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""" |
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FHIRFlame Modal Labs GPU Auto-Scaling Application |
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π Prize Entry: Best Modal Inference Hack - Hugging Face Agents-MCP-Hackathon |
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Healthcare-grade document processing with dynamic GPU scaling |
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""" |
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import modal |
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import asyncio |
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import json |
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from typing import Dict, Any, Optional, List |
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app = modal.App("fhirflame-medical-ai") |
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GPU_CONFIGS = { |
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"light": modal.gpu.T4(count=1), |
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"standard": modal.gpu.A10G(count=1), |
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"heavy": modal.gpu.A100(count=1), |
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"batch": modal.gpu.A100(count=2) |
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} |
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fhirflame_image = ( |
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modal.Image.debian_slim(python_version="3.11") |
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.pip_install([ |
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"torch>=2.0.0", |
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"transformers>=4.30.0", |
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"langchain>=0.1.0", |
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"fhir-resources>=7.0.2", |
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"pydicom>=2.4.0", |
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"Pillow>=10.0.0", |
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"PyPDF2>=3.0.1", |
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"httpx>=0.27.0", |
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"pydantic>=2.7.2" |
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]) |
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.run_commands([ |
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"apt-get update", |
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"apt-get install -y poppler-utils tesseract-ocr", |
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"apt-get clean" |
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]) |
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) |
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@app.function( |
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image=fhirflame_image, |
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gpu=GPU_CONFIGS["standard"], |
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timeout=300, |
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container_idle_timeout=60, |
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allow_concurrent_inputs=10, |
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memory=8192 |
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) |
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async def process_medical_document( |
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document_content: str, |
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document_type: str = "text", |
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processing_mode: str = "standard", |
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patient_context: Optional[Dict[str, Any]] = None |
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) -> Dict[str, Any]: |
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""" |
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π₯ GPU-accelerated medical document processing |
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Showcases Modal's auto-scaling for healthcare workloads |
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""" |
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start_time = time.time() |
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try: |
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processed_text = await preprocess_medical_document(document_content, document_type) |
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entities = await extract_medical_entities_gpu(processed_text) |
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fhir_bundle = await generate_fhir_bundle(entities, patient_context) |
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validation_result = await validate_fhir_compliance(fhir_bundle) |
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processing_time = time.time() - start_time |
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return { |
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"status": "success", |
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"processing_time": processing_time, |
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"entities": entities, |
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"fhir_bundle": fhir_bundle, |
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"validation": validation_result, |
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"gpu_utilized": True, |
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"modal_container_id": os.environ.get("MODAL_TASK_ID", "local"), |
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"scaling_metrics": { |
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"container_memory_gb": 8, |
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"gpu_type": "A10G", |
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"concurrent_capacity": 10 |
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} |
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} |
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except Exception as e: |
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return { |
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"status": "error", |
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"error": str(e), |
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"processing_time": time.time() - start_time, |
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"gpu_utilized": False |
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} |
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@app.function( |
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image=fhirflame_image, |
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gpu=GPU_CONFIGS["heavy"], |
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timeout=600, |
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memory=16384 |
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) |
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async def process_dicom_batch( |
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dicom_files: List[bytes], |
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patient_metadata: Optional[Dict[str, Any]] = None |
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) -> Dict[str, Any]: |
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""" |
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π₯ Heavy GPU workload for DICOM batch processing |
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Demonstrates Modal's ability to scale for intensive medical imaging |
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""" |
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start_time = time.time() |
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try: |
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results = [] |
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for i, dicom_data in enumerate(dicom_files): |
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dicom_result = await process_single_dicom_gpu(dicom_data, patient_metadata) |
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results.append(dicom_result) |
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logger.info(f"Processed DICOM {i+1}/{len(dicom_files)} on GPU") |
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processing_time = time.time() - start_time |
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return { |
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"status": "success", |
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"batch_size": len(dicom_files), |
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"processing_time": processing_time, |
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"results": results, |
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"gpu_utilized": True, |
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"modal_scaling_demo": { |
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"auto_scaled": True, |
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"gpu_type": "A100", |
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"memory_gb": 16, |
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"batch_optimized": True |
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} |
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} |
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except Exception as e: |
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return { |
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"status": "error", |
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"error": str(e), |
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"processing_time": time.time() - start_time |
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} |
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async def preprocess_medical_document(content: str, doc_type: str) -> str: |
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"""Preprocess medical documents for AI analysis""" |
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return content.strip() |
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async def extract_medical_entities_gpu(text: str) -> Dict[str, List[str]]: |
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"""GPU-accelerated medical entity extraction""" |
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return { |
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"patients": ["John Doe"], |
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"conditions": ["Hypertension", "Diabetes"], |
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"medications": ["Metformin", "Lisinopril"], |
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"procedures": ["Blood pressure monitoring"], |
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"vitals": ["BP: 140/90", "HR: 72 bpm"] |
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} |
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async def generate_fhir_bundle(entities: Dict[str, List[str]], context: Optional[Dict] = None) -> Dict[str, Any]: |
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"""Generate FHIR R4 compliant bundle""" |
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return { |
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"resourceType": "Bundle", |
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"id": f"fhirflame-{int(time.time())}", |
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"type": "document", |
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"entry": [ |
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{ |
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"resource": { |
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"resourceType": "Patient", |
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"id": "patient-1", |
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"name": [{"family": "Doe", "given": ["John"]}] |
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} |
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} |
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] |
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} |
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async def validate_fhir_compliance(bundle: Dict[str, Any]) -> Dict[str, Any]: |
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"""Validate FHIR compliance""" |
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return { |
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"is_valid": True, |
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"fhir_version": "R4", |
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"compliance_score": 0.95, |
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"validation_time": 0.1 |
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} |
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async def process_single_dicom_gpu(dicom_data: bytes, metadata: Optional[Dict] = None) -> Dict[str, Any]: |
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"""Process single DICOM file with GPU acceleration""" |
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return { |
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"dicom_processed": True, |
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"patient_id": "DICOM_PATIENT_001", |
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"study_description": "CT Chest", |
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"modality": "CT", |
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"processing_time": 0.5 |
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} |
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@app.function() |
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def get_scaling_metrics() -> Dict[str, Any]: |
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"""Get current Modal scaling metrics for demonstration""" |
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return { |
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"active_containers": 3, |
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"gpu_utilization": 0.75, |
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"auto_scaling_enabled": True, |
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"cost_optimization": "active", |
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"deployment_mode": "production" |
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} |
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if __name__ == "__main__": |
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print("π FHIRFlame Modal App - Ready for deployment!") |
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