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4885a49
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1 Parent(s): ac2f915

Upload app.py

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  1. app.py +2 -1
app.py CHANGED
@@ -14,6 +14,7 @@ import torch.nn as nn
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  import torchvision.models as models
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  import torchvision.transforms as transforms
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  from sklearn.metrics.pairwise import cosine_similarity
 
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  import cv2
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  def square_padd(original_data, square_size=(120,152, 184), order = 1):
@@ -534,7 +535,7 @@ with gr.Blocks() as demo:
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  with gr.Column(scale=1):
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  gr.Markdown("### Step 4: Visualizing Allen Brain Cell Types Atlas")
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  gallery = gr.Gallery(label="ABC Atlas", value = gallery_images,columns = 5, height = 450)
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- gr.Markdown("### Step 5: Run cell type mappinp and/or registeration. ")
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  with gr.Row():
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  run_button = gr.Button("Map My Sections")
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  reg_button = gr.Button("Run Registration (Optional)", visible=False)
 
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  import torchvision.models as models
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  import torchvision.transforms as transforms
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  from sklearn.metrics.pairwise import cosine_similarity
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+ from skimage.transform import resize
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  import cv2
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  def square_padd(original_data, square_size=(120,152, 184), order = 1):
 
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  with gr.Column(scale=1):
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  gr.Markdown("### Step 4: Visualizing Allen Brain Cell Types Atlas")
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  gallery = gr.Gallery(label="ABC Atlas", value = gallery_images,columns = 5, height = 450)
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+ gr.Markdown("### Step 5: Run cell type mapping and/or registeration. ")
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  with gr.Row():
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  run_button = gr.Button("Map My Sections")
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  reg_button = gr.Button("Run Registration (Optional)", visible=False)