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#!/bin/bash
#SBATCH --partition=standard # Specify the partition
#SBATCH --account=t3 # Specify the account
#SBATCH --mem=30000 # Request 60GB of memory
#SBATCH --time=06:00:00 # Set the time limit to 1 hour
#SBATCH --job-name=preprocess_svj_dataset # Name the job
#SBATCH --output=jobs/preprocess_v3_Delphes_output.log # Redirect stdout to a log file
#SBATCH --error=jobs/preprocess_v3_Delphes_error.log # Redirect stderr to a log file
#SBATCH --mail-type=END,FAIL
#SBATCH [email protected]
# Load the Singularity environment
source env.sh
export APPTAINER_TMPDIR=/work/gkrzmanc/singularity_tmp
export APPTAINER_CACHEDIR=/work/gkrzmanc/singularity_cache
# Run the Python script
singularity exec -B /t3home/gkrzmanc/ -B /work/gkrzmanc/ -B /pnfs/psi.ch/cms/trivcat/store/user/gkrzmanc --nv docker://gkrz/lgatr:v3 python -m src.preprocessing.preprocess_dataset --input QCDtrain --output QCDtrain --v2 --overwrite --delphes
# Run the job: sbatch jobs/preprocess_v3_Delphes_QCDtrain.slurm
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