Upload streamlit_apps_config.py

streamlit_apps_config.py

@@ -0,0 +1,141 @@
+import os
+PRODUCTION = False
+if PRODUCTION:
+    prepath = "/Users/vkocaman/cache_pretrained/"
+    path = "/Users/vkocaman/cache_pretrained/2.4/"
+    jar_path = "/home/ubuntu/jars/"
+    input_folder = '/home/ubuntu/streamlit/dia/resources/'
+    rules_folder = '/home/ubuntu/streamlit/dia/resources/rules/'
+else:
+    project_path = "F:/JSL/streamlit-demo-apps/"
+
+    prepath = "file:///E://JSL/SparkNLPSUITE/models/cache_pretrained/"
+    path = "file:///E://JSL/SparkNLPSUITE/models/cache_pretrained/2.4/"
+    jar_path = "file:///E:/JSL/Jars/streamlit4/"
+    rules_folder = "file:///E://JSL/SparkNLPSUITE/streamlit-demo-apps/resources/rules/"
+    models_folder = "file:///E://JSL/SparkNLPSUITE/models/"
+
+ENTITIES_FOR_ICD10 = ['problem', 'diagnosis', 'procedure name', 'lab name', 'symptom_name', 'procedure_name', 'procedure', 'lab_name', 'pathological_formation', 'cancer']
+LOGO_PATH = '../resources/jsl-logo.png'
+available_models = []
+
+#APP STYLE
+MAX_WIDTH = 1600
+PADDING_TOP = 0.25
+PADDING_BOTTOM = 0.25
+PADDING_RIGHT = 4
+PADDING_LEFT = 4
+COLOR = 'black'
+BACKGROUND_COLOR = 'white'
+
+HTML_WRAPPER = """<div class="scroll entities" style="overflow-x: auto; border: 1px solid #e6e9ef; border-radius: 0.25rem; padding: 0.25rem; margin-bottom: 2.5rem; white-space:pre-wrap">{}</div>"""
+HTML_INDEX_WRAPPER = """<div ">{}</div>"""
+
+STYLE_CONFIG_OLD = f"""
+<style>
+    @import url('https://fonts.googleapis.com/css2?family=Montserrat:wght@300;400;500;600;700&display=swap');
+    *:not(text){{
+      font-family: Montserrat;
+    }}
+
+    .reportview-container .main .block-container{{
+        max-width: {MAX_WIDTH}px;
+        padding-top: {PADDING_TOP}rem;
+        padding-right: {PADDING_RIGHT}rem;
+        padding-left: {PADDING_LEFT}rem;
+        padding-bottom: {PADDING_BOTTOM}rem;
+    }}
+    .reportview-container .main {{
+        color: {COLOR};
+        background-color: {BACKGROUND_COLOR};
+    }}
+    div.scroll {{
+                margin:1px, 1px;
+                padding:1px;
+                width: 100%;
+                height: 500px;
+                overflow-x: hidden;
+                overflow-x: auto;
+    }}
+    .entity-wrapper{{
+        padding: 1px;
+        display: inline-grid;
+        text-align:center;
+        margin-bottom:1px;
+        border-radius: 5px 5px
+    }}
+    .entity-name{{
+        background: #f1f2f3;
+        color: #3c3e44;
+        padding: 1px;
+        border-color: #484b51;
+        border-width: medium;
+        border-radius: 5px 5px;
+    }}
+    .entity-type{{
+        color: #272727;
+        text-transform: uppercase;
+        font-family: roboto;
+        font-size: 13px;
+    }}
+    .reportview-container .markdown-text-container{{
+        font-family: roboto !important;
+        color: dimgray !important;
+        line-height: normal !important;
+    }}
+    .reportview-container h2
+    {{
+        font-weight: 400 !important;
+        font-size: 1.5rem !important;
+        line-height: 1.6!important;
+    }}
+    .reportview-container h2
+    {{
+        font-weight: 300 !important;
+        font-size: 1.3rem !important;
+        line-height: 1.4!important;
+    }}
+
+
+</style>
+"""
+
+with open('./utils/style.css') as f:
+    STYLE_CONFIG_NEW = f.read()
+STYLE_CONFIG = STYLE_CONFIG_OLD + '<style>{}</style>'.format(STYLE_CONFIG_NEW)
+
+LABEL_COLORS = {'problem':'#0C8888',
+               'test':'#FF33C1',
+               'treatment':'#3196D4',
+                'multi':'#ccfff5',
+                'multi-tissue_structure':'#8dd8b4',
+                'cell':'#ffe6cc',
+                'organism':'#ffddcc',
+                'gene_or_gene_product':'#fff0b3',
+                'organ':'#e6e600',
+                'simple_chemical':'#ffd699',
+
+                'per':'#0C8888', 'pers':'#0C8888','person':'#0C8888',
+                'org':'#FF33C1',
+                'misc': '#3196D4', 'mis': '#3196D4',
+                'loc':'#5B00A3', 'location':'#5B00A3',
+
+
+                'drug':'#33BBFF',
+                'diagnosis':'#b5a1c9',
+                'maybe':'#FFB5C5',
+                'lab_result':'#3abd80',
+                'negated':'#CD3700',
+                'name':'#C0FF3E',
+                'lab_name':'#698B22',
+                'modifier':'#8B475D',
+                'symptom_name':'#CDB7B5',
+                'section_name':'#8B7D7B',
+                'procedure_name':'#48D1CC',
+                'grading':"#8c61e8",
+                'size':"#746b87",
+                'organism_substance':'#ffaa80',
+                'gender':'#ffacb7',
+                'age':'#ffe0ac',
+                'date': '#a6b1e1'
+                }