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Delete configs/preset/bacpi.yaml with huggingface_hub

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  1. configs/preset/bacpi.yaml +0 -37
configs/preset/bacpi.yaml DELETED
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- # @package _global_
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- model:
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- predictor:
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- _target_: deepscreen.models.predictors.bacpi.BACPI
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-
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- n_atom: 20480
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- n_amino: 8448
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- comp_dim: 80
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- prot_dim: 80
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- latent_dim: 80
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- gat_dim: 50
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- num_head: 3
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- dropout: 0.1
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- alpha: 0.1
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- window: 5
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- layer_cnn: 3
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- optimizer:
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- lr: 5e-4
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-
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- data:
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- batch_size: 16
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-
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- collator:
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- automatic_padding: True
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-
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- drug_featurizer:
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- _target_: deepscreen.models.predictors.bacpi.drug_featurizer
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- _partial_: true
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- radius: 2
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-
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- protein_featurizer:
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- _target_: deepscreen.models.predictors.bacpi.split_sequence
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- _partial_: true
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- ngram: 3
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- # collator:
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- # _target_: deepscreen.models.predictors.transformer_cpi_2.pack
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- # _partial_: true