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Update app.py
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app.py
CHANGED
@@ -239,28 +239,28 @@ if app_choice == "🔁 Protein Repeat Finder":
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result_df = pd.DataFrame(rows)
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st.dataframe(result_df)
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if st.checkbox("Repeat Cluster Visualization"):
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result_df = pd.DataFrame(rows)
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st.dataframe(result_df)
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# if st.checkbox("Repeat Cluster Visualization"):
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# repeat_counts = defaultdict(int)
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# for seq_data in st.session_state.all_sequences_data:
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# for _, _, freq_dict in seq_data:
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# for repeat, count in freq_dict.items():
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# repeat_counts[repeat] += count
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# if repeat_counts:
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# sorted_repeats = sorted(repeat_counts.items(), key=lambda x: x[1], reverse=True)
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# top_n = st.slider("Select number of top repeats to visualize", min_value=5, max_value=50, value=20)
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# top_repeats = sorted_repeats[:top_n]
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# repeats, counts = zip(*top_repeats)
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# plt.figure(figsize=(12, 6))
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# sns.barplot(x=list(repeats), y=list(counts), palette="viridis")
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# plt.xticks(rotation=45, ha='right')
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# plt.xlabel("Repeats")
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# plt.ylabel("Total Frequency")
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# plt.title("Top Repeat Clusters Across All Sequences")
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# st.pyplot(plt.gcf())
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# else:
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# st.warning("No repeat data available to visualize. Please upload files first.")
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