Remove large file train_info.txt

app.py

@@ -7,9 +7,10 @@ import subprocess
 import shutil
 import matplotlib.pyplot as plt
 from sklearn.metrics import roc_curve, auc
+import pandas as pd
 # Define the function to process the input file and model selection
 
-def process_file(file,label,info,inc_val,progress=Progress(track_tqdm=True)):
+def process_file(file,label,info,model_name,inc_slider,progress=Progress(track_tqdm=True)):
     # progress = gr.Progress(track_tqdm=True)
     progress(0, desc="Starting the processing") 
     with open(file.name, 'r') as f:
@@ -21,27 +22,66 @@ def process_file(file,label,info,inc_val,progress=Progress(track_tqdm=True)):
     shutil.copyfile(file.name, saved_test_dataset)
     shutil.copyfile(label.name, saved_test_label)
     shutil.copyfile(info.name, saved_train_info)
+
+
+    # Load the test_info file and the graduation rate file
+    test_info = pd.read_csv('train_info.txt', sep=',', header=None, engine='python')
+    grad_rate_data = pd.DataFrame(pd.read_pickle('school_grduation_rate.pkl'),columns=['school_number','grad_rate'])  # Load the grad_rate data
+
+    # Step 1: Extract unique school numbers from test_info
+    unique_schools = test_info[0].unique()
+
+    # Step 2: Filter the grad_rate_data using the unique school numbers
+    schools = grad_rate_data[grad_rate_data['school_number'].isin(unique_schools)]
+
+    # Define a threshold for high and low graduation rates (adjust as needed)
+    grad_rate_threshold = 0.9  
+
+    # Step 4: Divide schools into high and low graduation rate groups
+    high_grad_schools = schools[schools['grad_rate'] >= grad_rate_threshold]['school_number'].unique()
+    low_grad_schools = schools[schools['grad_rate'] < grad_rate_threshold]['school_number'].unique()
+
+    # Step 5: Sample percentage of schools from each group
+    high_sample = pd.Series(high_grad_schools).sample(frac=inc_slider/100, random_state=1).tolist()
+    low_sample = pd.Series(low_grad_schools).sample(frac=inc_slider/100, random_state=1).tolist()
+
+    # Step 6: Combine the sampled schools
+    random_schools = high_sample + low_sample
+
+    # Step 7: Get indices for the sampled schools
+    indices = test_info[test_info[0].isin(random_schools)].index.tolist()
+
+    # Load the test file and select rows based on indices
+    test = pd.read_csv('train.txt', sep=',', header=None, engine='python')
+    selected_rows_df2 = test.loc[indices]
+
+    # Save the selected rows to a file
+    selected_rows_df2.to_csv('selected_rows.txt', sep='\t', index=False, header=False, quoting=3, escapechar=' ')
+
+   
     # For demonstration purposes, we'll just return the content with the selected model name
-    # if(model_name=="highGRschool10"):
-    #     checkpoint="ratio_proportion_change3/output/FS/bert_fine_tuned.model.ep32"
-    # elif(model_name=="lowGRschoolAll"):
-    #     checkpoint="ratio_proportion_change3/output/IS/bert_fine_tuned.model.ep14"
-    # elif(model_name=="fullTest"):
-    #     checkpoint="ratio_proportion_change3/output/correctness/bert_fine_tuned.model.ep48"
-    # else:
-    #     checkpoint=None
-    # print(checkpoint)
-    if (inc_val<5):
-        model_name="highGRschool10"
-    elif(inc_val>=5 & inc_val<10):
-        model_name="highGRschool10"
+    if(model_name=="High Graduated Schools"):
+        finetune_task="highGRschool10"
+    elif(model_name== "Low Graduated Schools" ):
+        finetune_task="highGRschool10"
+    elif(model_name=="Full Set"):
+        finetune_task="highGRschool10"
     else:
-        model_name="highGRschool10"
+        finetune_task=None
+    # print(checkpoint)
+    progress(0.1, desc="Files created and saved")
+    # if (inc_val<5):
+    #     model_name="highGRschool10"
+    # elif(inc_val>=5 & inc_val<10):
+    #     model_name="highGRschool10"
+    # else:
+    #     model_name="highGRschool10"
+    progress(0.2, desc="Executing models")
     subprocess.run([
         "python", "new_test_saved_finetuned_model.py",
         "-workspace_name", "ratio_proportion_change3_2223/sch_largest_100-coded",
-        "-finetune_task", model_name,
-        # "-test_dataset_path","../../../../train.txt",
+        "-finetune_task", "highGRschool10",
+        "-test_dataset_path","../../../../selected_rows.txt",
         # "-test_label_path","../../../../train_label.txt",
         "-finetuned_bert_classifier_checkpoint", 
         "ratio_proportion_change3_2223/sch_largest_100-coded/output/highGRschool10/bert_fine_tuned.model.ep42",
@@ -77,12 +117,26 @@ def process_file(file,label,info,inc_val,progress=Progress(track_tqdm=True)):
     progress(1.0)
     # Prepare text output
     text_output = f"Model: {model_name}\nResult:\n{result}"
-
+    # Prepare text output with HTML formatting
+    text_output = f"""
+    Model: {model_name}\n
+    Result Summary:\n
+    -----------------\n
+    Average Loss: {result['avg_loss']:.4f}\n
+    Total Accuracy: {result['total_acc']:.2f}%\n
+    Precision: {result['precisions']:.2f}\n
+    Recall: {result['recalls']:.2f}\n
+    F1-Score: {result['f1_scores']:.2f}\n
+    Time Taken: {result['time_taken_from_start']:.2f} seconds\n
+    AUC Score: {result['auc_score']:.4f}\n
+    -----------------\n
+    Note: The ROC Curve is also displayed for the evaluation.
+    """
     return text_output,plot_path
 
 # List of models for the dropdown menu
 
-models = ["highGRschool10", "lowGRschoolAll", "fullTest"]
+models = ["High Graduated Schools", "Low Graduated Schools", "Full Set"]
 
 # Create the Gradio interface
 with gr.Blocks(css="""
@@ -275,10 +329,10 @@ tbody.svelte-18wv37q>tr.svelte-18wv37q:nth-child(odd) {
 
         info_input = gr.File(label="Upload test info", file_types=['.txt'], elem_classes="file-box")
     
-    # model_dropdown = gr.Dropdown(choices=models, label="Select Finetune Task", elem_classes="dropdown-menu")
+    model_dropdown = gr.Dropdown(choices=models, label="Select Finetune Task", elem_classes="dropdown-menu")
 
     
-    increment_slider = gr.Slider(minimum=1, maximum=50, step=5, label="Schools number", value=1)
+    increment_slider = gr.Slider(minimum=5, maximum=100, step=5, label="Schools Percentage", value=5)
     
     with gr.Row():
         output_text = gr.Textbox(label="Output Text")
@@ -286,7 +340,7 @@ tbody.svelte-18wv37q>tr.svelte-18wv37q:nth-child(odd) {
 
     btn = gr.Button("Submit")
  
-    btn.click(fn=process_file, inputs=[file_input,label_input,info_input,increment_slider], outputs=[output_text,output_image])
+    btn.click(fn=process_file, inputs=[file_input,label_input,info_input,model_dropdown,increment_slider], outputs=[output_text,output_image])
 
 
 # Launch the app

new_test_saved_finetuned_model.py

@@ -495,7 +495,7 @@ def train():
     parser.add_argument("-hs", "--hidden", type=int, default=64, help="hidden size of transformer model") #64
     parser.add_argument("-l", "--layers", type=int, default=4, help="number of layers") #4
     parser.add_argument("-a", "--attn_heads", type=int, default=4, help="number of attention heads") #8
-    parser.add_argument("-s", "--seq_len", type=int, default=5, help="maximum sequence length")
+    parser.add_argument("-s", "--seq_len", type=int, default=128, help="maximum sequence length")
 
     parser.add_argument("-b", "--batch_size", type=int, default=500, help="number of batch_size") #64
     parser.add_argument("-e", "--epochs", type=int, default=1)#1501, help="number of epochs") #501
@@ -508,7 +508,7 @@ def train():
     # parser.add_argument("--corpus_lines", type=int, default=None, help="total number of lines in corpus")
     parser.add_argument("--cuda_devices", type=int, nargs='+', default=None, help="CUDA device ids")
     # parser.add_argument("--on_memory", type=bool, default=False, help="Loading on memory: true or false")
-
+    
     parser.add_argument("--dropout", type=float, default=0.1, help="dropout of network")
     parser.add_argument("--lr", type=float, default=1e-05, help="learning rate of adam") #1e-3
     parser.add_argument("--adam_weight_decay", type=float, default=0.01, help="weight_decay of adam")

result.txt

@@ -1,7 +1,7 @@
-avg_loss: 0.8249401861713046
-total_acc: 50.0
-precisions: 0.25
-recalls: 0.5
-f1_scores: 0.3333333333333333
-time_taken_from_start: 30.98168659210205
-auc_score: 0.7724651292107545
+avg_loss: 0.5631513595581055
+total_acc: 69.7320542507443
+precisions: 0.7236992960620143
+recalls: 0.6973205425074429
+f1_scores: 0.6879225873063946
+time_taken_from_start: 73.04951095581055
+auc_score: 0.7452296224317393

roc_data.pkl

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:f4beb5de79dfb3592402832ced8db0c87f3264e46c0813553c40728c7ddafed5
+size 29285

school_grduation_rate.pkl

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:6c0c99dd8fc601de1fc8f4af5880bf71b7198c09bf0d016a880b02043e0b3d03
+size 18356

train_info.txt

@@ -1 +0,0 @@
-test