fatmacankara commited on
Commit
0dd651d
·
1 Parent(s): b796c18

Update code/add_structure.py

Browse files
Files changed (1) hide show
  1. code/add_structure.py +0 -9
code/add_structure.py CHANGED
@@ -284,22 +284,13 @@ def match3D(data):
284
 
285
  def domainDistanceModels(domStart, domEnd, coordinates, mutationPosition):
286
  resList = list(range(domStart, domEnd))
287
- st.write('resList')
288
- st.write(resList)
289
  domainDistanceList = []
290
  for i in resList:
291
- st.write('i', i)
292
- st.write(ast.literal_eval(matchList)[str(i)])
293
- st.write(coordinates[str(posOnPDB)])
294
- st.write(coordinates[str(domainPos)])
295
- st.write(find_distance(coordMut, coordDomain))
296
  try:
297
  coordMut = (coordinates)[mutationPosition]
298
  coordDomain = (coordinates)[i]
299
  distance = find_distance(coordMut, coordDomain)
300
  domainDistanceList.append(distance)
301
- st.write('domainDistanceList')
302
- st.write(domainDistanceList)
303
  return min(domainDistanceList)
304
  except KeyError:
305
  domainDistanceList = np.NaN
 
284
 
285
  def domainDistanceModels(domStart, domEnd, coordinates, mutationPosition):
286
  resList = list(range(domStart, domEnd))
 
 
287
  domainDistanceList = []
288
  for i in resList:
 
 
 
 
 
289
  try:
290
  coordMut = (coordinates)[mutationPosition]
291
  coordDomain = (coordinates)[i]
292
  distance = find_distance(coordMut, coordDomain)
293
  domainDistanceList.append(distance)
 
 
294
  return min(domainDistanceList)
295
  except KeyError:
296
  domainDistanceList = np.NaN