minimal working
Browse files- .gitignore +1 -0
- Dockerfile +34 -0
- README.md +4 -6
- main.py +137 -0
- pup +238 -0
- sql.py +35 -0
.gitignore
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__pycache__
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Dockerfile
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FROM debian:latest AS base
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RUN apt-get update \
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&& apt-get install -y curl \
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&& apt-get clean
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# Create user
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RUN useradd -m -u 1000 user
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USER user
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ENV HOME=/home/user \
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PATH=/home/user/.local/bin:/home/user/.pixi/bin:$PATH \
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PUP=/home/user/pup
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WORKDIR $HOME
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CMD ["bash"]
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#### Puppy ####
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FROM base AS puppy
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COPY --chown=user pup .
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RUN $PUP
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RUN pup py3.11
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RUN pup fetch appenv duckdb gradio itables
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COPY --chown=user *.py .
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EXPOSE 7860
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CMD ["appenv/.venv/bin/uvicorn", "main:app", "--host", "0.0.0.0", "--port", "7860"]
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# CMD ["pup", "play"]
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README.md
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@@ -1,10 +1,8 @@
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---
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-
title: Duckdb
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-
emoji:
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colorFrom: red
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colorTo: pink
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sdk: docker
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-
pinned:
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-
---
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-
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Check out the configuration reference at https://huggingface.co/docs/hub/spaces-config-reference
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---
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title: Duckdb FastAPI Gradio
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+
emoji: ๐
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colorFrom: red
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colorTo: pink
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sdk: docker
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pinned: true
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---
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main.py
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@@ -0,0 +1,137 @@
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__doc__ = """
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This FastAPI app uses gradio components with SQL code input
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and HTML table output. The query is executed using DuckDB.
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The query results are shown in an iframe where the table
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is styled and made interactive using Datatables.net scripts.
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"""
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| 8 |
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| 9 |
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import gradio as gr
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| 10 |
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import pandas as pd
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| 11 |
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from fastapi import FastAPI
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| 12 |
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from fastapi.responses import HTMLResponse, RedirectResponse
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from itables import to_html_datatable
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| 14 |
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| 15 |
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from sql import Q
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| 16 |
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app = FastAPI()
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| 18 |
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def query_from_request(query, request: gr.Request):
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"""Process query from input block or from initial request.
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| 21 |
+
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| 22 |
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https://github.com/gradio-app/gradio/issues/7464#issuecomment-1960161591
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"""
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| 24 |
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if not query:
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| 25 |
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query_params = request.query_params
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| 26 |
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base64query = dict(query_params).get("q")
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| 27 |
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else:
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| 28 |
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base64query = Q(query).base64
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| 29 |
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if base64query in (None, "example"):
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| 30 |
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decoded = Q("""SELECT 42 AS answer, 'LU & E' AS question""")
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| 31 |
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base64query = decoded.base64
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| 32 |
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else:
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| 33 |
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decoded = Q.from_base64(base64query)
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| 34 |
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href = format_href(base64query)
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| 35 |
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result = f"""<iframe src="/q/{base64query}" width="90%" height="90%"></iframe>"""
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| 36 |
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return (decoded, href, result)
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+
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| 38 |
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def format_href(url: str):
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| 39 |
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href=f"localhost:7860/sql/{url}"
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| 40 |
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return f"""<a href="{href}">{href}</a>"""
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| 41 |
+
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| 42 |
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@app.get("/q/{base64query}", response_class=HTMLResponse)
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| 43 |
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def query_db(base64query: str|None = None):
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| 44 |
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decoded = Q.from_base64(base64query)
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| 45 |
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df = decoded.df()
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html = to_html_datatable(df)
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| 47 |
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return f"""
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| 48 |
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<h3>{decoded}</h3>
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| 49 |
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<div>{html}</div>
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| 50 |
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"""
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| 51 |
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| 52 |
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with gr.Blocks() as gradio_sql_interface:
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| 53 |
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with gr.Row():
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| 54 |
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with gr.Column():
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| 55 |
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header = gr.Markdown("# SQL Editor")
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| 56 |
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sql_code = gr.Code(language="sql", label="SQL Query", interactive=True)
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| 57 |
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copy_button = gr.HTML()
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| 58 |
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button = gr.Button("run")
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| 59 |
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with gr.Column():
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| 60 |
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markdown = gr.Markdown("# RESULTS")
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| 61 |
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results = gr.HTML()
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| 62 |
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button.click(query_from_request, [sql_code], [sql_code, copy_button, results])
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| 63 |
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gradio_sql_interface.load(query_from_request, [sql_code], [sql_code, copy_button, results], queue=True)
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| 64 |
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| 65 |
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app = gr.mount_gradio_app(app, gradio_sql_interface, path="/sql")
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| 66 |
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| 67 |
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@app.get("/")
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| 68 |
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@app.get("/sql")
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| 69 |
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@app.get("/sql/")
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| 70 |
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def redirect_to_example():
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| 71 |
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return RedirectResponse("/sql/?q=example")
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| 72 |
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| 73 |
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# no need to mount/unmount dynamically
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| 74 |
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# just change path and app blocks?
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# {
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| 76 |
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# "api.routes": [
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| 77 |
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# "...",
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| 78 |
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# "Mount(path='/gradiosql/qq', name='', app=<gradio.routes.App object at 0x71dc7b9d6d10>)"
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| 79 |
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# ]
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| 80 |
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# }
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| 81 |
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# @app.get("/sql/{query}")
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| 82 |
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# def render_query(query: str):
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| 83 |
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# # unmount any previous gradio apps
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| 84 |
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# # for route in app.routes:
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| 85 |
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# # if "gradio" in route.path:
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| 86 |
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# # del route
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| 87 |
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# # global app
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| 88 |
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# # routes = [route for route in app.routes if 'gradio' not in route.path]
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| 89 |
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# # app = Starlette(routes=routes)
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| 90 |
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# with gr.Blocks() as gradio_sql_interface:
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| 91 |
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# sql_code = gr.Code(value=query, language="sql", label="SQL Query", interactive=True)
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# button = gr.Button("run", link=f"/sql/{sql_code.value}")
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# markdown = gr.Markdown("# RESULTS")
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# html = gr.HTML(value=f"""<iframe src="/q/{query}" width="90%" height="90%"></iframe>""")
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# # button.click(None, [], [], js=f"window.open('/sql/{sql_code.value}', '_top')")
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# gradio_path = f"/gradiosql/{sql_code.value}"
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# gr.mount_gradio_app(app, gradio_sql_interface, path=gradio_path)
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# return RedirectResponse(gradio_path)
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| 102 |
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# del app.routes[index]
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# @app.get("/redirect")
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# async def redirect_example():
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# url = "/q/qqq"
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# return Response(status_code=302, headers={"Location": url})
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| 108 |
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| 109 |
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| 110 |
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# # return """hi<hr><iframe src="/" width="80%" height="80%"></iframe>"""
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| 112 |
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# @app.get("/qq/{apath}")
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# async def build_sql_interface(apath: str):
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# with gr.Blocks() as gradio_sql_interface:
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| 115 |
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# sql_code = gr.Code(value=apath, language="sql", label="SQL Query", interactive=True)
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| 116 |
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# html_code = gr.Code(value=html)
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| 117 |
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# html_html = gr.HTML(value=f"""<iframe src="/q/{apath}" width="80%" height="80%"></iframe>""")
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| 118 |
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# grdf = gr.DataFrame(value=df)
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# # gradio_sql_interface.queue()
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# gr.mount_gradio_app(app, gradio_sql_interface, path="/gradio/{apath}")
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# # import time; time.sleep(1)
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| 123 |
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# return RedirectResponse("/gradio/{{apath}}")
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| 124 |
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# async with httpx.AsyncClient() as client:
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| 125 |
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# try:
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| 126 |
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# response = await client.get("/gradio")
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| 127 |
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# response.raise_for_status()
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| 128 |
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# return response
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| 129 |
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# except httpx.HTTPError as e:
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| 130 |
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# return {"errresponse": e}
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| 131 |
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# pass #raise HTTPException(status_code=exc.status_code, detail=exc.msg)
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| 132 |
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# return {"path":path}
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| 133 |
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| 134 |
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# if __name__ == "__main__":
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# import uvicorn
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# uvicorn.run(app, host="0.0.0.0", port=7860)
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# appenv/.venv/bin/uvicorn main:app --host 0.0.0.0 --port 7860
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pup
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|
| 1 |
+
#!/usr/bin/bash
|
| 2 |
+
VERSION="pup v0 @ Apr 2 2024" # for Debian
|
| 3 |
+
|
| 4 |
+
|
| 5 |
+
####################
|
| 6 |
+
#### Parameters ####
|
| 7 |
+
####################
|
| 8 |
+
|
| 9 |
+
LOG=.woof.log
|
| 10 |
+
# PIXI_DEFAULT_TASK="echo" #"$HOME/appenv/.venv/bin/uvicorn main:app --host 0.0.0.0 --port 7860"
|
| 11 |
+
SYMLINK_ON_PATH=$HOME/.local/bin/pup
|
| 12 |
+
USAGE_MAIN="\n
|
| 13 |
+
\e[1m\e[4mUsage\e[0m: (each subcommand shows more help)\n
|
| 14 |
+
\e[0;33mpup\e[0m\n
|
| 15 |
+
\tinitialize and link ๐ถ to PATH\n
|
| 16 |
+
\e[0;33mpup py\e[0m\n
|
| 17 |
+
\tinteractively install base python to current folder\n
|
| 18 |
+
\tif you know what you need:\n
|
| 19 |
+
\tpup py3.12 jupyter jupyter-collaboration>=2\n
|
| 20 |
+
\t(additional arguments go into 'pixi add')\n
|
| 21 |
+
\e[0;33mpup fetch\e[0m\n
|
| 22 |
+
\tinteractively install packages with uv into specified virtual env\n
|
| 23 |
+
\tif you know what you need:\n
|
| 24 |
+
\tpup fetch . duckdb\n
|
| 25 |
+
\tpup fetch newviz altair seaborn\n
|
| 26 |
+
\e[0;33mpup install\e[0m\n
|
| 27 |
+
\tsame as pup fetch\n
|
| 28 |
+
\e[0;33mpup home\e[0m\n
|
| 29 |
+
\tshow ๐ถ's home folder\n
|
| 30 |
+
\e[0;33mpup kernel\e[0m\n
|
| 31 |
+
\tinteractively create Jupyter kernel linked to ๐ถ's environment\n
|
| 32 |
+
\tif you know what you need:\n
|
| 33 |
+
\tpup kernel . pup3.11-home\n
|
| 34 |
+
\tpup kernel dataenv pup3.11-data\n
|
| 35 |
+
\e[0;33mpup play\e[0m\n
|
| 36 |
+
\truns PIXI_DEFAULT_TASK (default: 'jupyter notebook')\n
|
| 37 |
+
\e[0;33mpup whereami\e[0m\n
|
| 38 |
+
\tin case you got lost: log of ๐ถ's commands thus far\n
|
| 39 |
+
\e[0;33mpup which\e[0m\n
|
| 40 |
+
\tshow ๐ถ's current symlink\n
|
| 41 |
+
\n"
|
| 42 |
+
|
| 43 |
+
|
| 44 |
+
###################
|
| 45 |
+
#### Functions ####
|
| 46 |
+
###################
|
| 47 |
+
|
| 48 |
+
log_command() {
|
| 49 |
+
ts=$(date +'%FT%T')
|
| 50 |
+
echo "# $ts" >> "$(pup home)/$LOG"
|
| 51 |
+
echo "$1" >> "$(pup home)/$LOG"
|
| 52 |
+
}
|
| 53 |
+
|
| 54 |
+
log() {
|
| 55 |
+
ts=$(date +'%FT%T')
|
| 56 |
+
for arg in "$@"; do
|
| 57 |
+
echo "# $ts - $arg" | tee -a "$(pup home)/$LOG"
|
| 58 |
+
done
|
| 59 |
+
}
|
| 60 |
+
|
| 61 |
+
|
| 62 |
+
#######################
|
| 63 |
+
#### CORE COMMANDS ####
|
| 64 |
+
#######################
|
| 65 |
+
|
| 66 |
+
#### init (no args) ####
|
| 67 |
+
if [ -z "$1" ]; then
|
| 68 |
+
# init pup and show usage
|
| 69 |
+
echo -e $USAGE_MAIN
|
| 70 |
+
|
| 71 |
+
# link
|
| 72 |
+
SYMLINK_CURRENT=$(readlink -f "$SYMLINK_ON_PATH")
|
| 73 |
+
if [ "$SYMLINK_CURRENT" != "$(pwd)/pup" ] && [ -f "./pup" ]; then
|
| 74 |
+
SYMLINK_PATH_FOLDER=${SYMLINK_ON_PATH%/*}
|
| 75 |
+
mkdir -p "$SYMLINK_PATH_FOLDER"
|
| 76 |
+
ln -s -f "$(pwd)"/pup $SYMLINK_ON_PATH
|
| 77 |
+
fi
|
| 78 |
+
log_command "$0 $*"
|
| 79 |
+
log woof!
|
| 80 |
+
log "๐ถ = $(pup which)"
|
| 81 |
+
# initialize Pixi project in 'pup home'
|
| 82 |
+
pup pixi init
|
| 83 |
+
exit 0
|
| 84 |
+
fi
|
| 85 |
+
#### py|python ####
|
| 86 |
+
if [[ "$1" =~ ^py$|^python$ ]]; then
|
| 87 |
+
USAGE="\n
|
| 88 |
+
\e[1m\e[4mUsage\e[0m: pup $1{version} [ADDITIONAL PACKAGES]\n
|
| 89 |
+
For example:\n
|
| 90 |
+
\tpup py3.12 jupyter jupyter-collaboration>=2\n
|
| 91 |
+
\e[4mNote\e[0m:\n
|
| 92 |
+
\tthis command is meant to be used once during the first base layer setup;\n
|
| 93 |
+
\tbeyond that, use 'pixi add'\n
|
| 94 |
+
\n"
|
| 95 |
+
echo -e $USAGE
|
| 96 |
+
read -ei "" -p $'\e[0;33minstall which python version (blank = latest)? \e[0m' PYVER
|
| 97 |
+
PACKAGES=${@:2}
|
| 98 |
+
read -ei "${PACKAGES:-notebook>=7}" -p $'\e[0;33many additional packages? \e[0m' PACKAGES
|
| 99 |
+
pup pixi init
|
| 100 |
+
COMMAND="pixi add uv python${PYVER:+=$PYVER} $PACKAGES"
|
| 101 |
+
log "๐ถ asked for: '$COMMAND'"
|
| 102 |
+
$COMMAND
|
| 103 |
+
exit 0
|
| 104 |
+
fi
|
| 105 |
+
if [[ "$1" =~ ^py3.*$ ]]; then
|
| 106 |
+
log_command "$0 $*"
|
| 107 |
+
pup pixi init
|
| 108 |
+
COMMAND="pixi add uv python=${1#py} ${@:2}"
|
| 109 |
+
log "๐ถ asked for: '$COMMAND'"
|
| 110 |
+
$COMMAND
|
| 111 |
+
log "โจ $(pixi run python -VV)"
|
| 112 |
+
exit 0
|
| 113 |
+
fi
|
| 114 |
+
#### fetch|install ####
|
| 115 |
+
if [[ "$1" =~ ^fetch$|^install$ ]]; then
|
| 116 |
+
USAGE="\e[1m\e[4mUsage\e[0m: pup $1 [WHERE] [WHAT] [OPTIONS]"
|
| 117 |
+
if [ -z "$2" ]; then
|
| 118 |
+
echo -e $USAGE
|
| 119 |
+
read -ei "." -p "Fetch packages where? " WHERE
|
| 120 |
+
read -ei "" -p "What packages? " WHAT
|
| 121 |
+
read -ei "" -p "Options to pass to 'uv pip install'? " OPTIONS
|
| 122 |
+
COMMAND="pup fetch $WHERE $WHAT $OPTIONS"
|
| 123 |
+
log "๐ถ asked for: '$COMMAND'"
|
| 124 |
+
$COMMAND
|
| 125 |
+
exit 0
|
| 126 |
+
fi
|
| 127 |
+
if [ $# -eq 2 ]; then
|
| 128 |
+
echo "`๐ถ fetch` needs more arguments"
|
| 129 |
+
echo -e $USAGE
|
| 130 |
+
fi
|
| 131 |
+
if [ $# -gt 2 ] && [ "$2" = "." ]; then
|
| 132 |
+
PYTHON=$(pixi run which python)
|
| 133 |
+
fi
|
| 134 |
+
if [ $# -gt 2 ] && [ "$2" != "." ]; then
|
| 135 |
+
pup new $2
|
| 136 |
+
PYTHON="$(pup home)/$2/.venv/bin/python"
|
| 137 |
+
fi
|
| 138 |
+
COMMAND="pixi run uv pip install -p $PYTHON ${@:3}"
|
| 139 |
+
log "๐ถ asked for: '$COMMAND'"
|
| 140 |
+
$COMMAND
|
| 141 |
+
exit 0
|
| 142 |
+
fi
|
| 143 |
+
#### kernel ####
|
| 144 |
+
if [ "$1" == "kernel" ]; then
|
| 145 |
+
USAGE="\e[1m\e[4mUsage\e[0m: pup $1 [WHERE] [KERNEL_NAME]"
|
| 146 |
+
if [ -z "$2" ]; then
|
| 147 |
+
echo -e $USAGE
|
| 148 |
+
read -ei "." -p "Install kernel for which environment? " WHERE
|
| 149 |
+
PYVER=$(pixi run python -V); PYVER=${PYVER#Python }
|
| 150 |
+
read -ei "pup$PYVER-$WHERE" -p "Unique kernel name? (allowed characters: [a-zA-Z0-9.-_]) " KERNEL_NAME
|
| 151 |
+
COMMAND="pup kernel $WHERE $KERNEL_NAME"
|
| 152 |
+
log "๐ถ asked for: '$COMMAND'"
|
| 153 |
+
$COMMAND
|
| 154 |
+
exit 0
|
| 155 |
+
fi
|
| 156 |
+
if [ $# -eq 2 ]; then
|
| 157 |
+
echo "`๐ถ kernel` needs more arguments"
|
| 158 |
+
echo -e $USAGE
|
| 159 |
+
fi
|
| 160 |
+
if [ $# -gt 2 ] && [ "$2" = "." ]; then
|
| 161 |
+
PYTHON=$(pixi run which python)
|
| 162 |
+
fi
|
| 163 |
+
if [ $# -gt 2 ] && [ "$2" != "." ]; then
|
| 164 |
+
PYTHON="$(pup home)/$2/.venv/bin/python"
|
| 165 |
+
fi
|
| 166 |
+
pup fetch $2 ipykernel
|
| 167 |
+
COMMAND="$PYTHON -m ipykernel install --user --name $3"
|
| 168 |
+
log "๐ถ asked for: '$COMMAND'"
|
| 169 |
+
$COMMAND
|
| 170 |
+
exit 0
|
| 171 |
+
fi
|
| 172 |
+
#### new ####
|
| 173 |
+
if [ "$1" == "new" ]; then
|
| 174 |
+
log_command "$0 $*"
|
| 175 |
+
VENV_PATH="$(pup home)/$2/.venv"
|
| 176 |
+
if [ ! -d "$VENV_PATH" ]; then
|
| 177 |
+
pixi run uv venv -p "$(pixi run which python)" $VENV_PATH
|
| 178 |
+
log "pup & uv created new environment in $2"
|
| 179 |
+
else
|
| 180 |
+
log "found existing uv virtual environment $2"
|
| 181 |
+
fi
|
| 182 |
+
exit 0
|
| 183 |
+
fi
|
| 184 |
+
#### play ####
|
| 185 |
+
if [ "$1" == "play" ]; then
|
| 186 |
+
pixi run start
|
| 187 |
+
exit 0
|
| 188 |
+
fi
|
| 189 |
+
#########################
|
| 190 |
+
#### HELPER COMMANDS ####
|
| 191 |
+
#########################
|
| 192 |
+
#### home ####
|
| 193 |
+
if [ "$1" == "home" ]; then
|
| 194 |
+
if [ -L "$0" ]; then
|
| 195 |
+
dirname $(readlink -f $SYMLINK_ON_PATH)
|
| 196 |
+
else
|
| 197 |
+
realpath $(dirname $0)
|
| 198 |
+
fi
|
| 199 |
+
exit 0
|
| 200 |
+
fi
|
| 201 |
+
#### pixi ####
|
| 202 |
+
if [ "$1" == "pixi" ]; then
|
| 203 |
+
if [ "$2" == "init" ]; then
|
| 204 |
+
# install and init Pixi project in pup's home dir
|
| 205 |
+
if ! command -v pixi &> /dev/null; then
|
| 206 |
+
export SHELL=bash
|
| 207 |
+
curl -fsSL https://pixi.sh/install.sh | bash
|
| 208 |
+
fi
|
| 209 |
+
PUPHOME=$(pup home)
|
| 210 |
+
if [[ ! -f "$PUPHOME"/pixi.toml ]]; then
|
| 211 |
+
pixi init "$PUPHOME"
|
| 212 |
+
# pixi task add start "$PIXI_DEFAULT_TASK"
|
| 213 |
+
fi
|
| 214 |
+
exit 0
|
| 215 |
+
fi
|
| 216 |
+
if [ "$2" == "rm" ]; then
|
| 217 |
+
# remove pixi files
|
| 218 |
+
rm -r "$(pup home)"/.pixi "$(pup home)"/pixi*
|
| 219 |
+
exit 0
|
| 220 |
+
fi
|
| 221 |
+
fi
|
| 222 |
+
#### version ####
|
| 223 |
+
if [ "$1" == "version" ]; then
|
| 224 |
+
echo $VERSION
|
| 225 |
+
exit 0
|
| 226 |
+
fi
|
| 227 |
+
#### which ####
|
| 228 |
+
if [ "$1" == "which" ]; then
|
| 229 |
+
echo $(ls "$SYMLINK_ON_PATH") -\> $(readlink -f $SYMLINK_ON_PATH)
|
| 230 |
+
exit 0
|
| 231 |
+
fi
|
| 232 |
+
#### whereami ####
|
| 233 |
+
if [ "$1" == "whereami" ]; then
|
| 234 |
+
cat "$(pup home)/$LOG"
|
| 235 |
+
exit 0
|
| 236 |
+
fi
|
| 237 |
+
#### unknown command ####
|
| 238 |
+
echo -e "\e[0;33m๐ถ does not know 'pup $*'\e[0m\nrun 'pup' to list known commands"
|
sql.py
ADDED
|
@@ -0,0 +1,35 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import base64
|
| 2 |
+
import duckdb
|
| 3 |
+
class Q(str):
|
| 4 |
+
UNSAFE = ["CREATE", "DELETE", "DROP", "INSERT", "UPDATE"]
|
| 5 |
+
|
| 6 |
+
def __init__(self, query: str):
|
| 7 |
+
self.is_safe = not any([cmd in query.upper() for cmd in self.UNSAFE])
|
| 8 |
+
|
| 9 |
+
def run(self, sql_engine=None):
|
| 10 |
+
try:
|
| 11 |
+
if sql_engine is None:
|
| 12 |
+
return self.run_duckdb()
|
| 13 |
+
else:
|
| 14 |
+
return self.run_sql(sql_engine)
|
| 15 |
+
except Exception as e:
|
| 16 |
+
pass
|
| 17 |
+
|
| 18 |
+
def run_duckdb(self):
|
| 19 |
+
return duckdb.sql(self)
|
| 20 |
+
|
| 21 |
+
def df(self, sql_engine=None):
|
| 22 |
+
result = self.run(sql_engine=sql_engine)
|
| 23 |
+
if result is None: return
|
| 24 |
+
result_df = result.df()
|
| 25 |
+
return result_df
|
| 26 |
+
|
| 27 |
+
|
| 28 |
+
@property
|
| 29 |
+
def base64(self):
|
| 30 |
+
return base64.b64encode(self.encode()).decode()
|
| 31 |
+
|
| 32 |
+
@classmethod
|
| 33 |
+
def from_base64(cls, b64):
|
| 34 |
+
"""Initializing from base64-encoded URL paths."""
|
| 35 |
+
return cls(base64.b64decode(b64).decode())
|