Update code/add_3Dalignment.py

code/add_3Dalignment.py

@@ -275,10 +275,13 @@ def get_alignments_3D(identifier, model_num, pdb_path, pdbSequence, source, chai
 
         return alignments, coords, resnums_for_sasa
     elif mode==2:
+            st.write('Hello I am in 3Dalignment')
+
             atomSequence = ''
             coords = []
             resnums_for_sasa = []
             if file_format == 'txt':
+                st.write('Hello I am in 3Dalignment TXT')
                 with open(name, encoding="utf8") as f:
                     for line in f.readlines():
                         if line[0:4].strip() == 'ATOM' and line[13:15].strip() == 'CA':
@@ -290,6 +293,7 @@ def get_alignments_3D(identifier, model_num, pdb_path, pdbSequence, source, chai
                             coords.append([line[31:38].strip(), line[39:46].strip(), line[47:54].strip()])
                             resnums_for_sasa.append(line[22:26].strip())
             elif file_format == 'gzip':
+                st.write('Hello I am in 3Dalignment GZIP')
                 with gzip.open(pdb_path, mode='rb') as f:
                     for line in f:
                         line = line.decode()