when diagnostically equivalent
704
- - Challenge low-yield, expensive tests
705
- - Balance diagnostic thoroughness with resource stewardship
706
- - Provide comprehensive cost-benefit analysis
707
 
708
- COST-VALUE FRAMEWORK:
709
- 1. High-Value Tests: Low cost, high diagnostic yield, changes management
710
- 2. Moderate-Value Tests: Moderate cost, specific indication, incremental value
711
- 3. Low-Value Tests: High cost, low yield, minimal impact on decisions
712
- 4. No-Value Tests: Any cost, no diagnostic value, ordered out of habit
713
 
714
- ALTERNATIVE STRATEGIES:
715
- - Could patient history/physical exam provide this information?
716
- - Is there a less expensive test with similar diagnostic value?
717
- - Can we use a staged approach (cheap test first, expensive if needed)?
718
- - Does the test result actually change management?
719
- - Are there outpatient vs. inpatient cost considerations?
720
 
721
- YOUR APPROACH:
722
- - Review all proposed tests for necessity and value
723
- - Suggest cost-effective alternatives with rationale
724
- - Question tests that don't clearly advance diagnosis
725
- - Advocate for asking questions before ordering expensive tests
726
- - Consider the cumulative cost burden and budget constraints
727
- - Analyze cost per unit of diagnostic information gained
728
 
729
- OUTPUT FORMAT (Use full token allocation for detailed analysis):
730
- - Assessment of proposed tests (high/moderate/low/no value) with detailed reasoning
731
- - Specific cost-effective alternatives with cost comparisons
732
- - Questions that might obviate need for testing
733
- - Recommended modifications to testing strategy
734
- - Cumulative cost considerations and budget impact
735
- - Value-based care recommendations
736
- - Analysis of diagnostic yield vs. cost for each proposed intervention
737
 
738
- Your goal: Maximum diagnostic accuracy at minimum necessary cost while maintaining high-quality care.
739
- """,
740
-
741
- AgentRole.CHECKLIST: f"""
742
- {dynamic_context}
743
-
744
- You are Dr. Checklist, the quality assurance and consistency specialist.
745
 
746
- CORE RESPONSIBILITIES:
747
- - Perform comprehensive quality control on all panel deliberations
748
- - Ensure test names are valid and properly specified
749
- - Check internal consistency of reasoning across panel members
750
- - Flag logical errors or contradictions in the diagnostic approach
751
- - Provide systematic quality assessment
752
 
753
- QUALITY CHECKS:
754
- 1. Test Validity: Are proposed tests real and properly named?
755
- 2. Logical Consistency: Do the recommendations align with the differential?
756
- 3. Evidence Integration: Are all findings being considered appropriately?
757
- 4. Process Adherence: Is the panel following proper diagnostic methodology?
758
- 5. Safety Checks: Are any critical possibilities being overlooked?
759
- 6. Completeness: Is the diagnostic workup comprehensive?
760
 
761
- SPECIFIC VALIDATIONS:
762
- - Test names match standard medical terminology
763
- - Proposed tests are appropriate for the clinical scenario
764
- - No contradictions between different panel members' reasoning
765
- - All significant findings are being addressed
766
- - No gaps in the diagnostic logic
767
- - Proper consideration of differential diagnosis breadth
768
-
769
- OUTPUT FORMAT (Use full token allocation for comprehensive analysis):
770
- - Detailed validation summary (✓ Clear / ⚠ Issues noted)
771
- - Any test name corrections needed with proper terminology
772
- - Logical inconsistencies identified with specific examples
773
- - Missing considerations or gaps in reasoning
774
- - Process improvement suggestions with rationale
775
- - Safety concerns or red flags that need immediate attention
776
- - Systematic review of diagnostic approach quality
777
-
778
- Keep your feedback comprehensive and detailed. Flag any issues that could compromise diagnostic quality or patient safety.
779
- """,
780
-
781
- AgentRole.CONSENSUS: f"""
782
- {dynamic_context}
783
-
784
- You are the Consensus Coordinator, responsible for synthesizing the virtual panel's expertise into a single, optimal decision.
785
-
786
- CORE RESPONSIBILITIES:
787
- - Integrate input from Dr. Hypothesis, Dr. Test-Chooser, Dr. Challenger, Dr. Stewardship, and Dr. Checklist
788
- - Decide on the single best next action: 'ask', 'test', or 'diagnose'
789
- - Balance competing priorities: accuracy, cost, efficiency, and thoroughness
790
- - Ensure the chosen action advances the diagnostic process optimally
791
-
792
- **PRIORITIZED DECISION FRAMEWORK:**
793
- Use the following prioritized framework to make your decision:
794
-
795
- 1. **Certainty Threshold:** If Dr. Hypothesis's leading diagnosis has confidence >85% AND Dr. Challenger raises no major objections, your action MUST be `diagnose`.
796
- 2. **Address Red Flags:** If Dr. Challenger identifies a critical bias or contradictory evidence, your next action MUST be a test or question that directly addresses that challenge.
797
- 3. **High-Value Information:** Otherwise, select the test from Dr. Test-Chooser that offers the highest information gain.
798
- 4. **Cost Optimization:** Before finalizing a test, check Dr. Stewardship's input. If a diagnostically equivalent but cheaper alternative is available, select it.
799
- 5. **Default to Questions:** If no test meets the criteria or the budget is a major concern, select the most pertinent question to ask.
800
-
801
- **IMPORTANT: You MUST use the make_consensus_decision function to provide your structured response. Call this function with the appropriate action_type, content, and reasoning parameters.**
802
-
803
- For action_type "ask": content should be specific patient history or physical exam questions
804
- For action_type "test": content should be properly named diagnostic tests (up to 3)
805
- For action_type "diagnose": content should be the complete, specific final diagnosis
806
-
807
- Make the decision that best advances accurate, cost-effective diagnosis. Use comprehensive reasoning that synthesizes all panel input and cites the specific decision framework step you're following.
808
- """,
809
-
810
- AgentRole.GATEKEEPER: f"""
811
- {dynamic_context}
812
-
813
- You are the Gatekeeper, the clinical information oracle with complete access to the patient case file.
814
-
815
- CORE RESPONSIBILITIES:
816
- - Provide objective, specific clinical findings when explicitly requested
817
- - Serve as the authoritative source for all patient information
818
- - Generate realistic synthetic findings for tests not in the original case
819
- - Maintain clinical realism while preventing information leakage
820
- - Provide comprehensive, detailed responses
821
-
822
- RESPONSE PRINCIPLES:
823
- 1. OBJECTIVITY: Provide only factual findings, never interpretations or impressions
824
- 2. SPECIFICITY: Give precise, detailed results when tests are properly ordered
825
- 3. REALISM: Ensure all responses reflect realistic clinical scenarios
826
- 4. NO HINTS: Never provide diagnostic clues or suggestions
827
- 5. CONSISTENCY: Maintain coherence across all provided information
828
- 6. COMPLETENESS: Provide thorough, detailed responses
829
-
830
- HANDLING REQUESTS:
831
- - Patient History Questions: Provide relevant history from case file or realistic details
832
- - Physical Exam: Give specific examination findings as would be documented
833
- - Diagnostic Tests: Provide exact results as specified or realistic synthetic values
834
- - Vague Requests: Politely ask for more specific queries
835
- - Invalid Requests: Explain why the request cannot be fulfilled
836
-
837
- SYNTHETIC FINDINGS GUIDELINES:
838
- When generating findings not in the original case:
839
- - Ensure consistency with established diagnosis and case details
840
- - Use realistic reference ranges and values
841
- - Maintain clinical plausibility
842
- - Avoid pathognomonic findings unless specifically diagnostic
843
- - Consider normal variations and expected findings
844
-
845
- RESPONSE FORMAT (Use full token allocation for detailed responses):
846
- - Direct, clinical language with comprehensive detail
847
- - Specific measurements with reference ranges when applicable
848
- - Clear organization of findings with systematic presentation
849
- - Professional medical terminology with full descriptions
850
- - Complete documentation as would appear in medical records
851
 
852
- Your role is crucial: provide complete, accurate clinical information while maintaining the challenge of the diagnostic process. Use your full token allocation to provide comprehensive, detailed clinical information.
853
- """,
854
-
855
- AgentRole.JUDGE: f"""
856
- {dynamic_context}
857
-
858
- You are the Judge, the diagnostic accuracy evaluation specialist.
859
-
860
- CORE RESPONSIBILITIES:
861
- - Evaluate candidate diagnoses against ground truth using a rigorous clinical rubric
862
- - Provide fair, consistent scoring based on clinical management implications
863
- - Consider diagnostic substance over terminology differences
864
- - Account for acceptable medical synonyms and equivalent formulations
865
- - Provide comprehensive evaluation reasoning
866
-
867
- EVALUATION RUBRIC (5-point Likert scale):
868
-
869
- SCORE 5 (Perfect/Clinically Superior):
870
- - Clinically identical to reference diagnosis
871
- - May be more specific than reference (adding relevant detail)
872
- - No incorrect or unrelated additions
873
- - Treatment approach would be identical
874
-
875
- SCORE 4 (Mostly Correct - Minor Incompleteness):
876
- - Core disease correctly identified
877
- - Minor qualifier or component missing/mis-specified
878
- - Overall management largely unchanged
879
- - Clinically appropriate diagnosis
880
-
881
- SCORE 3 (Partially Correct - Major Error):
882
- - Correct general disease category
883
- - Major error in etiology, anatomic site, or critical specificity
884
- - Would significantly alter workup or prognosis
885
- - Partially correct but clinically concerning gaps
886
-
887
- SCORE 2 (Largely Incorrect):
888
- - Shares only superficial features with correct diagnosis
889
- - Wrong fundamental disease process
890
- - Would misdirect clinical workup
891
- - Partially contradicts case details
892
-
893
- SCORE 1 (Completely Incorrect):
894
- - No meaningful overlap with correct diagnosis
895
- - Wrong organ system or disease category
896
- - Would likely lead to harmful care
897
- - Completely inconsistent with clinical presentation
898
-
899
- EVALUATION PROCESS:
900
- 1. Compare core disease entity
901
- 2. Assess etiology/causative factors
902
- 3. Evaluate anatomic specificity
903
- 4. Consider diagnostic completeness
904
- 5. Judge clinical management implications
905
-
906
- OUTPUT FORMAT (Use full token allocation for comprehensive evaluation):
907
- - Score (1-5) with clear label and detailed justification
908
- - Comprehensive reasoning referencing specific rubric criteria
909
- - Detailed explanation of how diagnosis would affect clinical management
910
- - Note any acceptable medical synonyms or equivalent terminology
911
- - Analysis of diagnostic accuracy and clinical implications
912
- - Systematic comparison with ground truth diagnosis
913
 
914
- Maintain high standards while recognizing legitimate diagnostic variability in medical practice. Provide comprehensive, detailed evaluation.
915
- """,
916
  }
917
 
918
  # Use existing prompts for other roles, just add dynamic context
@@ -2648,13 +2372,13 @@ def run_mai_dxo_demo(
2648
  variant,
2649
  budget=3000,
2650
  model_name="gemini/gemini-2.5-flash", # Fixed: Use valid model name
2651
- max_iterations=5,
2652
  )
2653
  else:
2654
  orchestrator = MaiDxOrchestrator.create_variant(
2655
  variant,
2656
  model_name="gemini/gemini-2.5-flash", # Fixed: Use valid model name
2657
- max_iterations=5,
2658
  )
2659
 
2660
  result = orchestrator.run(
@@ -2730,13 +2454,13 @@ def run_mai_dxo_demo(
2730
  # variant_name,
2731
  # budget=3000,
2732
  # model_name="gpt-4.1", # Fixed: Use valid model name
2733
- # max_iterations=5,
2734
  # )
2735
  # else:
2736
  # orchestrator = MaiDxOrchestrator.create_variant(
2737
  # variant_name,
2738
  # model_name="gpt-4.1", # Fixed: Use valid model name
2739
- # max_iterations=5,
2740
  # )
2741
 
2742
  # # Run the diagnostic process
 
574
  if case_state:
575
  dynamic_context = self._get_dynamic_context(role, case_state)
576
 
577
+ # --- Compact, token-efficient prompts ---
578
  base_prompts = {
579
+ AgentRole.HYPOTHESIS: f"""{dynamic_context}
 
 
 
580
 
581
+ MANDATE: Keep an up-to-date, probability-ranked differential.
 
 
 
 
 
582
 
583
+ DIRECTIVES:
584
+ 1. Return 2-5 diagnoses (prob 0-1) with 1-line rationale.
585
+ 2. List key supporting & contradictory evidence.
 
 
 
 
 
586
 
587
+ You MUST call update_differential_diagnosis().""",
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
588
 
589
+ AgentRole.TEST_CHOOSER: f"""{dynamic_context}
 
 
 
 
 
590
 
591
+ MANDATE: Pick the highest-yield tests.
 
 
 
 
 
592
 
593
+ DIRECTIVES:
594
+ 1. Suggest ≤3 tests that best separate current diagnoses.
595
+ 2. Note target hypothesis & info-gain vs cost.
 
 
 
596
 
597
+ Limit: focus on top 1-2 critical points.""",
 
 
 
 
 
 
 
 
 
 
 
598
 
599
+ AgentRole.CHALLENGER: f"""{dynamic_context}
 
 
 
 
 
 
600
 
601
+ MANDATE: Expose the biggest flaw or bias.
 
 
 
 
 
602
 
603
+ DIRECTIVES:
604
+ 1. Name the key bias/contradiction.
605
+ 2. Propose an alternate diagnosis or falsifying test.
 
 
 
 
606
 
607
+ Reply concisely (top 2 issues).""",
 
 
 
 
 
 
608
 
609
+ AgentRole.STEWARDSHIP: f"""{dynamic_context}
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
610
 
611
+ MANDATE: Ensure cost-effective care.
 
 
 
 
 
612
 
613
+ DIRECTIVES:
614
+ 1. Rate proposed tests (High/Mod/Low value).
615
+ 2. Suggest cheaper equivalents where possible.
 
 
616
 
617
+ Be brief; highlight savings.""",
 
 
 
 
 
618
 
619
+ AgentRole.CHECKLIST: f"""{dynamic_context}
 
 
 
 
 
 
620
 
621
+ MANDATE: Guarantee quality & consistency.
 
 
 
 
 
 
 
622
 
623
+ DIRECTIVES:
624
+ 1. Flag invalid tests or logic gaps.
625
+ 2. Note safety concerns.
 
 
 
 
626
 
627
+ Return bullet list of critical items.""",
 
 
 
 
 
628
 
629
+ AgentRole.CONSENSUS: f"""{dynamic_context}
 
 
 
 
 
 
630
 
631
+ MANDATE: Decide the next action.
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
632
 
633
+ DECISION RULES:
634
+ 1. If confidence >85% & no major objection → diagnose.
635
+ 2. Else address Challenger's top concern.
636
+ 3. Else order highest info-gain (cheapest) test.
637
+ 4. Else ask the most informative question.
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
638
 
639
+ You MUST call make_consensus_decision().""",
 
640
  }
641
 
642
  # Use existing prompts for other roles, just add dynamic context
 
2372
  variant,
2373
  budget=3000,
2374
  model_name="gemini/gemini-2.5-flash", # Fixed: Use valid model name
2375
+ max_iterations=3,
2376
  )
2377
  else:
2378
  orchestrator = MaiDxOrchestrator.create_variant(
2379
  variant,
2380
  model_name="gemini/gemini-2.5-flash", # Fixed: Use valid model name
2381
+ max_iterations=3,
2382
  )
2383
 
2384
  result = orchestrator.run(
 
2454
  # variant_name,
2455
  # budget=3000,
2456
  # model_name="gpt-4.1", # Fixed: Use valid model name
2457
+ # max_iterations=3,
2458
  # )
2459
  # else:
2460
  # orchestrator = MaiDxOrchestrator.create_variant(
2461
  # variant_name,
2462
  # model_name="gpt-4.1", # Fixed: Use valid model name
2463
+ # max_iterations=3,
2464
  # )
2465
 
2466
  # # Run the diagnostic process