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0dd651d
1
Parent(s):
b796c18
Update code/add_structure.py
Browse files- code/add_structure.py +0 -9
code/add_structure.py
CHANGED
@@ -284,22 +284,13 @@ def match3D(data):
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def domainDistanceModels(domStart, domEnd, coordinates, mutationPosition):
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resList = list(range(domStart, domEnd))
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st.write('resList')
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st.write(resList)
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domainDistanceList = []
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for i in resList:
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st.write('i', i)
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st.write(ast.literal_eval(matchList)[str(i)])
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st.write(coordinates[str(posOnPDB)])
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st.write(coordinates[str(domainPos)])
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st.write(find_distance(coordMut, coordDomain))
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try:
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coordMut = (coordinates)[mutationPosition]
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coordDomain = (coordinates)[i]
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distance = find_distance(coordMut, coordDomain)
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domainDistanceList.append(distance)
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st.write('domainDistanceList')
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st.write(domainDistanceList)
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return min(domainDistanceList)
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except KeyError:
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domainDistanceList = np.NaN
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def domainDistanceModels(domStart, domEnd, coordinates, mutationPosition):
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resList = list(range(domStart, domEnd))
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domainDistanceList = []
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for i in resList:
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try:
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coordMut = (coordinates)[mutationPosition]
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coordDomain = (coordinates)[i]
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distance = find_distance(coordMut, coordDomain)
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domainDistanceList.append(distance)
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return min(domainDistanceList)
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except KeyError:
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domainDistanceList = np.NaN
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