SMI-TED-demo1 / app.py
Enzo Reis de Oliveira
fixing path error
2af5b7d
raw
history blame
1.42 kB
import os
import sys
# 1) Ajusta o path para o inference do SMI-TED **antes** de importar anything
BASE_DIR = os.path.dirname(__file__)
INFERENCE_DIR = os.path.join(BASE_DIR, "smi-ted", "inference")
sys.path.append(INFERENCE_DIR)
# Agora o python já sabe onde achar smi_ted_light
import tempfile
import pandas as pd
import gradio as gr
from smi_ted_light.load import load_smi_ted
# 2) Caminho onde estão pesos e vocabulário
MODEL_DIR = os.path.join("smi-ted", "inference", "smi_ted_light")
model = load_smi_ted(
folder=MODEL_DIR,
ckpt_filename="smi-ted-Light_40.pt",
vocab_filename="bert_vocab_curated.txt",
)
def gerar_embedding(smiles: str):
smiles = smiles.strip()
if not smiles:
return {"erro": "digite uma sequência SMILES primeiro"}, None
try:
vetor = model.encode(smiles, return_torch=True)[0]
emb = vetor.tolist()
df = pd.DataFrame([emb])
tmp = tempfile.NamedTemporaryFile(delete=False, suffix=".csv", prefix="emb_")
df.to_csv(tmp.name, index=False)
tmp.close()
return emb, tmp.name
except Exception as e:
return {"erro": str(e)}, None
demo = gr.Interface(
fn=gerar_embedding,
inputs=gr.Textbox(label="SMILES", placeholder="Ex.: CCO"),
outputs=[gr.JSON(), gr.File(label="Baixar CSV")],
title="SMI-TED Embedding Generator",
)
if __name__ == "__main__":
demo.launch(show_api=False)