import subprocess as sp from .logger import get_logger LOGGER = get_logger() def run_model(fixed_path=None, moving_path=None, fixed_seg_path=None, moving_seg_path=None, output_path=None, task="B"): if (fixed_seg_path is None) or (moving_seg_path is None): LOGGER.info("The fixed or moving segmentation were not provided and are thus ignored for inference.") sp.check_call(["ddmr", "-f", fixed_path, "-m", moving_path, \ "-o", output_path, "-a", task, "--model", "BL-NS", "--original-resolution"]) else: LOGGER.info("All four inputs were successfully provided.") sp.check_call(["ddmr", "-f", fixed_path, "-m", moving_path, "-fs", fixed_seg_path, "-ms", moving_seg_path, "-o", output_path, "-a", task, "--model", "BL-NS", "--original-resolution"])