#!/bin/bash #SBATCH --partition=standard # Specify the partition #SBATCH --account=t3 # Specify the account #SBATCH --mem=50000 # Request 10GB of memory #SBATCH --time=10:00:00 # Set the time limit to 1 hour #SBATCH --job-name=preprocess_svj_dataset # Name the job #SBATCH --output=jobs/preprocess_v0_output.log # Redirect stdout to a log file #SBATCH --error=jobs/preprocess_v0_error.log # Redirect stderr to a log file # Load the Singularity environment source env.sh export APPTAINER_TMPDIR=/work/gkrzmanc/singularity_tmp export APPTAINER_CACHEDIR=/work/gkrzmanc/singularity_cache #singularity shell -B /t3home/gkrzmanc/ -B /work/gkrzmanc/ --nv docker://dologarcia/gatr:v0 # Run the Python script #python -m src.preprocessing.preprocess_dataset --input SVJ_std_UL2018_scouting_test_large --output SVJ_std_UL2018_scouting_test_large singularity exec -B /t3home/gkrzmanc/ -B /work/gkrzmanc/ --nv docker://dologarcia/gatr:v0 python -m src.preprocessing.preprocess_dataset --input scouting_PFNano_signals/SVJ_hadronic_std3 --output scouting_PFNano_signals2/SVJ_hadronic_std3 # Run the job: sbatch jobs/preprocess_v0.slurm