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Update api_clients/umls_client.py
Browse files- api_clients/umls_client.py +45 -0
api_clients/umls_client.py
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# api_clients/umls_client.py
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"""
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Client for the NLM Unified Medical Language System (UMLS) API.
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Handles the complex ticket-based authentication.
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"""
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import aiohttp
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from lxml import html
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from .config import UMLS_API_KEY, UMLS_AUTH_URL, UMLS_BASE_URL, REQUEST_HEADERS
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class UMLSClient:
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def __init__(self, session: aiohttp.ClientSession):
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self.session = session
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self.service_ticket = None
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async def authenticate(self):
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"""Gets a single-use service ticket for API requests."""
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if not UMLS_API_KEY:
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print("Warning: UMLS_API_KEY not found. UMLS features will be disabled.")
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return False
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params = {'apikey': UMLS_API_KEY}
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async with self.session.post(UMLS_AUTH_URL, data=params, headers=REQUEST_HEADERS) as resp:
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if resp.status == 201:
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response_text = await resp.text()
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self.service_ticket = html.fromstring(response_text).find('.//form').get('action')
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return True
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else:
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print(f"Error authenticating with UMLS: {resp.status}")
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return False
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async def get_cui_for_term(self, term: str):
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"""Searches for a Concept Unique Identifier (CUI) for a given term."""
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if not await self.authenticate():
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return None
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query = {'string': term, 'ticket': self.service_ticket}
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url = f"{UMLS_BASE_URL}/search/current"
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async with self.session.get(url, params=query, headers=REQUEST_HEADERS) as resp:
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if resp.status == 200:
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data = await resp.json()
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results = data.get('result', {}).get('results', [])
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return results[0] if results else None
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else:
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print(f"Error searching UMLS for term '{term}': {resp.status}")
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return None
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