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Create app.py
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import os
import pandas as pd
import gradio as gr
def MatchLOINC(name):
import pandas as pd
basedir = os.path.dirname(__file__)
data = pd.read_csv(f'{basedir}/LoincTableCore.csv') # LOINC Download https://loinc.org/downloads/
swith = data[data['COMPONENT'].str.match(name)]
return switch
def MatchSNOMED(name):
import pandas as pd
basedir = os.path.dirname(__file__)
data = pd.read_csv(f'{basedir}/sct2_Description_Full-en_US1000124_20220901.txt',sep='\t') # SNOMEDCT Download https://www.nlm.nih.gov/healthit/snomedct/us_edition.html
swith = data[data['term'].str.match(name)]
return swith
# ECQM for Value Set Measures and Quality Reporting: https://vsac.nlm.nih.gov/download/ecqm?rel=20220505&res=eh_only.unique_vs.20220505.txt
# SNOMED Nurse Subset https://www.nlm.nih.gov/healthit/snomedct/index.html?_gl=1*36x5pi*_ga*MTI0ODMyNjkxOS4xNjY1NTY3Mjcz*_ga_P1FPTH9PL4*MTY2Nzk4OTI1My41LjEuMTY2Nzk4OTY5Ni4wLjAuMA..
with gr.Blocks() as demo:
name = gr.Textbox(label="Name")
output1 = gr.Textbox(label="Output Match LOINC")
output2 = gr.Textbox(label="Output Match SNOMED")
button1 = gr.Button("Match LOINC Clinical Terminology")
button1.click(fn=MatchLOINC, inputs=name, outputs=output1)
button2 = gr.Button("Match SNOMED Clinical Terminology")
button2.click(fn=MatchSNOMED, inputs=name, outputs=output2)
demo.launch(debug=True)