Update mcp/mygene.py
Browse files- mcp/mygene.py +14 -13
mcp/mygene.py
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@@ -1,21 +1,22 @@
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No API‑key required; 500 QPS community quota.
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"""
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from functools import lru_cache
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_BASE = "https://mygene.info/v3"
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@lru_cache(maxsize=128)
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async def fetch_gene_info(query: str) -> dict: # noqa: C901 – simple IO fn
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"""Return first hit dict or {} if nothing found.
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"""
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params = {
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"q": query,
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"fields": "symbol,name,summary,alias,entrezgene,clinvar,location,go",
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@@ -25,4 +26,4 @@ async def fetch_gene_info(query: str) -> dict: # noqa: C901 – simple IO fn
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resp = await client.get(f"{_BASE}/query", params=params)
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resp.raise_for_status()
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hits = resp.json().get("hits", [])
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return hits[0] if hits else {}
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#!/usr/bin/env python3
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"""Async wrapper for MyGene.info API (https://mygene.info)
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Provides a single helper:
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• `fetch_gene_info(query)` → returns the first matching hit dict or `{}`.
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No API‑key needed; community tier allows 500 QPS.
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"""
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from __future__ import annotations
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import httpx
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from functools import lru_cache
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_BASE = "https://mygene.info/v3"
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@lru_cache(maxsize=128)
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async def fetch_gene_info(query: str) -> dict: # noqa: D401
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"""Return first hit for *query* or an empty dict."""
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params = {
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"q": query,
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"fields": "symbol,name,summary,alias,entrezgene,clinvar,location,go",
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resp = await client.get(f"{_BASE}/query", params=params)
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resp.raise_for_status()
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hits = resp.json().get("hits", [])
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return hits[0] if hits else {}
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