andreped commited on
Commit
fdff60e
·
unverified ·
1 Parent(s): e34f28b

Python 3.6 support + versioned scikit-image (#19)

Browse files
.github/workflows/build.yml CHANGED
@@ -14,10 +14,10 @@ jobs:
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  runs-on: ubuntu-20.04
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  steps:
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  - uses: actions/checkout@v1
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- - name: Set up Python 3.7
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  uses: actions/setup-python@v2
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  with:
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- python-version: 3.7
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  - name: Install dependencies
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  run: |
@@ -40,7 +40,7 @@ jobs:
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  strategy:
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  matrix:
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  os: [windows-2019, ubuntu-20.04, macos-10.15]
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- python-version: ["3.7", "3.8", "3.9", "3.10"]
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  steps:
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  - uses: actions/checkout@v1
@@ -55,7 +55,7 @@ jobs:
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  name: "Python wheel"
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  - name: Install software
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- run: pip install --find-links=${{github.workspace}} lungtumormask
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  - name: Download test data
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  run: |
 
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  runs-on: ubuntu-20.04
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  steps:
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  - uses: actions/checkout@v1
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+ - name: Set up Python 3.6
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  uses: actions/setup-python@v2
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  with:
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+ python-version: 3.6
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  - name: Install dependencies
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  run: |
 
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  strategy:
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  matrix:
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  os: [windows-2019, ubuntu-20.04, macos-10.15]
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+ python-version: ["3.6", "3.7", "3.8", "3.9", "3.10"]
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  steps:
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  - uses: actions/checkout@v1
 
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  name: "Python wheel"
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  - name: Install software
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+ run: pip install -U --find-links=${{github.workspace}} lungtumormask
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  - name: Download test data
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  run: |
.github/workflows/release.yml CHANGED
@@ -14,10 +14,10 @@ jobs:
14
  runs-on: ubuntu-20.04
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  steps:
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  - uses: actions/checkout@v1
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- - name: Set up Python 3.7
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  uses: actions/setup-python@v2
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  with:
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- python-version: 3.7
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  - name: Install dependencies
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  run: |
 
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  runs-on: ubuntu-20.04
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  steps:
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  - uses: actions/checkout@v1
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+ - name: Set up Python 3.6
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  uses: actions/setup-python@v2
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  with:
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+ python-version: 3.6
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  - name: Install dependencies
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  run: |
README.md CHANGED
@@ -16,11 +16,11 @@ A pretrained model is made available in a command line tool and can be used as y
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  ## [Installation](https://github.com/VemundFredriksen/LungTumorMask#installation)
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- Software has been tested against Python `3.7-3.10`.
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  Stable latest release:
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  ```
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- pip install https://github.com/VemundFredriksen/LungTumorMask/releases/download/v1.2.1/lungtumormask-1.2.1-py2.py3-none-any.whl
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  ```
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  Or from source:
 
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  ## [Installation](https://github.com/VemundFredriksen/LungTumorMask#installation)
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+ Software has been tested against Python `3.6-3.10`.
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  Stable latest release:
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  ```
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+ pip install https://github.com/VemundFredriksen/LungTumorMask/releases/download/v1.2.2/lungtumormask-1.2.2-py2.py3-none-any.whl
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  ```
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  Or from source:
setup.py CHANGED
@@ -3,16 +3,17 @@ from setuptools import setup, find_packages
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  setup(
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  name="lungtumormask",
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  packages=find_packages(),
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- version='1.2.1',
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  author="Svein Ole M Sevle, Vemund Fredriksen, and André Pedersen",
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  url="https://github.com/VemundFredriksen/LungTumorMask",
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  license="MIT",
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- python_requires='>=3.7',
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  install_requires=[
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  'numpy<=1.23.2',
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  'monai<=0.8.1',
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  'lungmask@git+https://github.com/andreped/lungmask',
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  'nibabel',
 
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  'torch>=1.10.2,<=1.11',
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  ],
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  entry_points={
@@ -21,6 +22,7 @@ setup(
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  ]
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  },
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  classifiers=[
 
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  "Programming Language :: Python :: 3.7",
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  "Programming Language :: Python :: 3.8",
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  "Programming Language :: Python :: 3.9",
 
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  setup(
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  name="lungtumormask",
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  packages=find_packages(),
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+ version='1.2.2',
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  author="Svein Ole M Sevle, Vemund Fredriksen, and André Pedersen",
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  url="https://github.com/VemundFredriksen/LungTumorMask",
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  license="MIT",
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+ python_requires='>=3.6',
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  install_requires=[
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  'numpy<=1.23.2',
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  'monai<=0.8.1',
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  'lungmask@git+https://github.com/andreped/lungmask',
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  'nibabel',
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+ 'scikit-image>=0.17.0',
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  'torch>=1.10.2,<=1.11',
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  ],
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  entry_points={
 
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  ]
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  },
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  classifiers=[
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+ "Programming Language :: Python :: 3.6",
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  "Programming Language :: Python :: 3.7",
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  "Programming Language :: Python :: 3.8",
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  "Programming Language :: Python :: 3.9",