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Fix make_async().
Browse files
lynxkite-bio/src/lynxkite_bio/nims.py
CHANGED
@@ -3,7 +3,9 @@
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from lynxkite_graph_analytics import Bundle
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from lynxkite.core import ops
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import httpx
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import pandas as pd
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import os
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from . import k8s
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@@ -122,14 +124,15 @@ def view_molecule(
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row_index: int = 0,
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):
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molecule_data = bundle.dfs[molecule_table][molecule_column].iloc[row_index]
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return {
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"data": molecule_data,
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"format": "pdb"
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if molecule_data.startswith("ATOM")
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else "sdf"
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if molecule_data.startswith("CTfile")
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else "smiles",
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}
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from lynxkite_graph_analytics import Bundle
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from lynxkite.core import ops
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import httpx
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import io
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import pandas as pd
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import rdkit
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import os
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from . import k8s
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row_index: int = 0,
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):
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molecule_data = bundle.dfs[molecule_table][molecule_column].iloc[row_index]
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if isinstance(molecule_data, rdkit.Chem.Mol):
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sio = io.StringIO()
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with rdkit.Chem.SDWriter(sio) as w:
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w.write(molecule_data)
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molecule_data = sio.getvalue()
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return {
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"data": molecule_data,
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"format": "pdb" if molecule_data.startswith("ATOM") else "sdf",
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}
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lynxkite-core/src/lynxkite/core/ops.py
CHANGED
@@ -254,8 +254,8 @@ def op(
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_view = "image"
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func = matplotlib_to_image(func)
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if slow:
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func = mem.cache(func)
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func = make_async(func)
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# Positional arguments are inputs.
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inputs = [
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Input(name=name, type=param.annotation)
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_view = "image"
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func = matplotlib_to_image(func)
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if slow:
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func = make_async(func)
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func = mem.cache(func)
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# Positional arguments are inputs.
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inputs = [
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Input(name=name, type=param.annotation)
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