code
stringlengths 2
1.05M
| repo_name
stringlengths 5
110
| path
stringlengths 3
922
| language
stringclasses 1
value | license
stringclasses 15
values | size
int64 2
1.05M
|
|---|---|---|---|---|---|
#!/usr/bin/env bash
echo 'Installing erlang from Canonical Repositories installation...'
apt-get -qy install erlang rabbitmq-server
|
jdantonio/vagrant
|
scripts/erlang.sh
|
Shell
|
mit
| 134 |
#! /bin/bash
BASEDIR="`pwd`"
SWEETROOT="../../"
cd "$BASEDIR"
# h0=g=f=1
TS=$((120))
OTS=$((TS*20))
RES=128
BENCH="galewsky"
#VISCOSITY=100000
VISCOSITY=0
SIMTIME=720000
PARAMS=""
#PARAMS+=" --output-file-mode bin"
PARAMS+=" -M $RES"
PARAMS+=" --dt $TS"
PARAMS+=" -o $OTS -u $VISCOSITY -t $SIMTIME --benchmark-name $BENCH --timestepping-method=ln_erk --timestepping-order=4"
PARAMS+=" --output-file-mode=bin"
EXEC="$(ls -1 $SWEETROOT/build/swe_sphere_*_release)"
echo "******************************************************************"
echo "$EXEC $PARAMS"
echo "******************************************************************"
$EXEC $PARAMS || exit 1
|
schreiberx/sweet
|
benchmarks_sphere/galewsky_bin_output/run_2_benchmark.sh
|
Shell
|
mit
| 669 |
#!/bin/bash
set -eu
totp_code="$(
pass show misc/totp-codes |
jq -r -c '.[] | select( .name == "Point: Amazon Web Services" ) | .secret' |
oathtool --base32 --totp -
)"
echo "Logging in... (TOTP code $totp_code)"
"$HOME/git/point-tools/scripts/aws-get-session-token.sh" point "$totp_code"
|
ammongit/scripts
|
work/login-aws.sh
|
Shell
|
mit
| 294 |
#! /usr/local/bin/bash
strategies=(identity reverse)
usage() {
echo "Usage: $0 [strategies] output_dir file"
echo "available strategies:"
for strat in ${strategies[@]}
do
echo -e " $strat"
done
}
argc=$#
if [ $argc -lt 3 ]
then
usage
exit 1
fi
nstrats=$(expr $argc - 2)
declare -a strats
for i in $(seq 1 $nstrats)
do
strats[$i]=$1
shift
done
output_dir=$1
shift
filename=$1
shift
if ! [ -d $output_dir ]
then
echo "Directory $output_dir does not exist"
exit 2
fi
if ! [ -e $filename ]
then
echo "Input file $filename does not exist"
exit 3
fi
for strat in ${strats[@]}
do
s=$strat
s+="_"
base=$(basename $filename)
cp $filename "$output_dir/$s$base"
line=$(skel -reorder -$strat "$output_dir/$s$base" --)
echo $line
echo "$base"
done
|
Baltoli/skeletons
|
scripts/reorder.sh
|
Shell
|
mit
| 791 |
#!/bin/bash
# install dotfiles
DOT_FILES=( ansible.cfg .ctags .gemrc .gitconfig .gitignore .gitmessage.txt .pryrc .rubocop.yml .tigrc .tmux.conf .vimrc .vimrc.neobundle .zshenv .zshrc .zprofile)
for file in ${DOT_FILES[@]}
do
ln -s $HOME/dotfiles/$file $HOME/
done
# install bin for tmux
BIN_FILES=( battery )
for file in ${BIN_FILES[@]}
do
ln -s $HOME/dotfiles/$file /usr/local/bin/
done
# install $HOME/.vim/after/plugin/common-settings.vim
[ ! -d $HOME/.vim/after/plugin ] && mkdir -p $HOME/.vim/after/plugin && ln -s $HOME/dotfiles/.vim/after/plugin/common-settings.vim $HOME/.vim/after/plugin/
# setup Neovim settings
[ ! -d ~/.config/nvim ] && mkdir -p ~/.config/nvim
NEOVIM_FILES=( dein.toml deinlazy.toml init.vim mapping.vim options.vim plugins.vim )
for file in ${NEOVIM_FILES[@]}
do
ln -s $HOME/dotfiles/nvim/$file $HOME/.config/nvim/
done
|
shifumin/setupfiles
|
setup_dotfiles.sh
|
Shell
|
mit
| 868 |
#!/bin/bash
# Copyright 2010-2013 Matus Chochlik. Distributed under the Boost
# Software License, Version 1.0. (See accompanying file
# LICENSE_1_0.txt or copy at http://www.boost.org/LICENSE_1_0.txt)
#
exe_path=${1}
lib_name=${2:-libGL.so}
lib_hdr=${3:-$(dirname ${0})/../third_party/include/GL/glcorearb.h}
if [ ${#exe_path} -eq 0 ]
then echo "Usage: $(basename $0) <path-to-executable>" && exit 1
fi
if [ ! -x ${exe_path} ]
then echo "Error: ${exe_path} is not an executable" && exit 1
fi
lib_path=$(
ldd ${exe_path} |
grep -e "${lib_name}" |
while read name sep path rest
do echo ${path}
done
)
if [ ${#lib_path} -eq 0 ]
then echo "Error: Executable does not link to ${lib_name}" && exit 1
fi
if [ ! -f "${lib_path}" ]
then echo "Error: File ${lib_path} not found" && exit 1
fi
if [ -h "${lib_path}" ]
then lib_path="$(readlink -e ${lib_path})"
fi
tmp_file=$(mktemp)
ltrace --demangle --library "${lib_path}" "${exe_path}" 2> "${tmp_file}" > /dev/null &
exe_pid=$!
sleep 3
kill ${exe_pid}
cut -d'(' -f1 "${tmp_file}" |
uniq | sort | uniq |
grep -e '^gl' |
while read gl_sym
do $(dirname $0)/_get_gl_sym_ver.sh "${gl_sym}" ${lib_hdr} #| grep "${gl_sym}:"
done #|
#sed -n 's/^.*GL_VERSION_\([1-9]_[0-9]\).*$/\1/p' |
#uniq | sort | uniq |
#tail -1
rm -f ${tmp_file}
|
vif/3D-STG
|
ThirdParty/oglplus-develop/tools/_get_exe_gl_reqs.sh
|
Shell
|
mit
| 1,282 |
#!/usr/bin/env bash
CODE_PATH=${CODE_PATH:-/home/onur/projects/research/focus/ner-tagger-tensorflow}
EXP_NAME=${1:-default_exp_name}
GPU=${2:-0}
echo 'cd '${CODE_PATH}' && source /usr/local/bin/virtualenvwrapper.sh && workon dynet && source environment-variables && python control_experiments.py -m joint_ner_and_md with integration_mode=0 dynet_gpu='$GPU' embeddings_filepath="" word_lstm_dim=256 experiment_name='$EXP_NAME
echo 'cd '${CODE_PATH}' && source /usr/local/bin/virtualenvwrapper.sh && workon dynet && source environment-variables && python control_experiments.py -m joint_ner_and_md with integration_mode=1 dynet_gpu='$GPU' embeddings_filepath="" word_lstm_dim=256 experiment_name='$EXP_NAME
echo 'cd '${CODE_PATH}' && source /usr/local/bin/virtualenvwrapper.sh && workon dynet && source environment-variables && python control_experiments.py -m joint_ner_and_md with integration_mode=2 dynet_gpu='$GPU' embeddings_filepath="" word_lstm_dim=256 experiment_name='$EXP_NAME
|
onurgu/ner-tagger-tensorflow
|
scripts/run-configurations-for-three-integration_modes.sh
|
Shell
|
mit
| 987 |
#!/bin/bash
sed -i 's/"psr-4": {/"psr-4": { "Padosoft\\\\Composer\\\\Test\\\\": ".\/vendor\/padosoft\/composer\/tests\/",/g' ./composer.json
|
alevento/composer
|
tests/config/sedCommand.sh
|
Shell
|
mit
| 140 |
#!/bin/bash
xinput set-prop "ETPS/2 Elantech Touchpad" "libinput Tapping Enabled" 1
xinput set-prop "ETPS/2 Elantech Touchpad" 294 0
|
krystianbajno/scripts
|
battery/tap.sh
|
Shell
|
mit
| 133 |
#!/bin/bash
rm src/*
tar -zxf src.tgz
for n in 1 2 3 4 5 6 7 8 9 A B C; do
rm "Disk${n}"/* "Disk${n}.img"
mv "src/DISK${n}" "Disk${n}"
dd if=/dev/zero of="Disk${n}.img" bs=512 count=2880
mformat -i "Disk${n}.img" -f 1440
done
echo -n>filelist.txt
echo -n>failed.txt
cd ./src
ls|sed 's/\._$//g'|sed 's/_$//g'|while read filename; do
grep -i -o ".:$filename" SETUP.INF|uniq|tr 'a-z' 'A-Z'>>../filelist.txt
grep -i -o ".:$filename" CONTROL.INF|uniq|tr 'a-z' 'A-Z'>>../filelist.txt
done
cd ..
cat filelist.txt|sort|uniq|while read info;do
idx=${info%%:*}
fname=${info#*:}
mv src/${fname}* "Disk${idx}" -i||echo $idx $fname>>failed.txt
done
mv src/* Disk1
for n in 1 2 3 4 5 6 7 8 9 A B C; do
mcopy -i "Disk${n}.img" "Disk${n}"/* ::/
done
|
frank-deng/retro-works
|
misc/processWin31Setup.sh
|
Shell
|
mit
| 745 |
#!/bin/bash
my_dir="$(dirname "$0")"
source $my_dir/config.sh
if [[ $wd == "" ]]; then
echo "Please specify working dir in config.sh"
exit 1
fi
# Make new dir
outputDirName="output $(date "+%Y-%m-%d %H-%M-%S")"
mkdir "$outputDirName"
function async_collect {
echo "-- $1 - Collecting..."
output=`rsync -q "$username@$1:$wd/output.log" "$outputDirName/$1.log" 2>&1`
if [[ $output == "" ]]; then
echo "-- $1 - Success"
else
echo -e "-- $1 - Error\n$output"
fi
}
while read host; do
if [[ $host =~ ^#.* ]] || [[ $host == '' ]]; then
continue
fi
async_collect $host &
done < nodes.txt
# Wait for all processes to finish
wait
|
kabieror/planetlab-scripts
|
collect-output.sh
|
Shell
|
mit
| 661 |
echo
echo "Installing Android tools"
brew install --cask android-studio
brew install --cask openmtp # official "Android File Transfer" app for macOS from Google comes with bugs
brew install --cask jd-gui
brew install apktool
brew install dex2jar
brew install jadx
brew install scrcpy
brew install --cask android-platform-tools
|
filipmaelbrancke/mac-install
|
scripts/android.sh
|
Shell
|
mit
| 327 |
#!/bin/bash -e
echo "Doing merge"
echo "I'm running as user $USER in dir $PWD"
CLI="node ${PWD}/cli.js"
jobData=( $($CLI -q '$.job.name' -q '$.job.id' -q '$.job.baseline.content[?(@.name === "commits")].id[-1:]' --format values load_file ./data.json) )
echo Job name: ${jobData[0]}
jobId=${jobData[1]}
echo Job id: $jobId
revision=${jobData[2]}
echo I will merge revision $revision
res=( $($CLI -q '$.repository' -q '$.patches[-1:].change.newrev' -q '$.patches[-1:].change.refname' --format values read_type coderepo.revision $revision) )
repositoryId=${res[0]}
commit=${res[1]}
refname=${res[2]}
changeAndPatch=$(echo $refname|cut -d'/' -f4-|tr / ,)
echo "I will add code-review +2 to change $changeAndPatch"
ssh -p 29418 $USER@localhost gerrit review $changeAndPatch --code-review '+2'
$CLI -v --format jsonPretty merge_revision $revision
echo "Merge done"
|
Combitech/codefarm
|
src/scripts/jobs/merge_revision.sh
|
Shell
|
mit
| 865 |
# src/bash/pgsql-runner/funcs/print-help.help.sh
# v1.0.9
# ---------------------------------------------------------
# todo: add doHelpPrintHelp comments ...
# ---------------------------------------------------------
doHelpPrintHelp(){
doLog "DEBUG START doHelpPrintHelp"
cat doc/txt/pgsql-runner/helps/print-help.help.txt
sleep 2
# add your action implementation code here ...
doLog "DEBUG STOP doHelpPrintHelp"
}
# eof func doHelpPrintHelp
# eof file: src/bash/pgsql-runner/funcs/print-help.help.sh
|
YordanGeorgiev/pgsql-runner
|
src/bash/pgsql-runner/helps/print-help.help.sh
|
Shell
|
mit
| 517 |
echo "This guide will install redis v2.8.19 to your system"
# Update system
sudo apt-get update
sudo apt-get install build-essential
sudo apt-get install tcl8.5
# Install redis
# Download source google code
wget http://download.redis.io/releases/redis-2.8.19.tar.gz
tar xzf redis-2.8.19.tar.gz
cd redis-2.8.19
make
make test
sudo make install
cd utils
sudo ./install_server.sh
|
indrasantosa/common-shell-ubuntu
|
datastore/redis.sh
|
Shell
|
mit
| 379 |
#!/bin/sh
PATH=/usr/local/sbin:/usr/sbin:/sbin:/usr/local/bin:/usr/bin:/bin
export PATH
cd /home/vixie/work/yeti-dm || exit 1
yeticonf_dm="/home/vixie/work/yeticonf/dm"
(cd $yeticonf_dm; git pull) 2>&1 | grep -v 'Already up-to-date.'
# this is F-root
iana_server="2001:500:2f::f"
#
# first, fetch the iana zone, and decide whether it has changed
#
dig @$iana_server +noidnout +onesoa +nocmd +nsid +nostats . axfr > iana-root.dns
if dnssec-verify -o . iana-root.dns > dnssec-verify.out 2>&1; then
:
else
cat dnssec-verify.out
traceroute6 -q1 $iana_server
exit 1
fi
if [ ! -s iana-root.dns ]; then
echo 'zero length or missing zone file from iana?' >&2
exit 1
fi
reality=$(awk '$3 = "SOA" { print $7; exit }' iana-root.dns)
policy=$(cat $yeticonf_dm/ns/iana-start-serial.txt)
if [ $reality -ge $policy ]; then
new_yaml=1
if [ -e yeti-root-servers.yaml ]; then
if cmp -s $yeticonf_dm/ns/yeti-root-servers.yaml \
yeti_root-servers.yaml; then
new_yaml=0
fi
fi
if [ $new_yaml -ne 0 ]; then
rm -f yeti-root-servers.yaml
cp $yeticonf_dm/ns/yeti-root-servers.yaml .
fi
fi
new_zone=1
if [ -e iana-root.dns.old ]; then
if cmp -s iana-root.dns iana-root.dns.old; then
new_zone=0
fi
fi
if [ $new_zone -ne 0 ]; then
rm -f iana-root.dns.old
cp iana-root.dns iana-root.dns.old
fi
#
# second, remake the conf-include file (allow-transfer, also-notify)
#
new_inc=0
if [ $reality -ge $policy ]; then
new_inc=1
if perl scripts/yeti-mkinc.pl; then
:
else
echo 'yeti-mkinc failed' >&2
exit 1
fi
if [ -e named.yeti.inc.old ]; then
if cmp -s named.yeti.inc named.yeti.inc.old; then
new_inc=0
fi
fi
if [ $new_inc -ne 0 ]; then
rndc -s yeti-dm reconfig
rm -f named.yeti.inc.old
cp named.yeti.inc named.yeti.inc.old
fi
fi
#
# third, if new zone, create the yeti zone based on the iana zone, and sign it
#
if [ $new_zone -ne 0 ]; then
keys=$(perl scripts/yeti-mkdns.pl)
if [ $? -ne 0 ]; then
echo 'yeti-mkdns failed' >&2
exit 1
fi
if dnssec-signzone -Q -R -o . -x -s now-1h -e now+167h \
yeti-root.dns $keys \
> dnssec-signzone.out 2>&1
then
rndc -s yeti-dm reload . 2>&1 \
| grep -v 'zone reload up-to-date'
else
cat dnssec-signzone.out
exit 1
fi
fi
exit
|
BII-Lab/Yeti-Project
|
script/TISF/cronrun-often.sh
|
Shell
|
mit
| 2,223 |
# os.bash
#
# Platform detection and OS functions.
os.platform() {
case "$(uname -rs)" in
CYGWIN*)
echo cygwin
;;
*WSL2|*microsoft-standard)
echo wsl2
;;
*Microsoft)
echo wsl1
;;
Darwin*)
echo osx
;;
FreeBSD*)
echo freebsd
;;
Linux*)
echo linux
;;
esac
}
|
ellipsis/ellipsis
|
src/os.bash
|
Shell
|
mit
| 456 |
#!/bin/bash
if [ "$NODE_ENV" = "circleci" ]; then
echo "> Starting api server"
cd ~/cache/opencollective-api
PG_DATABASE=opencollective_dvl npm start &
API_PID=$!
cd -
echo "> Starting frontend server"
npm start &
FRONTEND_PID=$!
# Record video and upload them if test fail on CI
CYPRESS_CONFIG="video=true,videoUploadOnPasses=true"
CYPRESS_RECORD="--record"
else
# Never record video in dev
CYPRESS_CONFIG="video=false"
CYPRESS_RECORD=""
fi
echo ""
echo "> Starting server jest tests"
jest test/server/*
RETURN_CODE=$?
if [ $RETURN_CODE -ne 0 ]; then
echo "Error with jest tests, exiting"
exit 1;
fi
echo ""
echo "> Ensure cypress binary is installed (should normally be cached)"
cypress install
echo "> Running cypress tests"
cypress run ${CYPRESS_RECORD} --config ${CYPRESS_CONFIG}
RETURN_CODE=$?
if [ $RETURN_CODE -ne 0 ]; then
echo "Error with cypress e2e tests, exiting"
exit 1;
fi
echo ""
if [ "$NODE_ENV" = "circleci" ]; then
echo "Killing all node processes"
kill $API_PID;
kill $FRONTEND_PID;
echo "Exiting with code $RETURN_CODE"
exit $RETURN_CODE
fi
|
OpenCollective/frontend
|
scripts/run_e2e_tests.sh
|
Shell
|
mit
| 1,111 |
echo "postrm"
# not sure what this does...
%systemd_postun_with_restart hello.service
|
mh-cbon/go-bin-rpm
|
demo/rpm/postrm.sh
|
Shell
|
mit
| 87 |
#!/bin/sh
# CYBERWATCH SAS - 2017
#
# Security fix for CESA-2014:1148
#
# Security announcement date: 2014-09-04 00:18:56 UTC
# Script generation date: 2017-01-01 21:11:11 UTC
#
# Operating System: CentOS 5
# Architecture: x86_64
#
# Vulnerable packages fix on version:
# - squid.x86_64:2.6.STABLE21-7.el5_10
#
# Last versions recommanded by security team:
# - squid.x86_64:2.6.STABLE21-7.el5_10
#
# CVE List:
# - CVE-2013-4115
# - CVE-2014-3609
#
# More details:
# - https://www.cyberwatch.fr/vulnerabilites
#
# Licence: Released under The MIT License (MIT), See LICENSE FILE
sudo yum install squid.x86_64-2.6.STABLE21 -y
|
Cyberwatch/cbw-security-fixes
|
CentOS_5/x86_64/2014/CESA-2014:1148.sh
|
Shell
|
mit
| 638 |
make clean 2>&1 >/dev/null
rm -f matcher
echo "compiling..."
if ! make CFLAGS="-ftest-coverage -fprofile-arcs -DDEBUG_OPT -DFLOATEVAL" 2>/dev/null >/dev/null;
then
echo "compile failed"
exit 1
fi
IFS='
'
for line in `cat sanitychecks.txt | grep -v '^#'`
do
echo CHECK $line
if ! echo $line | (./matcher 2>&1);
then
echo "------------------"
echo "SANITY CHECK FAILED"
exit 1
fi
echo "......................"
done
echo "all tests happy :D"
|
bl0ckeduser/symdiff
|
sanitycheck.sh
|
Shell
|
mit
| 454 |
../loadClassificationResults -dropAll bioInt /data2/topmodels/CCLEdrugPredictions/results.ra
../loadClassificationResults bioInt /data2/topmodels/CCLEdrugPredictions2/results.ra
../loadClassificationResults bioInt /data2/topmodels/CCLEdrugPredictions3/results.ra
../loadClassificationResults bioInt /data2/topmodels/LGG_survival/results.ra
../loadClassificationResults bioInt /data2/topmodels/expressionBvL_80_20/results.ra
../loadClassificationResults bioInt /data2/topmodels/expressionBvL_80_20_2/results.ra
../loadClassificationResults bioInt /data2/topmodels/expressionLumAvLumB_80_20/results.ra
../loadClassificationResults bioInt /data2/topmodels/expressionLumAvLumB_80_20_2/results.ra
#../loadClassificationResults bioInt /data2/topmodels/paradigmBvL_80_20/results.ra
../loadClassificationResults bioInt /data2/topmodels/paradigmLumAvLumB_80_20/results.ra
../loadClassificationResults bioInt /data2/topmodels/gclDrugPredictions_run1/results.ra
../loadClassificationResults bioInt /data2/topmodels/gclDrugPredictions_run2/results.ra
##########OLD HIVE BUILD########
##../loadClassificationResults -dropAll bioInt /hive/users/cszeto/TCGAcrossCancer1.0/Ba_V_Lu/results.ra
##../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/Ba_V_Lu_80-20/results.ra
##../loadClassificationResults -dropAll bioInt /hive/users/cszeto/TCGAcrossCancer1.0/OV_platinumSensitivity/results.ra
##../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/GBM_survival/results.ra
##../loadClassificationResults bioInt /hive/users/cszeto/GeneExpressionAtlasMesVgbm/results.ra
#../loadClassificationResults -dropAll bioInt /hive/users/cszeto/CCLEdrugPredictions/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/CCLEdrugPredictions2/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/CCLEdrugPredictions3/results.ra
##../loadClassificationResults bioInt /hive/users/cszeto/6n6predictions/untreatedVlowdose/results.ra
##../loadClassificationResults bioInt /hive/users/cszeto/6n6predictions/untreatedVhighdose/results.ra
##../loadClassificationResults bioInt /hive/users/cszeto/6n6predictions/untreatedVsurvivor/results.ra
##../loadClassificationResults bioInt /hive/users/cszeto/6n6predictions/lowdoseVhighdose/results.ra
##../loadClassificationResults bioInt /hive/users/cszeto/6n6predictions/lowdoseVsurvivor/results.ra
##../loadClassificationResults bioInt /hive/users/cszeto/6n6predictions/highdoseVsurvivor/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/OV_platinumFreeInterval/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/paradigmBvL_80_20/results.ra
##../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/paradigmIvM_80_20/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/paradigmIPvDM_80_20/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/paradigmSvL_80_20/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/expressionBvL_80_20/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/expressionBvL_80_20_2/results.ra
##../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/expressionIvM_80_20/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/expressionIPvDM_80_20/results.ra
##../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/expressionIPvDM_80_20_2/results.ra
##../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/expressionSvL_80_20/results.ra
##../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/expressionSvL_80_20_2/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/expressionBRCAOV_BvL_80_20/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/expressionBRCAOV_BvL_80_20_2/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/expressionCvN_80_20/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/expressionCvN_80_20_2/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/expressionLumAvLumB_80_20/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/paradigmCvN_80_20/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/paradigmLumAvLumB/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/paradigmBRCAOV_BvL_80_20/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/expressionBRCAOVLUSC_BvL_80_20/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/expressionBRCAOVLUSC_BvL_80_20_2/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/prostatePrimaryVsMet/topmodel/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/prostatePrimaryVsMet/copyNumberTopModel/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/prostatePrimaryVsMet/integratedTopModel/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/LGG_survival/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/LGG_survival_excludeCluster4/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/LGG_cluster1n2n4v3n5/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/LGG_cluster1n2v3n5/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/LGG_cluster1v5/results.ra
#../loadClassificationResults bioInt /hive/users/cszeto/TCGAcrossCancer1.0/LGG_cluster2v3/results.ra
|
christopherszeto/hgClassifications
|
hgClassificationsViewer/hgClassificationsData/cancer2/defaults.sh
|
Shell
|
mit
| 5,806 |
#!/bin/sh
# If a command fails then the deploy stops
set -e
printf "\033[0;32mDeploying updates to GitHub...\033[0m\n"
# Clear public directory
rm -rf public
# Build the project.
hugo -t cactus
# Add changes to git.
git add .
# Commit changes.
msg="Rebuilding site $(date)"
if [ -n "$*" ]; then
msg="$*"
fi
git commit -m "$msg"
# Push source and build repos.
git push origin master
|
imryan/imryan.github.io
|
deploy.sh
|
Shell
|
mit
| 390 |
#!/usr/bin/env bash
#Run the Script from the folder you are in...
CURRENT_DIR=$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )
pdflatex "$CURRENT_DIR/thesis_main.tex"
RETVAL="$?"
if [[ "${RETVAL}" -ne 0 ]] ; then
echo "First pdflatex run failed"
exit ${RETVAL}
fi
makeindex thesis_main.nlo -s nomencl.ist -o thesis_main.nls
RETVAL="$?"
if [[ "${RETVAL}" -ne 0 ]] ; then
echo "makeindex run failed"
exit ${RETVAL}
fi
biber "$CURRENT_DIR/thesis_main"
RETVAL="$?"
if [[ "${RETVAL}" -ne 0 ]] ; then
echo "biber run failed"
exit ${RETVAL}
fi
pdflatex "$CURRENT_DIR/thesis_main.tex"
RETVAL="$?"
if [[ "${RETVAL}" -ne 0 ]] ; then
echo "Second pdflatex run failed"
exit ${RETVAL}
fi
pdflatex "$CURRENT_DIR/thesis_main.tex"
RETVAL="$?"
if [[ "${RETVAL}" -ne 0 ]] ; then
echo "Third pdflatex run failed"
exit ${RETVAL}
fi
rm *.bbl > /dev/null
rm *.blg > /dev/null
rm *.aux > /dev/null
rm *.bcf > /dev/null
rm *.ilg > /dev/null
rm *.lof > /dev/null
rm *.log > /dev/null
rm *.nlo > /dev/null
rm *.nls* > /dev/null
rm *.out > /dev/null
rm *.toc > /dev/null
rm *.run.xml > /dev/null
echo "PDF Compile: Success"
exit 0
|
koep/FOM-LaTeX-Template
|
compile.sh
|
Shell
|
mit
| 1,154 |
#!/usr/bin/env bash
problems=0
total=0
for file in `find ./src -name "*.js" -or -name "*.jsx"`
do
total=$((total+1))
if [[ `head -1 $file` != "// @flow" ]];
then
echo "missing '// @flow' in $file"
problems=$((problems+1))
fi
done
if [[ "$problems" == 1 ]]; then
echo "$problems of $total files is unchecked by flow"
exit 1
elif [[ "$problems" -gt 1 ]]; then
echo "$problems of $total files are unchecked by flow"
exit 1
else
echo "$total of $total files are checked by flow"
exit 0
fi
|
coreyflynn/jubilation
|
scripts/flow-check.sh
|
Shell
|
mit
| 518 |
#!/usr/bin/env bash
NUMBER_OF_APP="$(jq ". | length" backing/config-backing.json)"
for i in `seq 1 $NUMBER_OF_APP`
do
REGX_NAME=".["$i-1"] | .name"
REGX_PORT=".["$i-1"] | .port"
MS_PORT="$(jq "$REGX_PORT" backing/config-backing.json | tr -d '/"')"
PORT_MS_NAME="$(jq "$REGX_NAME" backing/config-backing.json | tr -d '/"')_PORT"
export $PORT_MS_NAME=$MS_PORT
REGX_HOST=".["$i-1"] | .host"
MS_HOST="$(jq "$REGX_HOST" backing/config-backing.json | tr -d '/"')"
HOST_MS_NAME="$(jq "$REGX_NAME" backing/config-backing.json | tr -d '/"')_HOST"
export $HOST_MS_NAME=$MS_HOST
REGX_URL=".["$i-1"] | .url"
MS_URL="$(jq "$REGX_URL" backing/config-backing.json | sed 's:^.\(.*\).$:\1:')"
URL_MS_NAME="$(jq "$REGX_NAME" backing/config-backing.json | tr -d '/"')_URL"
export $URL_MS_NAME=$MS_URL
REGX_PASS=".["$i-1"] | .password"
MS_PASS="$(jq "$REGX_PASS" backing/config-backing.json | tr -d '/"')"
PASS_MS_NAME="$(jq "$REGX_NAME" backing/config-backing.json | tr -d '/"')_PASSWORD"
export $PASS_MS_NAME=$MS_PASS
# REGX_URL=".["$i-1"] | .url"
# MS_URL="$(jq "$REGX_URL" backing/config-backing.json | tr -d '/"')"
# URL_MS_NAME="$(jq "$REGX_NAME" backing/config-backing.json | tr -d '/"')_URL"
# export $URL_MS_NAME=$MS_URL
# echo $MS_URL
done
|
OElabed/ice-microservices
|
profiles/dev/backing/export-backing.sh
|
Shell
|
mit
| 1,330 |
#!/bin/sh
# CYBERWATCH SAS - 2017
#
# Security fix for DLA-44-1
#
# Security announcement date: 2014-09-03 00:00:00 UTC
# Script generation date: 2017-01-01 21:08:48 UTC
#
# Operating System: Debian 6 (Squeeze)
# Architecture: i386
#
# Vulnerable packages fix on version:
# - libwpd:0.8.14-1+deb6u1
#
# Last versions recommanded by security team:
# - libwpd:0.8.14-1+deb6u1
#
# CVE List:
#
# More details:
# - https://www.cyberwatch.fr/vulnerabilites
#
# Licence: Released under The MIT License (MIT), See LICENSE FILE
sudo apt-get install --only-upgrade libwpd=0.8.14-1+deb6u1 -y
|
Cyberwatch/cbw-security-fixes
|
Debian_6_(Squeeze)/i386/2014/DLA-44-1.sh
|
Shell
|
mit
| 591 |
#!/bin/bash
###################################################################
## This is a template file for new examples. It explains how to ##
## check for various things. ##
## ##
## An example script should exit with code 0 if the test passes, ##
## and with some other code if the test fails. ##
###################################################################
##########################################################
# Various options that must be updated for each example
N="40"
EXAMPLE_DIRECTORY="example_$N"
EXAMPLE_INPUT="example_$N.v"
EXAMPLE_OUTPUT="bug_$N.v"
EXTRA_ARGS=("$@")
##########################################################
# Get the directory name of this script, and `cd` to that directory
DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
cd "$DIR/$EXAMPLE_DIRECTORY"
FIND_BUG_PY="$(cd "$DIR/.." && pwd)/find-bug.py"
# Initialize common settings like the version of python
. "$DIR/init-settings.sh"
ABS_PATH="$(${PYTHON} -c 'import os.path; print(os.path.abspath("."))')"
# Set up bash to be verbose about displaying the commands run
PS4='$ '
set -x
# Disable parallel make in subcalls to the bug minimizer because it screws with things
. "$DIR/disable-parallel-make.sh"
######################################################################
# Create the output file (to normalize the number of "yes"es needed),
# and run the script only up to the request for the regular
# expression; then test that the output is as expected.
#
# If you don't need to test the output of the initial requests, feel
# free to remove this section.
#
# Note that the -top argument only appears in Coq >= 8.4
#
# Note also that the line numbers tend to be one larger in old
# versions of Coq (<= 8.6?)
EXPECTED_ERROR=$(cat <<EOF
This file produces the following output when Coq'ed:
Set
: Type
File "/tmp/tmp[A-Za-z0-9_/]\+\.v", line 1[0-9], characters 0-15:
Error: The command has not failed\s\?!
EOF
)
# pre-build the files to normalize the output for the run we're testing
find "$DIR/example_$N" \( -name "*.vo" -o -name "*.glob" \) -delete
echo "y" | ${PYTHON} "$FIND_BUG_PY" "$EXAMPLE_INPUT" "$EXAMPLE_OUTPUT" "${EXTRA_ARGS[@]}" 2>/dev/null >/dev/null
# kludge: create the .glob file so we don't run the makefile
touch "${EXAMPLE_OUTPUT%%.v}.glob"
ACTUAL_PRE="$((echo "y"; echo "y") | ${PYTHON} "$FIND_BUG_PY" "$EXAMPLE_INPUT" "$EXAMPLE_OUTPUT" "${EXTRA_ARGS[@]}" -l - 2>&1)"
ACTUAL_PRE_ONE_LINE="$(echo "$ACTUAL_PRE" | tr '\n' '\1')"
TEST_FOR="$(echo "$EXPECTED_ERROR" | tr '\n' '\1')"
if [ "$(echo "$ACTUAL_PRE_ONE_LINE" | grep -c "$TEST_FOR")" -lt 1 ]
then
echo "Expected a string matching:"
echo "$EXPECTED_ERROR"
echo
echo
echo
echo "Actual:"
echo "$ACTUAL_PRE"
${PYTHON} "$DIR/prefix-grep.py" "$ACTUAL_PRE_ONE_LINE" "$TEST_FOR"
exit 1
fi
#########################################################################################################
#####################################################################
# Run the bug minimizer on this example; error if it fails to run
# correctly. Make sure you update the arguments, etc.
${PYTHON} "$FIND_BUG_PY" "$EXAMPLE_INPUT" "$EXAMPLE_OUTPUT" "${EXTRA_ARGS[@]}" || exit $?
######################################################################
# Put some segment that you expect to see in the file here. Or count
# the number of lines. Or make some other test. Or remove this block
# entirely if you don't care about the minimized file.
EXPECTED=$(cat <<EOF
(\* -\*- mode: coq; coq-prog-args: ("-emacs"\( "-w" "-deprecated-native-compiler-option,-native-compiler-disabled"\)\? "-R" "\." "Top"\( "-top" "example_[0-9]\+"\)\?\( "-native-compiler" "ondemand"\)\?) -\*- \*)
(\* File reduced by coq-bug-minimizer from original input, then from [0-9]\+ lines to [0-9]\+ lines, then from [0-9]\+ lines to [0-9]\+ lines \*)
(\* coqc version [^\*]*\*)
Fail Check Set\.
EOF
)
EXPECTED_ONE_LINE="$(echo "$EXPECTED" | grep -v '^$' | tr '\n' '\1')"
ACTUAL="$(cat "$EXAMPLE_OUTPUT" | grep -v '^$' | tr '\n' '\1')"
LINES="$(echo "$ACTUAL" | grep -c "$EXPECTED_ONE_LINE")"
if [ "$LINES" -ne 1 ]
then
echo "Expected a string matching:"
echo "$EXPECTED"
echo "Got:"
cat "$EXAMPLE_OUTPUT" | grep -v '^$'
${PYTHON} "$DIR/prefix-grep.py" "$ACTUAL" "$EXPECTED_ONE_LINE"
exit 1
fi
exit 0
|
JasonGross/coq-tools
|
examples/run-example-40.sh
|
Shell
|
mit
| 4,446 |
#!/bin/bash
gyp nkf.gyp --depth=. -f make --generator-output=./out
V=1 make -C out
cp out/out/Default/nkf.so ./
|
hnakamur/lua-nkf-native
|
build.sh
|
Shell
|
mit
| 112 |
#!/usr/bin/bash
#SBATCH --nodes 1 --ntasks 24 --mem 24G -p intel --time 3-0:00:00
#SBATCH --job-name=AntiSMASH
#SBATCH --output=AntiSMASH.%A_%a.log
CPUS=2
if [ $SLURM_CPUS_ON_NODE ]; then
CPUS=$SLURM_CPUS_ON_NODE
fi
GENBANK=gbk
EXT=gbk
N=1
if [ $1 ]; then
N=$1
elif [ ${SLURM_ARRAY_TASK_ID} ]; then
N=${SLURM_ARRAY_TASK_ID}
fi
if [ -f config.txt ]; then
source config.txt
else
echo "need config file to set some project-specific variables"
exit
fi
OUTDIR=secondary_metabolite
if [ ! -d $OUTDIR ]; then
mkdir -p $OUTDIR
fi
TOTAL=$(ls $GENBANK/*.${EXT} | wc -l)
if [ $N -gt $TOTAL ]; then
echo "Only $TOTAL files in folder $GENBANK, skipping $N"
exit
elif [[ $N == 0 ]]; then
echo "N must be between 1 and $TOTAL"
exit
fi
INFILE=$(ls $GENBANK/*.${EXT} | sed -n ${N}p)
echo "INFILE=$INFILE"
OUT=$OUTDIR/$(basename ${INFILE} .${EXT})
module unload perl
module unload perl
module load antismash/4.1.0
module unload python/3
source activate antismash
CPU=$SLURM_CPUS_ON_NODE
antismash --taxon fungi -c $CPUS --outputfolder $OUT --clusterblast --subclusterblast --smcogs --knownclusterblast \
--borderpredict --asf \
--full-hmmer --cassis --clusterblast --smcogs --subclusterblast --knownclusterblast $INFILE
|
stajichlab/Comparative_pipeline
|
pipeline/run_antismash.sh
|
Shell
|
mit
| 1,227 |
#!/usr/bin/env bash
set -e
version=${1?No version supplied}
echo "Stop application"
ssh [email protected] "sudo docker rm -f atm"
echo "Start application"
ssh [email protected] "sudo docker run -d -e REDIS_HOST=atm-redis.c156rq.0001.apse2.cache.amazonaws.com --name=atm -p 8080:8080 \"nicholasren/atm-service:$1\""
|
aconex-atm/atm-service
|
scripts/deploy.sh
|
Shell
|
mit
| 322 |
#!/usr/bin/env bash
#
# AJAlabs.com
#
# macOS Default - macOS Sierra 10.12 = 11.1
# v0.6 beta
#
# This is a customized version of ~/.macos — http://mths.be/macos
# Checkout http://secrets.blacktree.com for a extensive list of defaults
# Only defaults that have been tested to work with macOS 10.12 are enabled
# Exit unless host OS is macOS
if [ `uname -s` != "Darwin" ]; then
echo -e "\nThis script will only run on macOS"
echo "exiting"
exit 1
fi
# Ask for the administrator password upfront
sudo -v
# Keep-alive: update existing `sudo` time stamp until `macos-defaults.sh` has finished
while true; do sudo -n true; sleep 60; kill -0 "$$" || exit; done 2>/dev/null &
###############################################################################
# General UI/UX #
###############################################################################
# Set computer name (as done via System Preferences → Sharing)
echo -e "\nType the new Computer Name and press [enter]."
echo -e "or\nLeave blank and press [enter] to not modify the Computer Name."
read newName
if [ $newName ]; then
sudo scutil --set ComputerName "$newName"
sudo scutil --set HostName "$newName"
sudo scutil --set LocalHostName "$newName"
sudo defaults write /Library/Preferences/SystemConfiguration/com.apple.smb.server NetBIOSName -string "$newName"
fi
# Disable the sound effects on boot
sudo nvram SystemAudioVolume=" "
# Set standby delay to 24 hours (default is 1 hour)
sudo pmset -a standbydelay 86400
# Set sidebar icon size to medium
defaults write NSGlobalDomain NSTableViewDefaultSizeMode -int 2
# Always show scrollbars
defaults write NSGlobalDomain AppleShowScrollBars -string "Always"
# Automatically quit printer app once the print jobs complete
defaults write com.apple.print.PrintingPrefs "Quit When Finished" -bool true
###############################################################################
# SSD-specific tweaks #
###############################################################################
#NOTE: Disregard the warning generated on macOS 11.
# Disable the sudden motion sensor as it’s not useful for SSDs
sudo pmset -a sms 0
###############################################################################
# Trackpad, mouse, keyboard, and input #
###############################################################################
# Set a blazingly fast keyboard repeat rate
defaults write NSGlobalDomain KeyRepeat -int 1
# Set a the delay before starting the repeat rate
defaults write NSGlobalDomain InitialKeyRepeat -int 25
# Enable press-and-hold for key repeat
defaults write NSGlobalDomain ApplePressAndHoldEnabled -bool false
# Disable “natural” scrolling because it's stupid
defaults write NSGlobalDomain com.apple.swipescrolldirection -bool false
# Disable auto-correct
defaults write NSGlobalDomain NSAutomaticSpellingCorrectionEnabled -bool false
###############################################################################
# Screen #
###############################################################################
# Require password immediately after sleep or screen saver begins
defaults write com.apple.screensaver askForPassword -int 1
defaults write com.apple.screensaver askForPasswordDelay -int 0
# Create the Screenshots folder if it does not exist
mkdir -p "$HOME/Screenshots"
# Save screenshots to the ~/Screenshots folder
defaults write com.apple.screencapture location -string "$HOME/Screenshots"
###############################################################################
# Finder #
###############################################################################
# Finder: show hidden files by default
defaults write com.apple.finder AppleShowAllFiles -bool true
# Finder: show all filename extensions
defaults write NSGlobalDomain AppleShowAllExtensions -bool true
# Finder: show status bar
defaults write com.apple.finder ShowStatusBar -bool true
# Finder: allow text selection in Quick Look
defaults write com.apple.finder QLEnableTextSelection -bool true
# When performing a search, search the current folder by default
defaults write com.apple.finder FXDefaultSearchScope -string "SCcf"
# Disable the warning when changing a file extension
defaults write com.apple.finder FXEnableExtensionChangeWarning -bool false
# Use column view in all Finder windows by default
# Four-letter codes for the other view modes: `icnv`, `clmv`, `Flwv`
defaults write com.apple.finder FXPreferredViewStyle -string "clmv"
# Show the ~/Library folder
chflags nohidden ~/Library
# Avoid creating .DS_Store files on network volumes
defaults write com.apple.desktopservices DSDontWriteNetworkStores -bool true
###############################################################################
# Dock, Dashboard, and hot corners #
###############################################################################
# Disable Dashboard
defaults write com.apple.dashboard mcx-disabled -bool true
###############################################################################
# Safari & WebKit #
###############################################################################
# Set Safari’s home page to `about:blank` for faster loading
defaults write com.apple.Safari HomePage -string "about:blank"
# Prevent Safari from opening ‘safe’ files automatically after downloading
defaults write com.apple.Safari AutoOpenSafeDownloads -bool false
# Allow hitting the Backspace key to go to the previous page in history
defaults write com.apple.Safari com.apple.Safari.ContentPageGroupIdentifier.WebKit2BackspaceKeyNavigationEnabled -bool true
# Enable Safari’s debug menu
defaults write com.apple.Safari IncludeInternalDebugMenu -bool true
###############################################################################
# Terminal #
###############################################################################
# Only use UTF-8 in Terminal.app
defaults write com.apple.terminal StringEncodings -array 4
# Use a modified version of the Pro theme by default in Terminal.app
open "$HOME/.dotfiles/init/AJAlabs.terminal"
sleep 2 # Wait a bit to make sure the theme is loaded
defaults write com.apple.terminal "Default Window Settings" -string "AJAlabs"
defaults write com.apple.terminal "Startup Window Settings" -string "AJAlabs"
###############################################################################
# Disk Utility #
###############################################################################
# Enable the debug menu in Disk Utility
defaults write com.apple.DiskUtility DUDebugMenuEnabled -bool true
defaults write com.apple.DiskUtility advanced-image-options -bool true
###############################################################################
# Text Editing #
###############################################################################
# Disable Smart Dashes
defaults write -g NSAutomaticDashSubstitutionEnabled 0
# Disable Smart Quotes
defaults write -g NSAutomaticQuoteSubstitutionEnabled 0
###############################################################################
# TextMate 2.0 #
###############################################################################
# Enable Font Smoothing always on
defaults write com.macromates.TextMate.preview fontSmoothing 1
# Set font size to 13
#defaults write com.macromates.textmate OakTextViewNormalFontSize -int 13
# Set font to Monaco
#defaults write com.macromates.textmate OakTextViewNormalFontName -string "Monaco"
echo ""
echo "Oh dip! it worked! Restart/Log Out to apply the changes."
echo ""
|
AJ-Acevedo/dotfiles
|
init/macos-defaults.sh
|
Shell
|
mit
| 8,205 |
#!/usr/bin/env bash
# chrome-extension-search.sh
# Stefan Wuensch 2017-08-31
#
# In order to locate Chrome Extensions from only their ID,
# this generates a Google search URL from each Extension ID
# found in your Chrome Extensions folder.
#
# Why is this useful? One day all my Chrome Extensions disappeared.
# Poof! Gone.
# The only thing I had was a backup which showed the IDs such as
# "edacconmaakjimmfgnblocblbcdcpbko". Not useful if you want to
# figure out what it is to re-install it! This script at least
# makes it quick to search Google for that ID, and it very likely
# will get you a Chrome Store result.
#
# Optional: Supply an argument of an alternate directory to search.
# (This can be very useful if you are trying to look at a Time Machine
# backup and figure out which extensions you had at a certain date
# in the past.)
#
# Output: Basic HTML you can use to track down an Extension.
#
# Example output:
# <html>
# <a href="https://www.google.com/search?q=fhgenkpocbhhddlgkjnfghpjanffonno">https://www.google.com/search?q=fhgenkpocbhhddlgkjnfghpjanffonno</a> <br>
# <a href="https://www.google.com/search?q=jlmadbnpnnolpaljadgakjilggigioaj">https://www.google.com/search?q=jlmadbnpnnolpaljadgakjilggigioaj</a> <br>
# </html>
DIR="${HOME}/Library/Application Support/Google/Chrome/Default/Extensions"
[[ $# -eq 1 ]] && DIR="${1}"
cd "${DIR}" 2>/dev/null
[[ $? -ne 0 ]] && echo "Can't 'cd' to \"${DIR}\" - bailing out." && exit 1
echo "<html>"
ls | while read thing ; do
# Chrome Extension IDs apparently are always 32 characters
[[ ${#thing} -ne 32 ]] && >&2 echo "Skipping \"${thing}\" because it doesn't look like an Extension ID." && continue
url="https://www.google.com/search?q=${thing}"
echo "<a href=\"${url}\">${url}</a> <br>"
done
echo "</html>"
# fin
|
stefan-wuensch/UNIX-tools
|
chrome-extension-search.sh
|
Shell
|
mit
| 1,796 |
#!/bin/bash
######################################################
### Script for (semi)automatic Drupal Updates ###
### Author: https://github.com/fdellwing ###
### Date: 03.06.2019 ###
### Contact: [email protected] ###
######################################################
######################################################
### You may edit this values if they differ on ###
### your system. ###
######################################################
# The root path for your drupal installations
WWW_PATH="/var/www/"
# Database backup directory
DB_BACKUP_PATH="/root/drupal_update_db_back/"
# Log file directory
LOG_PATH="/var/log/"
# Drupal files owner (33=www-data)
OID=33
# Drupal files group (33=www-data)
GID=33
# Your systems MYSQL user settings
# If you do not use a debian based system,
# the file has to look like this:
# [client]
# host = localhost
# user = debian-sys-maint
# password = passphrase
# socket = /var/run/mysqld/mysqld.sock
CONF="/etc/mysql/debian.cnf"
######################################################
### Important functions used by the script ###
######################################################
function set_maintenance {
if [ "$D_VERSION" -eq 7 ]; then
# Set maintenance mode
drush @sites vset maintenance_mode 1 -y >> /dev/null 2>> "$LOG_PATH"drupal-up.log
# Clear the cache to make sure we are in maintenance
drush @sites cc all -y >> /dev/null 2>> "$LOG_PATH"drupal-up.log # clear cache
else
# Set maintenance mode
drush @sites sset system.maintenance_mode 1 -y >> /dev/null 2>> "$LOG_PATH"drupal-up.log
# Clear the cache to make sure we are in maintenance
drush @sites cr -y >> /dev/null 2>> "$LOG_PATH"drupal-up.log # clear cache
fi
}
function unset_maintenance {
if [ "$D_VERSION" -eq 7 ]; then
# Unset maintenance mode
drush @sites vset maintenance_mode 0 -y >> /dev/null 2>> "$LOG_PATH"drupal-up.log
# Clear the cache to make sure we are not in maintenance
drush @sites cc all -y >> /dev/null 2>> "$LOG_PATH"drupal-up.log # clear cache
else
# Unset maintenance mode
drush @sites sset system.maintenance_mode 0 -y >> /dev/null 2>> "$LOG_PATH"drupal-up.log
# Clear the cache to make sure we are not in maintenance
drush @sites cr -y >> /dev/null 2>> "$LOG_PATH"drupal-up.log # clear cache
fi
}
######################################################
### The main script starts here. ###
######################################################
# Display usage if no parameters are given
if [ -z "$1" ]; then
echo "Usage: ./drupal-up.sh <foldername or file>"
echo "Instead of a foldername, you can provide a file with foldernames"
# Run the program if exactly one parameter is given
elif [ -z "$2" ]; then
# Delete old db backups
find "$DB_BACKUP_PATH" -iname "*" -mtime +90 -delete 2> /dev/null || mkdir -p "$DB_BACKUP_PATH"
# Clear the logfiles from previous run
if [ ! -d "$LOG_PATH" ]; then
mkdir -p "$LOG_PATH"
fi
date >| "$LOG_PATH"drupal-mysql.log
date >| "$LOG_PATH"drupal-up.log
# Check if the given parameter is a directory in WWW_PATH
if [ -d "$WWW_PATH""$1" ]; then
drupale=( "$1" )
else
# If not, is it a file?
if [ -e "$1" ]; then
# Creates an array from the input file
drupale=()
while IFS=$'\n' read -r line; do drupale+=("$line"); done < <(cat "$1")
else
# If not, exit the script
echo "----------------------"
echo 'The given parameter is no existing directory or file.'
echo "----------------------"
exit 1
fi
fi
echo "----------------------"
echo 'Starting update for '"${#drupale[@]}"' instances.'
echo "----------------------"
for drupal in "${drupale[@]}"
do
# Get the databases from the drupal settings
datenbanken=()
while IFS=$'\n' read -r line; do datenbanken+=("$line"); done < <(grep -R -h -E "^[[:space:]]*'database' => '" "$WWW_PATH""$drupal"/sites/*/settings.php | grep -Po "(?<==> ').*(?=')")
TMP_PATH="$WWW_PATH""$drupal"
cd "$TMP_PATH" || exit 1
D_VERSION=$(drush @sites status -y --format=json 2> /dev/null | grep 'drupal-version' | grep -Eo '[0-9]+\.' | head -c 1)
echo "----------------------"
echo 'Starting update for '"$drupal"'.'
echo "----------------------"
set_maintenance
echo "----------------------"
echo 'Site(s) moved to maintenance mode.'
echo "----------------------"
echo "----------------------"
echo 'Starting '"${#datenbanken[@]}"' database backup(s).'
echo "----------------------"
# shellcheck disable=SC2034
i=1
# Create the DB backups
for db in "${datenbanken[@]}"
do
# Dump the database in in self contained file
# If the command fails, we need to stop or we can harm our drupal permanently
if mysqldump --defaults-extra-file="$CONF" --add-drop-table "$db" | gzip > "$DB_BACKUP_PATH""$db""_""$(date +'%Y_%m_%d')".sql.gz 2>> "$LOG_PATH"drupal-mysql.log; then
echo "----------------------"
echo 'Database backup successfully created ('"$i"'/'"${#datenbanken[@]}"').'
echo "----------------------"
else
echo "----------------------"
echo "Error while creating the database backup, please check the logfile \"$LOG_PATH""drupal-mysql.log\"."
echo "----------------------"
unset_maintenance
# If you are here, please read the log, because there is something wrong
exit 1
fi
((i++))
done
echo "----------------------"
echo 'Starting update of drupal.'
echo "----------------------"
# Do the drupal update
drush @sites rf -y >> /dev/null 2>> "$LOG_PATH"drupal-up.log
drush @sites up -y >> /dev/null 2>> "$LOG_PATH"drupal-up.log
echo "----------------------"
echo 'Finishing update of drupal.'
echo "----------------------"
# To be sure, do a DB update
drush @sites updatedb -y >> /dev/null 2>> "$LOG_PATH"drupal-up.log
# Set the correct owner
chown -R $OID:$GID "$TMP_PATH"
unset_maintenance
echo "----------------------"
echo 'Site(s) moved out of maintenance mode, please check the website(s).'
echo "----------------------"
done
# Clear error log from previous run
date >| "$LOG_PATH"drupal-up-error.log
# Put all the errors from the log to the error log
grep error "$LOG_PATH"drupal-up.log >> "$LOG_PATH"drupal-up-error.log
# Count the lines in error log >1 = there are errors
LINECOUNT=$(wc -l "$LOG_PATH"drupal-up-error.log | cut -f1 -d' ')
if [ "$LINECOUNT" -gt 1 ]; then
echo "----------------------"
echo 'All updates finished.'
echo "There are some errors, please check the logfile \"$LOG_PATH""drupal-up-error.log\"."
echo "----------------------"
else
echo "----------------------"
echo 'All updates finished.'
echo "----------------------"
fi
# Display usage if more than one parameter is given
else
echo "Usage: ./drupal-up.sh <foldername or file>"
echo "Instead of a foldername, you can provide a file with foldernames"
fi
|
fdellwing/drupal_up
|
drupal-up.sh
|
Shell
|
mit
| 6,953 |
#!/bin/sh
#
# Vivado(TM)
# runme.sh: a Vivado-generated Runs Script for UNIX
# Copyright 1986-2015 Xilinx, Inc. All Rights Reserved.
#
if [ -z "$PATH" ]; then
PATH=/opt/Xilinx/Vivado/2015.4/ids_lite/ISE/bin/lin64:/opt/Xilinx/Vivado/2015.4/bin
else
PATH=/opt/Xilinx/Vivado/2015.4/ids_lite/ISE/bin/lin64:/opt/Xilinx/Vivado/2015.4/bin:$PATH
fi
export PATH
if [ -z "$LD_LIBRARY_PATH" ]; then
LD_LIBRARY_PATH=/opt/Xilinx/Vivado/2015.4/ids_lite/ISE/lib/lin64
else
LD_LIBRARY_PATH=/opt/Xilinx/Vivado/2015.4/ids_lite/ISE/lib/lin64:$LD_LIBRARY_PATH
fi
export LD_LIBRARY_PATH
HD_PWD='/home/dries/Projects/Basys3/FPGA-Z/FPGA-Z.runs/impl_1'
cd "$HD_PWD"
HD_LOG=runme.log
/bin/touch $HD_LOG
ISEStep="./ISEWrap.sh"
EAStep()
{
$ISEStep $HD_LOG "$@" >> $HD_LOG 2>&1
if [ $? -ne 0 ]
then
exit
fi
}
# pre-commands:
/bin/touch .init_design.begin.rst
EAStep vivado -log top.vdi -applog -m64 -messageDb vivado.pb -mode batch -source top.tcl -notrace
|
dries007/Basys3
|
FPGA-Z/FPGA-Z.runs/impl_1/runme.sh
|
Shell
|
mit
| 977 |
#! /bin/bash/
# Install terraform
mkdir /tmp/terraform_installation
pushd /tmp/terraform_installation
# Remove any existing .zip files
find . -name "terraform_*linux_amd64*zip*" -delete
# Webscrape the dev's page for the URL of the latest version, and download it
curl --silent https://www.terraform.io/downloads.html |
grep -o 'https://releases.hashicorp.com/terraform/.*_linux_amd64.zip' |
xargs wget --quiet
# Install it -- by unzipping binaries
mkdir -p $HOME/opt/terraform
unzip terraform_*linux_amd64*zip -d $HOME/opt/terraform
# Copy the binary to $PATH. This may be specific to the way my dotfiles are
# set-up. The below looks for some mention of 'opt/terrafrom', and if it's not
# found, looks for the line 'export PATH' and inserts it above that.
if ! grep -Fxq 'opt/terraform' $HOME/.bash_profile; then
line=$(cat $HOME/.bash_profile | grep -n 'export PATH' | grep -o '^[0-9]*')
sed -i ${line}'i\# Add Terraform\nPATH=$PATH:$HOME/opt/terraform\n' \
$HOME/.bash_profile
fi
# Outta here
popd
|
brendan-R/dotfiles
|
os/install_terraform.sh
|
Shell
|
mit
| 1,028 |
#!/bin/tcsh
#
#$ -cwd
#$ -q ib1.q
#$ -N all_dekode_jobs
#$ -pe ib-hydra 8
date
module add mpich2-intel
module add software-2014
nohup python run_dekode_for.py
date
exit 0
|
albalu/dekode
|
submit_run_dekode.sh
|
Shell
|
mit
| 177 |
#!/bin/bash
TAG=$1
docker tag lammps/lammps:centos7 lammps/lammps:${TAG}_centos7_openmpi_py3
docker tag lammps/lammps:rockylinux8 lammps/lammps:${TAG}_rockylinux8_openmpi_py3
docker tag lammps/lammps:ubuntu18.04 lammps/lammps:${TAG}_ubuntu18.04_openmpi_py3
docker tag lammps/lammps:ubuntu20.04 lammps/lammps:${TAG}_ubuntu20.04_openmpi_py3
|
lammps/lammps-packages
|
docker/apply_tag.sh
|
Shell
|
mit
| 339 |
#!/bin/bash
yum install -y python-devel
pip install virtualenv
pip install virtualenvwrapper
echo "Configure virtualenvwrapper..."
cat >> /home/vagrant/.bashrc << EOF
export WORKON_HOME='/home/vagrant/venvs'
source /usr/bin/virtualenvwrapper.sh
EOF
|
LandRegistry/mint
|
provision.sh
|
Shell
|
mit
| 255 |
#!/bin/bash
echo 'Chapter number: '
read n
echo 'Chapter name: '
read m
mkdir CH$n-$m
cd CH$n-$m
mkdir images
sed -e "s/{NUMBER}/$n/" ../Template/Slides.tex > CH$n-Slides.tex
sed -e "s/{NUMBER}/$n/" ../Template/Handout.tex > CH$n-Handout.tex
sed -e "s/{NUMBER}/$n/" ../Template/CMakeLists.txt > CMakeLists.txt
cp ../Template/Content.tex CH$n-Content.tex
|
mvy/TC-INFO-ASR4-UPVM-YS
|
initiate.sh
|
Shell
|
mit
| 358 |
#!/bin/bash
while getopts "n:s:t:b:m:d:" opt; do
case "$opt" in
n)
name="${OPTARG}" ;;
s)
src="${OPTARG}" ;;
t)
target="${OPTARG}" ;;
b)
build="${OPTARG}" ;;
m)
mysrc="${OPTARG}" ;;
d)
ver="${OPTARG}" ;;
*)
usage ;;
esac
done
src="${src:-./$name}"
target="${target:-.}"
build="${build:-mysql_release}"
mysrc="${mysrc:-$target/mysql-$ver}"
target="$(readlink -e "$target")"
usage() {
echo "usage: $0 (-d <download mysql version> | -m <mysql source>) -n <plugin name> [-t <target> -b <build> -s <plugin source>]" >&2
exit 1
}
if [[ -z "$name" ]]; then
usage
fi
if [[ -z "$mysrc" ]]; then
echo "mysql source not exists"
if [[ -z "$ver" ]]; then
usage
fi
file="mysql-$ver.tar.gz"
if [[ ! -e "$file" ]]; then
wget "http://downloads.mysql.com/archives/get/file/$file"
fi
tar -xzvf "$file"
fi
if [[ ! -e "mysql-$ver/plugin/${name}" ]]; then
cp -r "$src" "mysql-$ver/plugin/${name}"
fi
cd "$mysrc"
if [[ ! -e plugin/${name}/${name}.so ]]; then
cmake . -DBUILD_CONFIG="${build}"
ncpu=$( grep "processor" /proc/cpuinfo | wc -l )
(( nproc=$ncpu*2 ))
make -j $nproc "${name}"
fi
my_ver=$(gawk -F'[()" ]+' '$1=="SET"&&$2=="CPACK_PACKAGE_FILE_NAME"{print $3}' "CPackConfig.cmake")
ver="${my_ver#*-}"
cp plugin/${name}/${name}.so "$target/${name}_${ver}.so"
|
xiezhenye/my-plugin-builder
|
plugin_builder.sh
|
Shell
|
mit
| 1,366 |
set -e
readonly NUMARGS=$#
readonly INFOLDER=$1
readonly OUTFOLDER=$2
usage() {
echo "USAGE: ./clone.sh base_image_folder out_folder"
}
makeandcopy() {
mkdir "$OUTFOLDER"
cp "$INFOLDER"/*-"$VMFILE"* "$OUTFOLDER"/
cp "$INFOLDER"/*.vmx "$OUTFOLDER"/
}
main() {
if [ $NUMARGS -le 1 ]
then
usage
exit 1
fi
if echo "$INFOLDER" | grep "[[:space:]]"
then
echo '$INFOLDER cannot contain spaces!'
exit 1
fi
if echo "$INFOLDER" | grep "/"
then
echo '$INFOLDER cannot contain slashes!'
exit 1
fi
VMFILE=`grep -E "(scsi|sata)0\:0\.fileName" "$INFOLDER"/*.vmx | grep -o "[0-9]\{6,6\}"`
if [ -z "$VMFILE" ]
then
echo "No $VMFILE found!"
exit 1
fi
makeandcopy
#reference snapshot
SNAPSHOT=`grep -o "[^\"]*.vmsn" "$INFOLDER"/*.vmx || (cd "$INFOLDER" && ls -r *.vmsn) | tail -1`
if [ -n "$SNAPSHOT" ]
then
sed -i -e '/checkpoint.vmState =/s/= .*/= "..\/'$INFOLDER'\/'$SNAPSHOT'"/' $OUTFOLDER/*.vmx
sed -i -e 's/checkpoint.vmState.readOnly = "FALSE"/checkpoint.vmState.readOnly = "TRUE"/' $OUTFOLDER/*.vmx
fi
local fullbasepath=$(readlink -f "$INFOLDER")/
cd "$OUTFOLDER"/
sed -i '/sched.swap.derivedName/d' ./*.vmx #delete swap file line, will be auto recreated
sed -i -e '/displayName =/ s/= .*/= "'$OUTFOLDER'"/' ./*.vmx #Change display name config value
local escapedpath=$(echo "$fullbasepath" | sed -e 's/[\/&]/\\&/g')
sed -i -e '/parentFileNameHint=/ s/="/="'"$escapedpath"'/' ./*-"$VMFILE".vmdk #change parent disk path
# Forces generation of new MAC + DHCP, I think.
sed -i '/ethernet0.generatedAddress/d' ./*.vmx
sed -i '/ethernet0.addressType/d' ./*.vmx
# Forces creation of a fresh UUID for the VM. Obviates the need for the line
# commented out below:
#echo 'answer.msg.uuid.altered="I copied it" ' >>./*.vmx
sed -i '/uuid.location/d' ./*.vmx
sed -i '/uuid.bios/d' ./*.vmx
# Things that ghetto-esxi-linked-clones.sh did that we might want. I can only guess at their use/value.
#sed -i '/scsi0:0.fileName/d' ${STORAGE_PATH}/$FINAL_VM_NAME/$FINAL_VM_NAME.vmx
#echo "scsi0:0.fileName = \"${STORAGE_PATH}/${GOLDEN_VM_NAME}/${VMDK_PATH}\"" >> ${STORAGE_PATH}/$FINAL_VM_NAME/$FINAL_VM_NAME.vmx
#sed -i 's/nvram = "'${GOLDEN_VM_NAME}.nvram'"/nvram = "'${FINAL_VM_NAME}.nvram'"/' ${STORAGE_PATH}/$FINAL_VM_NAME/$FINAL_VM_NAME.vmx
#sed -i 's/extendedConfigFile = "'${GOLDEN_VM_NAME}.vmxf'"/extendedConfigFile = "'${FINAL_VM_NAME}.vmxf'"/' ${STORAGE_PATH}/$FINAL_VM_NAME/$FINAL_VM_NAME.vmx
# delete machine id
sed -i '/machine.id/d' *.vmx
# add machine id
sed -i -e "\$amachine.id=$OUTFOLDER" *.vmx
# Register the machine so that it appears in vSphere.
FULL_PATH=`pwd`/*.vmx
VMID=`vim-cmd solo/registervm $FULL_PATH`
# Power on the machine.
vim-cmd vmsvc/power.on $VMID
}
main
|
pddenhar/esxi-linked-clone
|
clone.sh
|
Shell
|
mit
| 2,832 |
#!/bin/bash
vagrant provision master
vagrant ssh master -c "sudo salt \\* --state-output=mixed state.highstate"
|
JustinCarmony/fun-with-redis-2
|
bin/highstate.sh
|
Shell
|
mit
| 111 |
#!/bin/sh
wget -q -O - https://deb.nodesource.com/setup_6.x | bash -
|
leodutra/shell-scripts
|
environment/ubuntu-14-04/repository-setup/node-js.sh
|
Shell
|
mit
| 69 |
#!/bin/sh
# CYBERWATCH SAS - 2017
#
# Security fix for DSA-2910-1
#
# Security announcement date: 2014-04-18 00:00:00 UTC
# Script generation date: 2017-01-01 21:06:54 UTC
#
# Operating System: Debian 6 (Squeeze)
# Architecture: x86_64
#
# Vulnerable packages fix on version:
# - qemu-kvm:0.12.5+dfsg-5+squeeze11
#
# Last versions recommanded by security team:
# - qemu-kvm:0.12.5+dfsg-5+squeeze12
#
# CVE List:
# - CVE-2014-0150
#
# More details:
# - https://www.cyberwatch.fr/vulnerabilites
#
# Licence: Released under The MIT License (MIT), See LICENSE FILE
sudo apt-get install --only-upgrade qemu-kvm=0.12.5+dfsg-5+squeeze12 -y
|
Cyberwatch/cbw-security-fixes
|
Debian_6_(Squeeze)/x86_64/2014/DSA-2910-1.sh
|
Shell
|
mit
| 645 |
#!/bin/sh
_COMPOSER=$DIRECTORY"composer.phar"
_AUTOLOAD=$DIRECTORY"vendor/autoload.php"
if [ ! -z $DIRECTORY ]
then
if [ ! -f $_COMPOSER ]; then
curl -sS https://getcomposer.org/installer | php -- --install-dir=$DIRECTORY
fi
php $_COMPOSER install --dev --working-dir=$DIRECTORY
else
if [ ! -f $_COMPOSER ]; then
curl -sS https://getcomposer.org/installer | php
fi
php $_COMPOSER install --dev
fi
echo ""
echo ""
if [ -f $_AUTOLOAD ]; then
echo "-- The autoloader and all project dependencies have been installed --"
echo ""
fi
|
giovanniramos/PDO4You
|
install.sh
|
Shell
|
mit
| 550 |
julia -e "Base.compilecache(\"BinDeps\")" && \
julia -e "Base.compilecache(\"Cairo\")" && \
julia -e "Base.compilecache(\"Calculus\")" && \
julia -e "Base.compilecache(\"Clustering\")" && \
julia -e "Base.compilecache(\"Compose\")" && \
julia -e "Base.compilecache(\"DataArrays\")" && \
julia -e "Base.compilecache(\"DataFrames\")" && \
julia -e "Base.compilecache(\"DataFramesMeta\")" && \
julia -e "Base.compilecache(\"Dates\")" && \
julia -e "Base.compilecache(\"DecisionTree\")" && \
julia -e "Base.compilecache(\"Distributions\")" && \
julia -e "Base.compilecache(\"Distances\")" && \
julia -e "Base.compilecache(\"GLM\")" && \
julia -e "Base.compilecache(\"HDF5\")" && \
julia -e "Base.compilecache(\"HypothesisTests\")" && \
julia -e "Base.compilecache(\"JSON\")" && \
julia -e "Base.compilecache(\"KernelDensity\")" && \
julia -e "Base.compilecache(\"Loess\")" && \
#julia -e "Base.compilecache(\"Lora\")" && \
julia -e "Base.compilecache(\"MLBase\")" && \
julia -e "Base.compilecache(\"MultivariateStats\")" && \
julia -e "Base.compilecache(\"NMF\")" && \
julia -e "Base.compilecache(\"Optim\")" && \
julia -e "Base.compilecache(\"PDMats\")" && \
julia -e "Base.compilecache(\"RDatasets\")" && \
julia -e "Base.compilecache(\"SQLite\")" && \
julia -e "Base.compilecache(\"StatsBase\")" && \
julia -e "Base.compilecache(\"TextAnalysis\")" && \
julia -e "Base.compilecache(\"TimeSeries\")" && \
julia -e "Base.compilecache(\"ZipFile\")" && \
julia -e "Base.compilecache(\"Gadfly\")"
julia -e "Base.compilecache(\"MLBase\")" && \
julia -e "Base.compilecache(\"Clustering\")"
|
QinetiQ-datascience/Docker-Data-Science
|
Scripts/Julia/install_julia_pkgs_from_src.sh
|
Shell
|
mit
| 1,582 |
#!/bin/bash -eux
# codename of distro
LSB_RELEASE=$(lsb_release -sc)
# Prepare puppetlabs repo
wget http://apt.puppetlabs.com/puppetlabs-release-${LSB_RELEASE}.deb
dpkg -i puppetlabs-release-${LSB_RELEASE}.deb
apt-get -y update
# Install puppet/facter
apt-get -y install puppet facter
rm -f puppetlabs-release-${LSB_RELEASE}.deb
# Install standard modules
puppet module install puppetlabs-stdlib
|
uport/loopin
|
boxing/alphabox/packer/scripts/puppet.sh
|
Shell
|
mit
| 399 |
auto-format()
{
vim $@ +"argdo exec ':norm gg=G' | exec 'call maxmellon#remove_whitespace()'" +q!
}
|
MaxMEllon/.dotfiles
|
zsh/functions/auto-format.zsh
|
Shell
|
mit
| 102 |
#!/bin/bash
echo /opt/vc/lib > /etc/ld.so.conf
ldconfig
cp RPi_Cam_Web_Interface/bin/raspimjpeg /opt/vc/bin/
chmod 755 /opt/vc/bin/raspimjpeg
if [ ! -e /usr/bin/raspimjpeg ]; then
sudo ln -s /opt/vc/bin/raspimjpeg /usr/bin/raspimjpeg
fi
|
droogmic/rpi-cam-web-docker
|
setup/docker-setup.sh
|
Shell
|
mit
| 241 |
#!/bin/bash
db_name=$1
db_user=$2
osm_data_file=$3
echo "============ Multimodal graph builder ============"
echo "======== Step 1 of 10: Cleanup environment... ========"
mkdir -p tmp
mkdir -p bak
#rm csv/vertices.csv
#rm csv/edges.csv
#rm csv/car_parkings.csv
echo "======== done! ========"
# backup old database if it exists, or create a new one if not
echo "======== Step 2 of 10: Preparing database... ========"
if psql -lqt | cut -d \| -f 1 | grep -w $db_name; then
# database exists
pg_dump -h localhost -p 5432 -U $db_user -Fc -b -v -f "./bak/old_$db_name.backup" $db_name
else
# ruh-roh
createdb -O $db_user $db_name
psql -d $db_name -U $db_user -c "CREATE EXTENSION postgis;"
fi
echo "======== done! ========"
# create initial multimodal graph tables including
# modes, switch_types, edges, vertices and switch_points, populate initial data in
# modes and switch_types
echo "======== Step 3 of 10: Preparing multimodal graph tables in database ========"
psql -d $db_name -U $db_user -f prepare_graph_tables.sql
echo "==== Import modes data... ===="
psql -d $db_name -U $db_user -c "\COPY modes (mode_name,mode_id) FROM './csv/modes.csv' WITH CSV HEADER"
echo "==== done! ===="
echo "==== Import switch_types data... ===="
psql -d $db_name -U $db_user -c "\COPY switch_types (type_name,type_id) FROM './csv/switch_types.csv' WITH CSV HEADER"
echo "==== done! ===="
# import shapefiles with overriding the old geometry tables
echo "======== Step 4 of 10: Import OpenStreetMap data... ========"
osm2pgsql -s -l -c -d $db_name -p osm -U $db_user $osm_data_file
psql -d $db_name -U $db_user -f add_primary_key_to_osm_tables.sql
echo "======== done! ========"
echo "======== Step 5 of 10: Import UnitedMaps public transport and utilities data... ========"
for shp_file in ./shp/*.shp
do
echo "==== Importing $shp_file... ===="
shp2pgsql -d -s 4326 -W latin1 $shp_file | psql -h localhost -d $db_name -U $db_user
echo "==== done! ===="
done
echo "======== done! ========"
# generate multimodal graph edges and vertices in csv files
echo "======== Step 6 of 10: Build multimodal graph data in csv files... ========"
#python build_mmgraph.py $osm_data_file
tail -n +2 ./csv/public_transit_vertices.csv >> ./csv/vertices.csv
tail -n +2 ./csv/public_transit_edges.csv >> ./csv/edges.csv
echo "======== done! ========"
echo "======== Step 7 of 10: Import multimodal graph data from csv files to database... ========"
psql -c "TRUNCATE vertices, edges;" -d $db_name -U $db_user
psql -c "\COPY vertices (out_degree,vertex_id,raw_point_id,mode_id,lon,lat) FROM './csv/vertices.csv' WITH CSV HEADER;" -d $db_name -U $db_user
psql -c "\COPY edges (length,speed_factor,mode_id,from_id,to_id,edge_id,link_id,osm_id) FROM './csv/edges.csv' WITH CSV HEADER;" -d $db_name -U $db_user
psql -d $db_name -U $db_user -f import_street_junctions.sql
psql -d $db_name -U $db_user -f import_street_lines.sql
psql -d $db_name -U $db_user -f import_car_parkings.sql
echo "======== done! ========"
#echo "======== Import initial switch points of car_parking type... ========"
#psql -c "\COPY switch_points (cost,is_available,from_mode_id,to_mode_id,type_id,from_vertex_id,to_vertex_id,switch_point_id,ref_poi_id) FROM './csv/switch_points_car_parking.csv' WITH CSV HEADER;" -d $db_name -U $db_user
echo "======== Step 8 of 10: Generating switch points in database, could be fairly time consuming, so please be patient... ========"
echo "==== Creating nearest neighbor finding function in database... ===="
psql -d $db_name -U $db_user -f pgis_nn.sql
echo "==== done! ===="
echo "==== Generating switch points around each car parking... ===="
psql -d $db_name -U $db_user -f gen_car-parking_switch_points.sql
echo "==== done! ===="
echo "==== Generating switch points around each possible temp parking position... ===="
psql -d $db_name -U $db_user -f gen_geo-conn_switch_points.sql
echo "==== done! ===="
echo "==== Generating switch points around each P+R... ===="
psql -d $db_name -U $db_user -f gen_p+r_switch_points.sql
echo "==== done! ===="
echo "==== Generating switch points around each K+R... ===="
psql -d $db_name -U $db_user -f gen_k+r_switch_points.sql
echo "==== done! ===="
echo "==== Generating switch points around each suburban station... ===="
psql -d $db_name -U $db_user -f gen_s-bahn-station_switch_points.sql
echo "==== done! ===="
echo "==== Generating switch points around each underground station... ===="
psql -d $db_name -U $db_user -f gen_u-bahn-station_switch_points.sql
echo "==== done! ===="
echo "==== Generating switch points around each tram station... ===="
psql -d $db_name -U $db_user -f gen_tram-station_switch_points.sql
echo "==== done! ===="
# validate generated multimodal graphs
echo "======== Step 9 of : Validating multimodal graph... ========"
psql -d $db_name -U $db_user -f validate_graph.sql
echo "======== done! ========"
# clear temp files
rm tmp/*
# backup this new database
echo "======== Step 10 of 10: Backup the database just built up.. ========"
pg_dump -h localhost -p 5432 -U $db_user -Fc -b -v -f "./bak/new_$db_name.backup" $db_name
echo "======== done! ========"
echo "============ All done! ============"
|
tumluliu/mmgraphdb-builder
|
build_mmrp_db.sh
|
Shell
|
mit
| 5,181 |
#!/bin/bash
date > /etc/box_build_time
SSH_USER=${SSH_USERNAME:-vagrant}
SSH_PASS=${SSH_PASSWORD:-vagrant}
SSH_USER_HOME=${SSH_USER_HOME:-/home/${SSH_USER}}
VAGRANT_INSECURE_KEY="ssh-rsa AAAAB3NzaC1yc2EAAAABIwAAAQEA6NF8iallvQVp22WDkTkyrtvp9eWW6A8YVr+kz4TjGYe7gHzIw+niNltGEFHzD8+v1I2YJ6oXevct1YeS0o9HZyN1Q9qgCgzUFtdOKLv6IedplqoPkcmF0aYet2PkEDo3MlTBckFXPITAMzF8dJSIFo9D8HfdOV0IAdx4O7PtixWKn5y2hMNG0zQPyUecp4pzC6kivAIhyfHilFR61RGL+GPXQ2MWZWFYbAGjyiYJnAmCP3NOTd0jMZEnDkbUvxhMmBYSdETk1rRgm+R4LOzFUGaHqHDLKLX+FIPKcF96hrucXzcWyLbIbEgE98OHlnVYCzRdK8jlqm8tehUc9c9WhQ== vagrant insecure public key"
# Create Vagrant user (if not already present)
if ! id -u $SSH_USER >/dev/null 2>&1; then
echo "==> Creating $SSH_USER user"
/usr/sbin/groupadd $SSH_USER
/usr/sbin/useradd $SSH_USER -g $SSH_USER -G sudo -d $SSH_USER_HOME --create-home
echo "${SSH_USER}:${SSH_PASS}" | chpasswd
fi
# Set up sudo
echo "==> Giving ${SSH_USER} sudo powers"
echo "${SSH_USER} ALL=(ALL) NOPASSWD: ALL" >> /etc/sudoers.d/$SSH_USER
chmod 440 /etc/sudoers.d/$SSH_USER
# Fix stdin not being a tty
if grep -q -E "^mesg n$" /root/.profile && sed -i "s/^mesg n$/tty -s \\&\\& mesg n/g" /root/.profile; then
echo "==> Fixed stdin not being a tty."
fi
echo "==> Installing vagrant key"
mkdir $SSH_USER_HOME/.ssh
chmod 700 $SSH_USER_HOME/.ssh
cd $SSH_USER_HOME/.ssh
# https://raw.githubusercontent.com/mitchellh/vagrant/master/keys/vagrant.pub
echo "${VAGRANT_INSECURE_KEY}" > $SSH_USER_HOME/.ssh/authorized_keys
chmod 600 $SSH_USER_HOME/.ssh/authorized_keys
chown -R $SSH_USER:$SSH_USER $SSH_USER_HOME/.ssh
|
KEAOSolutions/development_environment
|
packer/vagrant.sh
|
Shell
|
mit
| 1,602 |
#!/bin/bash
prmd combine -m meta.json ./schemata > schema.json
|
richlab-corp/schema-to-db-json
|
test/fixtures/create.sh
|
Shell
|
mit
| 63 |
#!/bin/bash
# SAVED SSH AGENT
[[ -s "$HOME/.ssh/agent.out" ]] && source ~/.ssh/agent.out
# make sure ssh agent is always running
if ssh-add -l 2>&1 | grep -q -i -E 'could not open|No such file' || [[ ! -s "$HOME/.ssh/agent.out" ]] ; then
eval `ssh-agent` &>/dev/null
fi
# save ssh agent info
echo "export $(env | grep SSH_AUTH_SOCK | head -n 1)" > "$HOME/.ssh/agent.out"
|
rafecolton/bash-starter-kit
|
.bash_profile.d/ssh_agent.sh
|
Shell
|
mit
| 376 |
#!/usr/bin/expect -f
spawn twine upload -r pypi dist/*.tar.gz
expect "Enter your username:"
send "$env(PYPI_USER)\n"
expect "Enter your password:"
send "$env(PYPI_PASSWORD)\n"
interact
|
srgrr/RoundCreator
|
upload_pypi.sh
|
Shell
|
mit
| 196 |
#!/bin/sh
################################################################################
# Title : generateDocumentationAndDeploy.sh
# Date created : 2016/02/22
# Notes : Edited by Stefan Moebius for TurboWavelets.Net project
__AUTHOR__="Jeroen de Bruijn"
# Preconditions:
# - Packages doxygen doxygen-doc doxygen-latex doxygen-gui graphviz
# must be installed.
# - Doxygen configuration file must have the destination directory empty and
# source code directory with a $(TRAVIS_BUILD_DIR) prefix.
# - An gh-pages branch should already exist. See below for mor info on hoe to
# create a gh-pages branch.
#
# Required global variables:
# - TRAVIS_BUILD_NUMBER : The number of the current build.
# - TRAVIS_COMMIT : The commit that the current build is testing.
# - DOXYFILE : The Doxygen configuration file.
# - GH_REPO_NAME : The name of the repository.
# - GH_REPO_REF : The GitHub reference to the repository.
# - GH_REPO_TOKEN : Secure token to the github repository.
#
# For information on how to encrypt variables for Travis CI please go to
# https://docs.travis-ci.com/user/environment-variables/#Encrypted-Variables
# or https://gist.github.com/vidavidorra/7ed6166a46c537d3cbd2
# For information on how to create a clean gh-pages branch from the master
# branch, please go to https://gist.github.com/vidavidorra/846a2fc7dd51f4fe56a0
#
# This script will generate Doxygen documentation and push the documentation to
# the gh-pages branch of a repository specified by GH_REPO_REF.
# Before this script is used there should already be a gh-pages branch in the
# repository.
#
################################################################################
################################################################################
##### Setup this script and get the current gh-pages branch. #####
echo 'Setting up the script...'
# Exit with nonzero exit code if anything fails
set -e
# Create a clean working directory for this script.
mkdir code_docs
cd code_docs
# Get the current gh-pages branch
mkdir source
cd source
git clone https://git@$GH_REPO_REF
cd $GH_REPO_NAME
ls
cd ../..
git clone https://git@$GH_REPO_REF
cd $GH_REPO_NAME
ls
git checkout gh-pages
##### Configure git.
# Set the push default to simple i.e. push only the current branch.
git config --global push.default simple
# Pretend to be an user called Travis CI.
git config user.name "Travis CI"
git config user.email "[email protected]"
# Remove everything currently in the gh-pages branch.
# GitHub is smart enough to know which files have changed and which files have
# stayed the same and will only update the changed files. So the gh-pages branch
# can be safely cleaned, and it is sure that everything pushed later is the new
# documentation.
rm -rf *
cp ../source/$GH_REPO_NAME/TurboWavelets/ TurboWavelets -rf
cp ../source/$GH_REPO_NAME/Doxyfile Doxyfile
cp ../source/$GH_REPO_NAME/graphics/turbowavelets-logo-mini.png turbowavelets-logo-mini.png
ls
# Need to create a .nojekyll file to allow filenames starting with an underscore
# to be seen on the gh-pages site. Therefore creating an empty .nojekyll file.
# Presumably this is only needed when the SHORT_NAMES option in Doxygen is set
# to NO, which it is by default. So creating the file just in case.
echo "" > .nojekyll
################################################################################
##### Generate the Doxygen code documentation and log the output. #####
echo 'Generating Doxygen code documentation...'
# Redirect both stderr and stdout to the log file AND the console.
doxygen $DOXYFILE 2>&1 | tee doxygen.log
rm TurboWavelets -rf
################################################################################
##### Upload the documentation to the gh-pages branch of the repository. #####
# Only upload if Doxygen successfully created the documentation.
# Check this by verifying that the html directory and the file html/index.html
# both exist. This is a good indication that Doxygen did it's work.
if [ -d "html" ] && [ -f "html/index.html" ]; then
echo 'Uploading documentation to the gh-pages branch...'
# Add everything in this directory (the Doxygen code documentation) to the
# gh-pages branch.
# GitHub is smart enough to know which files have changed and which files have
# stayed the same and will only update the changed files.
git add --all
# Commit the added files with a title and description containing the Travis CI
# build number and the GitHub commit reference that issued this build.
git commit -m "Deploy code docs to GitHub Pages Travis build: ${TRAVIS_BUILD_NUMBER}" -m "Commit: ${TRAVIS_COMMIT}"
# Force push to the remote gh-pages branch.
# The ouput is redirected to /dev/null to hide any sensitive credential data
# that might otherwise be exposed.
git push --force "https://${GH_REPO_TOKEN}@${GH_REPO_REF}" > /dev/null 2>&1
else
echo '' >&2
echo 'Warning: No documentation (html) files have been found!' >&2
echo 'Warning: Not going to push the documentation to GitHub!' >&2
exit 1
fi
|
codeprof/TurboWavelets.Net
|
generateDocumentationAndDeploy.sh
|
Shell
|
mit
| 5,154 |
#!/bin/ash
scriptpath="$( cd "$(dirname "$0")" ; pwd -P )"
#!/bin/sh
if [ "$#" -ne 1 ] || ! [ -f "$1" ]; then
echo "Usage: $0 logfile" >&2
exit 1
fi
logfile=$1
# Load config
source $scriptpath/config.sh
mailsend -f $mailsender -t $recipientshourly -smtp $mailsmtp -startssl -user $mailuser -auth -pass $mailpassword -port 587 -sub "Gargoyle Hourly $(date)" -mime-type "text/plain" -msg-body $logfile
|
hb128/gargoyle-flexible-quotas
|
send-mail-hourly.sh
|
Shell
|
mit
| 408 |
#!/bin/bash
#SBATCH --partition=mono
#SBATCH --ntasks=1
#SBATCH --time=4-0:00
#SBATCH --mem-per-cpu=8000
#SBATCH -J Deep-DAE_MLP_5_lin_bin_DAE_relu
#SBATCH -e Deep-DAE_MLP_5_lin_bin_DAE_relu.err.txt
#SBATCH -o Deep-DAE_MLP_5_lin_bin_DAE_relu.out.txt
source /etc/profile.modules
module load gcc
module load matlab
cd ~/deepLearn && srun ./deepFunction 5 'DAE' 'MLP' '128 1000 1000 1000 10' '0 1 1 1 1' '5_lin_bin' 'DAE_relu' "'iteration.n_epochs', 'learning.lrate', 'use_tanh', 'noise.drop', 'noise.level', 'rica.cost', 'cae.cost'" '200 1e-3 2 0.1 0.1 0 0' "'iteration.n_epochs', 'use_tanh'" '200 2'
|
aciditeam/matlab-ts
|
jobs/deepJobs_DAE_MLP_5_lin_bin_DAE_relu.sh
|
Shell
|
mit
| 611 |
#combine, sort and index a bam file
samtools merge -f combined.bam */accepted_hits.bam
samtools sort -f combined.bam combined.sorted
samtools index combined.sorted.bam
#filter a bam file for a particular chromosome set (see http://seqanswers.com/forums/showthread.php?t=6892)
samtools view -h *sorted.bam | awk '$3=="chr1" || $3=="chr3" || /^@/' | samtools view -Sb -> onlychr1_3.bam.sorted.bam
#calculated multi-mapped reads from a bam file (see http://seqanswers.com/forums/showpost.php?p=60498&postcount=4)
samtools view -F 4 file.bam | awk '{printf $1"\n"}' | sort | uniq -d | wc -l
|
davebridges/biomolecule-scripts
|
RNAseq/Shell/samtools.sh
|
Shell
|
cc0-1.0
| 589 |
#!/bin/csh
echo "-------------------"
echo "- SH.DESIGN.Bash -"
echo "- KO -"
echo "-------------------"
echo C-Shell script
|
dupuisa/i-CodeCNES
|
shell-rules/src/test/resources/SH/DESIGN/Bash/error.sh
|
Shell
|
epl-1.0
| 139 |
#!/bin/bash
source $(dirname $0)/vars.sh
test -f "$TWISTED_PID" && kill $(< "$TWISTED_PID") && rm -f "$TWISTED_PID"
|
lanjelot/twisted-honeypots
|
stop.sh
|
Shell
|
gpl-2.0
| 118 |
# function.inc.bash - funkybackup global functions
#
# For more details about the script and to me goto
# http://www.funkytwig.com/blog/funkybackup
#
# (c) 2015 Ben Edwards (funkytwig.com)
# You are alowed to use the script if you keep this head0er
# and do not redistibute it, just send people to the URL
#
# Ver Coments
# 0.5 Initial version
function log {
log_text="$logstamp $basename $1"
if [ $interactive -eq 1 ]; then
echo $log_text
fi
echo "$logstamp $basename($$) $1" >> $logfile
}
function write_error_date {
echo $today > $lasterror
}
function error_today { # ***** not used anywhare yet # *****
if [ -s $lasterror ]; then
read -r line < $lasterror
else
line = ""; # will make next bit echo N, (no errors today)
fi
if [ "$line" = "$today" ]; then
echo "Y"
else
echo "N"
fi
}
function log_file {
while read line
do
log "$line"
done < "$1"
}
function run_cmd {
tmp_log=/tmp/$$_cmd.log
log "$1"
$1 > $tmp_log 2>&1
ret=$?
if [ -f $tmp_log ]; then
log_file $tmp_log
fi
if [ $ret -ne 0 ]; then
log "$ret : $1"
fi
return $ret
}
function send_email {
subject="$1"
message="$2"
file="$3"
temp_file=/tmp/$0_$$.send_email.txt
log "Sendind subject=$subject, message=$message, file=$file"
echo $message >> $temp_file
if [ ! -z $file ]; then # $file set
echo >> $temp_file
cat $file >> $temp_file
fi
mail -s "$subject" $to_email < $temp_file
file="" # in case this is called twice
}
function error {
log "ERROR $1"
# to avoide lots or error emails see if an email has already been sent today
send_email "Error from $0" "$1"
write_error_date
}
|
funkytwig/funkybackup
|
function.inc.bash
|
Shell
|
gpl-2.0
| 1,713 |
#
# Copyright (C) 2008 The Android Open Source Project
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
#
# This file is executed by build/envsetup.sh, and can use anything
# defined in envsetup.sh.
#
# In particular, you can add lunch options with the add_lunch_combo
# function: add_lunch_combo generic-eng
add_lunch_combo cm_b8080h-userdebug
add_lunch_combo cm_b8080h-eng
|
zyrill/android_device_lenovo_b8080h
|
vendorsetup.sh
|
Shell
|
gpl-2.0
| 870 |
#!/bin/bash
### USAGE:
## installs printer ${PRINTER_NAME}
## with driver ${PRINTER_DRIVER}
## and ${PRINTER_LOCATION}
## and ${PRINTER_CONNECTION}
##
## AND should be named after printer modell
## example: installPrinter_Brother_HL-7050.sh
##
## BECAUSE, enables installation of new printer with new name
## without problems
#### START DEFINE PARAMETER
PRINTER_NAME="Raum-216-Printer"
PRINTER_LOCATION="Drucker im Raum 216"
PRINTER_CONNECTION="socket://r216pr01"
## HELP to find printer modell:
## Find Print Driver with:
## >> lpinfo --make-and-model 'Lexmark' -m
PRINTER_DRIVER="drv:///hpcups.drv/hp-laserjet_p2055dn-pcl3.ppd"
#### END DEFINE PARAMETER
## check if printer ${PRINTER_NAME} already installed
## remove, if already installed, and enable installation of new one
if [ "$(lpstat -v | grep ${PRINTER_NAME})" != "" ];
then
lpadmin -x ${PRINTER_NAME}
fi
## Options in lpadmin declared:
# -E Enables the destination and accepts jobs
# -p Specifies a PostScript Printer Description file to use with the printer.
# -v device-uri
# -m Sets a standard System V interface script or PPD file for the printer from the model directory or using one of the driver interfaces
# -L Provides a textual location of the destination.
# Note the two -E options. The first one (before -p) forces encryption when connecting to the server. The last one enables the destination and starts accepting jobs.
lpadmin -E -p "${PRINTER_NAME}" -v ${PRINTER_CONNECTION} -m ${PRINTER_DRIVER} -L "${PRINTER_LOCATION}" -E
# set as Default Printer
lpadmin -d ${PRINTER_NAME}
|
edvapp/autoinstall
|
laus/scriptsForClasses/APP/R216/010-installPrinter-HP_LaserJet_p2055dn.sh
|
Shell
|
gpl-2.0
| 1,575 |
#!/bin/bash
export PATH=/data/apps/bin:$PATH
cd /data/Lacuna-Server-Open/bin
perl generate_docs.pl > /dev/null
killall -HUP start_server
|
plainblack/Lacuna-Server-Open
|
bin/restart_starman.sh
|
Shell
|
gpl-2.0
| 137 |
#!/bin/bash
PROJECTS=~/projects
GITHUB_HOME="https://raw.githubusercontent.com/lorenzocipriani/RaspberryPI"
echo -e "\n\nInstall PicoBorg Reverse"
if [ ! -d "${PROJECTS}/picoborgrev" ]
then
mkdir -p $PROJECTS/picoborgrev
fi
cd $PROJECTS/picoborgrev
wget http://www.piborg.org/downloads/picoborgrev/examples.zip
unzip examples.zip
chmod +x install.sh
./install.sh
cd ~
echo -e "\n\nInstall HC-SR04 Ultrasonic Range Sensor"
if [ ! -d "${PROJECTS}/rangesensor_hc-sr04" ]
then
mkdir -p $PROJECTS/rangesensor_hc-sr04
fi
wget -O $PROJECTS/rangesensor_hc-sr04/range_sensor.py $GITHUB_HOME/master/projects/rangesensor_hc-sr04/range_sensor.py
echo -e "\n\nInstall HC-SR501 PIR Infrared Motion Sensor"
if [ ! -d "${PROJECTS}/motionsensor_hc-sr501" ]
then
mkdir -p $PROJECTS/motionsensor_hc-sr501
fi
wget -O $PROJECTS/motionsensor_hc-sr501/motion_sensor.py $GITHUB_HOME/master/projects/motionsensor_hc-sr501/motion_sensor.py
|
lorenzocipriani/RaspberryPI
|
config/ibm-coderdojo-projects.sh
|
Shell
|
gpl-2.0
| 924 |
# Openstack icehouse installation script on ubuntu 14.04
# by kasidit chanchio
# vasabilab, dept of computer science,
# Thammasat University, Thailand
#
# Copyright 2014 Kasidit Chanchio
#
# run with sudo or as root.
#
#!/bin/bash -x
cd $HOME/OPSInstaller/controller
pwd
#
echo "manual" > /etc/init/keystone.override
apt-get -y install keystone apache2 libapache2-mod-wsgi
cp files/keystone.conf /etc/keystone/keystone.conf
echo "su -s /bin/sh -c \"keystone-manage db_sync\" keystone"
su -s /bin/sh -c "keystone-manage db_sync" keystone
#
echo keystone-manage fernet_setup --keystone-user keystone --keystone-group keystone
keystone-manage fernet_setup --keystone-user keystone --keystone-group keystone
#
cp files/apache2.conf /etc/apache2/apache2.conf
cp files/wsgi-keystone.conf /etc/apache2/sites-available/wsgi-keystone.conf
ln -s /etc/apache2/sites-available/wsgi-keystone.conf /etc/apache2/sites-enabled
service apache2 restart
rm -f /var/lib/keystone/keystone.db
|
kasidit/openstack-mitaka-installer
|
documents/OPSInstaller.example/controller/exe-stage09-SUDO-keystone.sh
|
Shell
|
gpl-2.0
| 978 |
convert images/OCS-514-A.png -crop 1560x1411+0+0 +repage images/OCS-514-A-0.png
convert images/OCS-514-A.png -crop 1560x557+0+1414 +repage images/OCS-514-A-1.png
convert images/OCS-514-A.png -crop 1560x693+0+1976 +repage images/OCS-514-A-2.png
convert images/OCS-514-A.png -crop 1560x453+0+2690 +repage images/OCS-514-A-3.png
convert images/OCS-514-A.png -crop 1560x305+0+3170 +repage images/OCS-514-A-4.png
convert images/OCS-514-A.png -crop 1560x385+0+3488 +repage images/OCS-514-A-5.png
convert images/OCS-514-A.png -crop 1560x709+0+3884 +repage images/OCS-514-A-6.png
#
#/OCS-514.png
convert images/OCS-514-B.png -crop 1519x863+0+0 +repage images/OCS-514-B-0.png
convert -append images/OCS-514-A-6.png images/OCS-514-B-0.png images/OCS-514-A-6.png
rm images/OCS-514-B-0.png
convert images/OCS-514-B.png -crop 1519x314+0+870 +repage images/OCS-514-B-1.png
convert images/OCS-514-B.png -crop 1519x476+0+1177 +repage images/OCS-514-B-2.png
convert images/OCS-514-B.png -crop 1519x389+0+1666 +repage images/OCS-514-B-3.png
convert images/OCS-514-B.png -crop 1519x71+0+2062 +repage images/OCS-514-B-4.png
convert images/OCS-514-B.png -crop 1519x1413+0+2142 +repage images/OCS-514-B-5.png
convert images/OCS-514-B.png -crop 1519x459+0+3568 +repage images/OCS-514-B-6.png
convert images/OCS-514-B.png -crop 1519x553+0+4046 +repage images/OCS-514-B-7.png
#
#/OCS-514.png
|
jonnymwalker/Staroslavjanskij-Slovar
|
scripts/findindents.OCS-514.sh
|
Shell
|
gpl-2.0
| 1,367 |
python3 runmeka.py Arts1500 -f 5 -c 26 -mc meka.classifiers.multilabel.BR -o ./exp/meka/nbbr/ > ./exp/meka/nbbr/arts.log
python3 runmeka.py birds -c 19 -f 5 -mc meka.classifiers.multilabel.BR -o ./exp/meka/nbbr/ > ./exp/meka/nbbr/birds.log
python3 runmeka.py Business1500 -c 30 -f 5 -mc meka.classifiers.multilabel.BR -o ./exp/meka/nbbr/ > ./exp/meka/nbbr/business.log
python3 runmeka.py CAL500 -c 174 -f 5 -mc meka.classifiers.multilabel.BR -o ./exp/meka/nbbr/ > ./exp/meka/nbbr/cal.log
python3 runmeka.py emotions -c 6 -f 5 -mc meka.classifiers.multilabel.BR -o ./exp/meka/nbbr/ > ./exp/meka/nbbr/emotions.log
python3 runmeka.py flags -c 7 -f 5 -mc meka.classifiers.multilabel.BR -o ./exp/meka/nbbr/ > ./exp/meka/nbbr/flags.log
python3 runmeka.py Health1500 -c 32 -f 5 -mc meka.classifiers.multilabel.BR -o ./exp/meka/nbbr/ > ./exp/meka/nbbr/health.log
python3 runmeka.py human3106 -c 14 -f 5 -mc meka.classifiers.multilabel.BR -o ./exp/meka/nbbr/ > ./exp/meka/nbbr/human.log
python3 runmeka.py plant978 -c 12 -f 5 -mc meka.classifiers.multilabel.BR -o ./exp/meka/nbbr/ > ./exp/meka/nbbr/plant.log
python3 runmeka.py scene -c 6 -f 5 -mc meka.classifiers.multilabel.BR -o ./exp/meka/nbbr/ > ./exp/meka/nbbr/scene.log
python3 runmeka.py yeast -c 14 -f 5 -mc meka.classifiers.multilabel.BR -o ./exp/meka/nbbr/ > ./exp/meka/nbbr/yeast.log
python3 runmeka.py Arts1500 -c 26 -f 5 -mc meka.classifiers.multilabel.CC -o ./exp/meka/nbcc/ > ./exp/meka/nbcc/arts.log
python3 runmeka.py birds -c 19 -f 5 -mc meka.classifiers.multilabel.CC -o ./exp/meka/nbcc/ > ./exp/meka/nbcc/birds.log
python3 runmeka.py Business1500 -c 30 -f 5 -mc meka.classifiers.multilabel.CC -o ./exp/meka/nbcc/ > ./exp/meka/nbcc/business.log
python3 runmeka.py CAL500 -c 174 -f 5 -mc meka.classifiers.multilabel.CC -o ./exp/meka/nbcc/ > ./exp/meka/nbcc/cal.log
python3 runmeka.py emotions -c 6 -f 5 -mc meka.classifiers.multilabel.CC -o ./exp/meka/nbcc/ > ./exp/meka/nbcc/emotions.log
python3 runmeka.py flags -c 7 -f 5 -mc meka.classifiers.multilabel.CC -o ./exp/meka/nbcc/ > ./exp/meka/nbcc/flags.log
python3 runmeka.py Health1500 -c 32 -f 5 -mc meka.classifiers.multilabel.CC -o ./exp/meka/nbcc/ > ./exp/meka/nbcc/health.log
python3 runmeka.py human3106 -c 14 -f 5 -mc meka.classifiers.multilabel.CC -o ./exp/meka/nbcc/ > ./exp/meka/nbcc/human.log
python3 runmeka.py plant978 -c 12 -f 5 -mc meka.classifiers.multilabel.CC -o ./exp/meka/nbcc/ > ./exp/meka/nbcc/plant.log
python3 runmeka.py scene -c 6 -f 5 -mc meka.classifiers.multilabel.CC -o ./exp/meka/nbcc/ > ./exp/meka/nbcc/scene.log
python3 runmeka.py yeast -c 14 -f 5 -mc meka.classifiers.multilabel.CC -o ./exp/meka/nbcc/ > ./exp/meka/nbcc/yeast.log
|
nicoladimauro/dcsn
|
scripts/PGM16/runmekaNB.sh
|
Shell
|
gpl-2.0
| 2,676 |
# ----------------------------------------------------------------------------
# Calcula porcentagens.
# Se informado um número, mostra sua tabela de porcentagens.
# Se informados dois números, mostra a porcentagem relativa entre eles.
# Se informados um número e uma porcentagem, mostra o valor da porcentagem.
# Se informados um número e uma porcentagem com sinal, calcula o novo valor.
#
# Uso: zzporcento valor [valor|[+|-]porcentagem%]
# Ex.: zzporcento 500 # Tabela de porcentagens de 500
# zzporcento 500.0000 # Tabela para número fracionário (.)
# zzporcento 500,0000 # Tabela para número fracionário (,)
# zzporcento 5.000,00 # Tabela para valor monetário
# zzporcento 500 25 # Mostra a porcentagem de 25 para 500 (5%)
# zzporcento 500 1000 # Mostra a porcentagem de 1000 para 500 (200%)
# zzporcento 500,00 2,5% # Mostra quanto é 2,5% de 500,00
# zzporcento 500,00 +2,5% # Mostra quanto é 500,00 + 2,5%
#
# Autor: Aurelio Marinho Jargas, www.aurelio.net
# Desde: 2008-12-11
# Versão: 6
# Licença: GPL
# Requisitos: zztestar
# Tags: número, cálculo
# ----------------------------------------------------------------------------
zzporcento ()
{
zzzz -h porcento "$1" && return
local i porcentagem sinal
local valor1="$1"
local valor2="$2"
local escala=0
local separador=','
local tabela='200 150 125 100 90 80 75 70 60 50 40 30 25 20 15 10 9 8 7 6 5 4 3 2 1'
# Verificação dos parâmetros
test -n "$1" || { zztool -e uso porcento; return 1; }
# Remove os pontos dos dinheiros para virarem fracionários (1.234,00 > 1234,00)
zztestar dinheiro "$valor1" && valor1=$(echo "$valor1" | sed 's/\.//g')
zztestar dinheiro "$valor2" && valor2=$(echo "$valor2" | sed 's/\.//g')
### Vamos analisar o primeiro valor
# Número fracionário (1.2345 ou 1,2345)
if zztestar numero_fracionario "$valor1"
then
separador=$(echo "$valor1" | tr -d 0-9)
escala=$(echo "$valor1" | sed 's/.*[.,]//')
escala="${#escala}"
# Sempre usar o ponto como separador interno (para os cálculos)
valor1=$(echo "$valor1" | sed 'y/,/./')
# Número inteiro ou erro
else
zztool -e testa_numero "$valor1" || return 1
fi
### Vamos analisar o segundo valor
# O segundo argumento é uma porcentagem
if test $# -eq 2 && zztool grep_var % "$valor2"
then
# O valor da porcentagem é guardado sem o caractere %
porcentagem=$(echo "$valor2" | tr -d %)
# Sempre usar o ponto como separador interno (para os cálculos)
porcentagem=$(echo "$porcentagem" | sed 'y/,/./')
# Há um sinal no início?
if test "${porcentagem#[+-]}" != "$porcentagem"
then
sinal=$(printf %c $porcentagem) # pega primeiro char
porcentagem=${porcentagem#?} # remove primeiro char
fi
# Porcentagem fracionada
if zztestar numero_fracionario "$porcentagem"
then
# Se o valor é inteiro (escala=0) e a porcentagem fracionária,
# é preciso forçar uma escala para que o resultado apareça correto.
test $escala -eq 0 && escala=2 valor1="$valor1.00"
# Porcentagem inteira ou erro
elif ! zztool testa_numero "$porcentagem"
then
zztool erro "O valor da porcentagem deve ser um número. Exemplos: 2 ou 2,5."
return 1
fi
# O segundo argumento é um número
elif test $# -eq 2
then
# Ao mostrar a porcentagem entre dois números, a escala é fixa
escala=2
# O separador do segundo número é quem "manda" na saída
# Sempre usar o ponto como separador interno (para os cálculos)
# Número fracionário
if zztestar numero_fracionario "$valor2"
then
separador=$(echo "$valor2" | tr -d 0-9)
valor2=$(echo "$valor2" | sed 'y/,/./')
# Número normal ou erro
else
zztool -e testa_numero "$valor2" || return 1
fi
fi
# Ok. Dados coletados, analisados e formatados. Agora é hora dos cálculos.
# Mostra tabela
if test $# -eq 1
then
for i in $tabela
do
printf "%s%%\t%s\n" $i $(echo "scale=$escala; $valor1*$i/100" | bc)
done
# Mostra porcentagem
elif test $# -eq 2
then
# Mostra a porcentagem relativa entre dois números
if ! zztool grep_var % "$valor2"
then
echo "scale=$escala; $valor2*100/$valor1" | bc | sed 's/$/%/'
# valor + n% é igual a…
elif test "$sinal" = '+'
then
echo "scale=$escala; $valor1+$valor1*$porcentagem/100" | bc
# valor - n% é igual a…
elif test "$sinal" = '-'
then
echo "scale=$escala; $valor1-$valor1*$porcentagem/100" | bc
# n% do valor é igual a…
else
echo "scale=$escala; $valor1*$porcentagem/100" | bc
### Saída antiga, uma mini tabelinha
# printf "%s%%\t%s\n" "+$porcentagem" $(echo "scale=$escala; $valor1+$valor1*$porcentagem/100" | bc)
# printf "%s%%\t%s\n" 100 "$valor1"
# printf "%s%%\t%s\n" "-$porcentagem" $(echo "scale=$escala; $valor1-$valor1*$porcentagem/100" | bc)
# echo
# printf "%s%%\t%s\n" "$porcentagem" $(echo "scale=$escala; $valor1*$porcentagem/100" | bc)
#
# | sed "s/\([^0-9]\)\./\10./ ; s/^\./0./; y/./$separador/"
fi
fi |
# Assegura 0.123 (em vez de .123) e restaura o separador original
sed "s/^\./0./; y/./$separador/"
}
|
faustovaz/funcoeszz
|
zz/zzporcento.sh
|
Shell
|
gpl-2.0
| 5,134 |
#!/bin/bash
#
# Test the capture engine of the Wireshark tools
#
# $Id: suite-capture.sh 43536 2012-06-28 22:56:06Z darkjames $
#
# Wireshark - Network traffic analyzer
# By Gerald Combs <[email protected]>
# Copyright 2005 Ulf Lamping
#
# This program is free software; you can redistribute it and/or
# modify it under the terms of the GNU General Public License
# as published by the Free Software Foundation; either version 2
# of the License, or (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, writeto the Free Software
# Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
#
# common exit status values
EXIT_OK=0
EXIT_COMMAND_LINE=1
EXIT_ERROR=2
WIRESHARK_CMD="$WIRESHARK -k"
capture_test_output_print() {
wait
for f in "$@"; do
if [[ -f "$f" ]]; then
printf " --> $f\n"
cat "$f"
printf "\n"
fi
done
}
traffic_gen_ping() {
# Generate some traffic for quiet networks.
# This will have to be adjusted for non-Windows systems.
# the following will run in the background and return immediately
{
date
for (( x=28; x<=58; x++ )) # in effect: number the packets
do
# How does ping _not_ have a standard set of arguments?
case $WS_SYSTEM in
Windows)
ping -n 1 -l $x www.wireshark.org ;;
SunOS)
/usr/sbin/ping www.wireshark.org $x 1 ;;
*) # *BSD, Linux
ping -c 1 -s $x www.wireshark.org ;;
esac
sleep 1
done
date
} > ./testout_ping.txt 2>&1 &
}
ping_cleanup() {
wait
rm -f ./testout_ping.txt
}
# capture exactly 10 packets
capture_step_10packets() {
if [ $SKIP_CAPTURE -ne 0 ] ; then
test_step_skipped
return
fi
traffic_gen_ping
date > ./testout.txt
$DUT -i $TRAFFIC_CAPTURE_IFACE $TRAFFIC_CAPTURE_PROMISC \
-w ./testout.pcap \
-c 10 \
-a duration:$TRAFFIC_CAPTURE_DURATION \
-f icmp \
>> ./testout.txt 2>&1
RETURNVALUE=$?
date >> ./testout.txt
if [ ! $RETURNVALUE -eq $EXIT_OK ]; then
echo
capture_test_output_print ./testout.txt
# part of the Prerequisite checks
# wrong interface ? output the possible interfaces
$TSHARK -D
test_step_failed "exit status of $DUT: $RETURNVALUE"
return
fi
# we should have an output file now
if [ ! -f "./testout.pcap" ]; then
capture_test_output_print ./testout.txt
test_step_failed "No output file!"
return
fi
# ok, we got a capture file, does it contain exactly 10 packets?
$CAPINFOS ./testout.pcap > ./testout2.txt
grep -Ei 'Number of packets:[[:blank:]]+10' ./testout2.txt > /dev/null
if [ $? -eq 0 ]; then
test_step_ok
else
echo
$TSHARK -ta -r ./testout.pcap >> ./testout2.txt
capture_test_output_print ./testout_ping.txt ./testout.txt ./testout2.txt
# part of the Prerequisite checks
# probably wrong interface, output the possible interfaces
$TSHARK -D
test_step_failed "No or not enough traffic captured. Probably the wrong interface: $TRAFFIC_CAPTURE_IFACE!"
fi
}
# capture exactly 10 packets using "-w -" (piping to stdout)
capture_step_10packets_stdout() {
if [ $SKIP_CAPTURE -ne 0 ] ; then
test_step_skipped
return
fi
traffic_gen_ping
date > ./testout.txt
$DUT -i $TRAFFIC_CAPTURE_IFACE $TRAFFIC_CAPTURE_PROMISC \
-c 10 \
-a duration:$TRAFFIC_CAPTURE_DURATION \
-w - \
-f icmp \
> ./testout.pcap 2>>./testout.txt
RETURNVALUE=$?
date >> ./testout.txt
if [ ! $RETURNVALUE -eq $EXIT_OK ]; then
echo
capture_test_output_print ./testout.txt
$TSHARK -D
test_step_failed "exit status of $DUT: $RETURNVALUE"
return
fi
# we should have an output file now
if [ ! -f "./testout.pcap" ]; then
test_step_failed "No output file!"
return
fi
# ok, we got a capture file, does it contain exactly 10 packets?
$CAPINFOS ./testout.pcap > ./testout2.txt 2>&1
grep -Ei 'Number of packets:[[:blank:]]+10' ./testout2.txt > /dev/null
if [ $? -eq 0 ]; then
test_step_ok
else
echo
capture_test_output_print ./testout.txt ./testout2.txt
$TSHARK -D
test_step_failed "No or not enough traffic captured. Probably the wrong interface: $TRAFFIC_CAPTURE_IFACE!"
fi
}
# capture packets via a fifo
capture_step_fifo() {
mkfifo 'fifo'
(cat "${CAPTURE_DIR}dhcp.pcap"; sleep 1; tail -c +25 "${CAPTURE_DIR}dhcp.pcap") > fifo &
$DUT -i fifo $TRAFFIC_CAPTURE_PROMISC \
-w ./testout.pcap \
-a duration:$TRAFFIC_CAPTURE_DURATION \
> ./testout.txt 2>&1
RETURNVALUE=$?
rm 'fifo'
if [ ! $RETURNVALUE -eq $EXIT_OK ]; then
capture_test_output_print ./testout.txt
test_step_failed "exit status of $DUT: $RETURNVALUE"
return
fi
# we should have an output file now
if [ ! -f "./testout.pcap" ]; then
test_step_failed "No output file!"
return
fi
# ok, we got a capture file, does it contain exactly 8 packets?
$CAPINFOS ./testout.pcap > ./testout.txt
grep -Ei 'Number of packets:[[:blank:]]+8' ./testout.txt > /dev/null
if [ $? -eq 0 ]; then
test_step_ok
else
echo
capture_test_output_print ./testout.txt
test_step_failed "No or not enough traffic captured."
fi
}
# capture packets via a fifo
capture_step_stdin() {
CONSOLE_LOG_ARGS=""
if [ "$DUT" == "$WIRESHARK_CMD" -a "$WS_SYSTEM" == "Windows" ] ; then
CONSOLE_LOG_ARGS="-o console.log.level:127"
fi
(cat "${CAPTURE_DIR}dhcp.pcap"; sleep 1; tail -c +25 "${CAPTURE_DIR}dhcp.pcap") | \
$DUT -i - $TRAFFIC_CAPTURE_PROMISC \
-w ./testout.pcap \
-a duration:$TRAFFIC_CAPTURE_DURATION \
$CONSOLE_LOG_ARGS \
> ./testout.txt 2> ./testerr.txt
RETURNVALUE=$?
if [ ! $RETURNVALUE -eq $EXIT_OK ]; then
capture_test_output_print ./testout.txt ./testerr.txt ./dumpcap_debug_log.tmp
test_step_failed "Exit status of $DUT: $RETURNVALUE"
return
fi
if [ -n "$CONSOLE_LOG_ARGS" ] ; then
grep "Wireshark is up and ready to go" ./testout.txt > /dev/null 2>&1
if [ $? -ne 0 ]; then
test_step_failed "No startup message!"
fi
grep "Capture started" ./testerr.txt > /dev/null 2>&1
if [ $? -ne 0 ]; then
test_step_failed "No capture started message!"
fi
grep "Capture stopped" ./testerr.txt > /dev/null 2>&1
if [ $? -ne 0 ]; then
test_step_failed "No capture stopped message!"
fi
fi
# we should have an output file now
if [ ! -f "./testout.pcap" ]; then
test_step_failed "No output file!"
return
fi
# ok, we got a capture file, does it contain exactly 8 packets?
$CAPINFOS ./testout.pcap > ./testout.txt
grep -Ei 'Number of packets:[[:blank:]]+8' ./testout.txt > /dev/null
if [ $? -eq 0 ]; then
test_step_ok
else
echo
capture_test_output_print ./testout.txt
test_step_failed "No or not enough traffic captured."
fi
}
# capture exactly 2 times 10 packets (multiple files)
capture_step_2multi_10packets() {
if [ $SKIP_CAPTURE -ne 0 ] ; then
test_step_skipped
return
fi
traffic_gen_ping
date > ./testout.txt
$DUT -i $TRAFFIC_CAPTURE_IFACE $TRAFFIC_CAPTURE_PROMISC \
-w ./testout.pcap \
-c 10 \
-a duration:$TRAFFIC_CAPTURE_DURATION \
-f icmp \
>> ./testout.txt 2>&1
RETURNVALUE=$?
date >> ./testout.txt
if [ ! $RETURNVALUE -eq $EXIT_OK ]; then
echo
capture_test_output_print ./testout.txt
# part of the Prerequisite checks
# probably wrong interface, output the possible interfaces
$TSHARK -D
test_step_failed "exit status of $DUT: $RETURNVALUE"
return
fi
# we should have an output file now
if [ ! -f "./testout.pcap" ]; then
test_step_failed "No output file!"
return
fi
# ok, we got a capture file, does it contain exactly 10 packets?
$CAPINFOS ./testout.pcap > ./testout.txt
grep -Ei 'Number of packets:[[:blank:]]+10' ./testout.txt > /dev/null
if [ $? -eq 0 ]; then
test_step_ok
else
echo
capture_test_output_print ./testout.txt
test_step_failed "Probably the wrong interface (no traffic captured)!"
fi
}
# capture with a very unlikely read filter, packets must be zero afterwards
capture_step_read_filter() {
if [ $SKIP_CAPTURE -ne 0 ] ; then
test_step_skipped
return
fi
traffic_gen_ping
# valid, but very unlikely filter
date > ./testout.txt
$DUT -i $TRAFFIC_CAPTURE_IFACE $TRAFFIC_CAPTURE_PROMISC \
-w ./testout.pcap \
-a duration:$TRAFFIC_CAPTURE_DURATION \
-R 'dcerpc.cn_call_id==123456' \
-c 10 \
-f icmp \
>> ./testout.txt 2>&1
RETURNVALUE=$?
date >> ./testout.txt
if [ ! $RETURNVALUE -eq $EXIT_OK ]; then
echo
capture_test_output_print ./testout.txt
# part of the Prerequisite checks
# wrong interface ? output the possible interfaces
$TSHARK -D
test_step_failed "exit status: $RETURNVALUE"
return
fi
# we should have an output file now
if [ ! -f "./testout.pcap" ]; then
test_step_failed "No output file!"
return
fi
# ok, we got a capture file, does it contain exactly 0 packets?
$CAPINFOS ./testout.pcap > ./testout.txt
grep -Ei 'Number of packets:[[:blank:]]+0' ./testout.txt > /dev/null
if [ $? -eq 0 ]; then
test_step_ok
else
echo
capture_test_output_print ./testout.txt
test_step_failed "Capture file should contain zero packets!"
fi
}
# capture with a snapshot length
capture_step_snapshot() {
if [ $SKIP_CAPTURE -ne 0 ] ; then
test_step_skipped
return
fi
traffic_gen_ping
# capture with a snapshot length of 68 bytes for $TRAFFIC_CAPTURE_DURATION seconds
# this should result in no packets greater than 68 bytes
date > ./testout.txt
$DUT -i $TRAFFIC_CAPTURE_IFACE $TRAFFIC_CAPTURE_PROMISC \
-w ./testout.pcap \
-s 68 \
-a duration:$TRAFFIC_CAPTURE_DURATION \
-f icmp \
>> ./testout.txt 2>&1
RETURNVALUE=$?
date >> ./testout.txt
if [ ! $RETURNVALUE -eq $EXIT_OK ]; then
echo
capture_test_output_print ./testout.txt
# part of the Prerequisite checks
# wrong interface ? output the possible interfaces
$TSHARK -D
test_step_failed "exit status: $RETURNVALUE"
return
fi
# we should have an output file now
if [ ! -f "./testout.pcap" ]; then
test_step_failed "No output file!"
return
fi
# use tshark to filter out all packets, which are larger than 68 bytes
$TSHARK -r ./testout.pcap -w ./testout2.pcap -R 'frame.cap_len>68' > ./testout.txt 2>&1
if [ $? -ne 0 ]; then
echo
capture_test_output_print ./testout.txt
test_step_failed "Problem running TShark!"
return
fi
# ok, we got a capture file, does it contain exactly 0 packets?
$CAPINFOS ./testout2.pcap > ./testout.txt
grep -Ei 'Number of packets:[[:blank:]]+0' ./testout.txt > /dev/null
if [ $? -eq 0 ]; then
test_step_ok
else
echo
capture_test_output_print ./testout.txt
test_step_failed "Capture file should contain zero packets!"
return
fi
}
wireshark_capture_suite() {
# k: start capture immediately
# WIRESHARK_QUIT_AFTER_CAPTURE needs to be set.
DUT="$WIRESHARK_CMD"
test_step_add "Capture 10 packets" capture_step_10packets
# piping to stdout doesn't work with Wireshark and capturing!
#test_step_add "Capture 10 packets using stdout: -w -" capture_step_10packets_stdout
if [ $TEST_FIFO ]; then
test_step_add "Capture via fifo" capture_step_fifo
fi
test_step_add "Capture via stdin" capture_step_stdin
# read filter doesn't work with Wireshark and capturing!
#test_step_add "Capture read filter (${TRAFFIC_CAPTURE_DURATION}s)" capture_step_read_filter
test_step_add "Capture snapshot length 68 bytes (${TRAFFIC_CAPTURE_DURATION}s)" capture_step_snapshot
}
tshark_capture_suite() {
DUT=$TSHARK
test_step_add "Capture 10 packets" capture_step_10packets
test_step_add "Capture 10 packets using stdout: -w -" capture_step_10packets_stdout
if [ $TEST_FIFO ]; then
test_step_add "Capture via fifo" capture_step_fifo
fi
test_step_add "Capture via stdin" capture_step_stdin
# tshark now using dumpcap for capturing, read filters won't work by definition
#test_step_add "Capture read filter (${TRAFFIC_CAPTURE_DURATION}s)" capture_step_read_filter
test_step_add "Capture snapshot length 68 bytes (${TRAFFIC_CAPTURE_DURATION}s)" capture_step_snapshot
}
dumpcap_capture_suite() {
#DUT="$DUMPCAP -Q"
DUT=$DUMPCAP
test_step_add "Capture 10 packets" capture_step_10packets
test_step_add "Capture 10 packets using stdout: -w -" capture_step_10packets_stdout
if [ $TEST_FIFO ]; then
test_step_add "Capture via fifo" capture_step_fifo
fi
test_step_add "Capture via stdin" capture_step_stdin
# read (display) filters intentionally doesn't work with dumpcap!
#test_step_add "Capture read filter (${TRAFFIC_CAPTURE_DURATION}s)" capture_step_read_filter
test_step_add "Capture snapshot length 68 bytes (${TRAFFIC_CAPTURE_DURATION}s)" capture_step_snapshot
}
capture_cleanup_step() {
ping_cleanup
rm -f ./testout.txt
rm -f ./testerr.txt
rm -f ./testout2.txt
rm -f ./testout.pcap
rm -f ./testout2.pcap
}
capture_suite() {
test_step_set_pre capture_cleanup_step
test_step_set_post capture_cleanup_step
test_remark_add "Capture - need some traffic on interface: \"$TRAFFIC_CAPTURE_IFACE\""
test_suite_add "Dumpcap capture" dumpcap_capture_suite
test_suite_add "TShark capture" tshark_capture_suite
test_suite_add "Wireshark capture" wireshark_capture_suite
}
|
MavEtJu/wireshark-lean
|
test/suite-capture.sh
|
Shell
|
gpl-2.0
| 13,568 |
csp(){
local file=$1
sed -i 's/\s\+$//' $file
}
git-prompt(){
[[ $- == *i* ]] && . ~/myscripts/git-prompt
which hub && ~/myscripts/hub.bash_completion.sh
}
alias gs='git status'
alias gl='git pull'
alias gp='git push'
alias gd='git diff'
alias ga='git add'
alias gau='git add --update'
alias gc='git commit -v'
alias gca='git commit -v -a'
alias gb='git branch'
alias gba='git branch -a'
alias gco='git checkout'
alias gcob='git checkout -b'
alias gcot='git checkout -t'
alias gcotb='git checkout --track -b'
alias glog='git log'
alias glogp='git log --pretty=format:"%h %s" --graph'
alias gll='git log --pretty=format:"%C(yellow)%h%Cred%d\\ %Creset%s%Cblue\\ [%cn]" --decorate --numstat'
alias gba='git blame'
|
agustim/myscripts
|
git.sh
|
Shell
|
gpl-2.0
| 721 |
#!/bin/bash
KERNEL_DIR=$PWD
INITRAMFS_SRC_DIR=../sc02c_initramfs
INITRAMFS_TMP_DIR=/tmp/sc02c_initramfs
cpoy_initramfs()
{
if [ -d $INITRAMFS_TMP_DIR ]; then
rm -rf $INITRAMFS_TMP_DIR
fi
cp -a $INITRAMFS_SRC_DIR $(dirname $INITRAMFS_TMP_DIR)
rm -rf $INITRAMFS_TMP_DIR/.git
find $INITRAMFS_TMP_DIR -name .gitignore | xargs rm
}
# check target
BUILD_TARGET=$1
case "$BUILD_TARGET" in
"AOSP" ) BUILD_DEFCONFIG=c1_sc02c_aosp_defconfig ;;
"SAM" ) BUILD_DEFCONFIG=c1_sc02c_samsung_defconfig ;;
"MULTI" ) BUILD_DEFCONFIG=c1_sc02c_multi_defconfig ;;
* ) echo "error: not found BUILD_TARGET" && exit -1 ;;
esac
BIN_DIR=out/$BUILD_TARGET/bin
OBJ_DIR=out/$BUILD_TARGET/obj
mkdir -p $BIN_DIR
mkdir -p $OBJ_DIR
# generate boot splash header
if [ ! -n "$3" ]; then
read -p "select boots plash image (default:none) : " SPLASH_IMAGE_SELECT
SPLASH_IMAGE=`find ./boot-splash/ -type f | grep $SPLASH_IMAGE_SELECT`
else
SPLASH_IMAGE=`find ./boot-splash/ -type f | grep $3`
fi
if [ -n "$SPLASH_IMAGE" ]; then
# make simg2img
if [ ! -e ./release-tools/bmp2splash/bmp2splash ]; then
echo "make bmp2splash..."
make -C ./release-tools/bmp2splash
fi
echo "generate bmp2splash header from $SPLASH_IMAGE..."
./release-tools/bmp2splash/bmp2splash $SPLASH_IMAGE > ./drivers/video/samsung/logo_rgb24_user.h
if [ $? != 0 ]; then
exit -1
fi
export USER_BOOT_SPLASH=y
else
echo "not slect boot splash"
fi
# generate LOCALVERSION
. mod_version
# check and get compiler
. cross_compile
# set build env
export ARCH=arm
export CROSS_COMPILE=$BUILD_CROSS_COMPILE
#export USE_SEC_FIPS_MODE=true
export LOCALVERSION="-$BUILD_LOCALVERSION"
echo "=====> BUILD START $BUILD_KERNELVERSION-$BUILD_LOCALVERSION"
if [ ! -n "$2" ]; then
echo ""
read -p "select build? [(a)ll/(u)pdate/(z)Image default:update] " BUILD_SELECT
else
BUILD_SELECT=$2
fi
# copy initramfs
echo ""
echo "=====> copy initramfs"
cpoy_initramfs
# make start
if [ "$BUILD_SELECT" = 'all' -o "$BUILD_SELECT" = 'a' ]; then
echo ""
echo "=====> cleaning"
make O=$OBJ_DIR clean
cp -f ./arch/arm/configs/$BUILD_DEFCONFIG $OBJ_DIR/.config
make -C $PWD O=$OBJ_DIR oldconfig || exit -1
fi
if [ "$BUILD_SELECT" != 'zImage' -a "$BUILD_SELECT" != 'z' ]; then
echo ""
echo "=====> build start"
if [ -e make.log ]; then
mv make.log make_old.log
fi
nice -n 10 make O=$OBJ_DIR -j12 2>&1 | tee make.log
fi
# check compile error
COMPILE_ERROR=`grep 'error:' ./make.log`
if [ "$COMPILE_ERROR" ]; then
echo ""
echo "=====> ERROR"
grep 'error:' ./make.log
exit -1
fi
# *.ko replace
find $OBJ_DIR -name '*.ko' -exec cp -av {} $INITRAMFS_TMP_DIR/lib/modules/ \;
# build zImage
echo ""
echo "=====> make zImage"
nice -n 10 make O=$OBJ_DIR -j2 zImage CONFIG_INITRAMFS_SOURCE="$INITRAMFS_TMP_DIR" CONFIG_INITRAMFS_ROOT_UID=`id -u` CONFIG_INITRAMFS_ROOT_GID=`id -g` || exit 1
if [ ! -e $OUTPUT_DIR ]; then
mkdir -p $OUTPUT_DIR
fi
echo ""
echo "=====> CREATE RELEASE IMAGE"
# clean release dir
if [ `find $BIN_DIR -type f | wc -l` -gt 0 ]; then
rm $BIN_DIR/*
fi
# copy zImage
cp $OBJ_DIR/arch/arm/boot/zImage $BIN_DIR/zImage
cp $OBJ_DIR/arch/arm/boot/zImage ./out/
echo " $BIN_DIR/zImage"
echo " out/zImage"
# create odin image
cd $KERNEL_DIR/$BIN_DIR
tar cf $BUILD_LOCALVERSION-odin.tar zImage
md5sum -t $BUILD_LOCALVERSION-odin.tar >> $BUILD_LOCALVERSION-odin.tar
mv $BUILD_LOCALVERSION-odin.tar $BUILD_LOCALVERSION-odin.tar.md5
echo " $BIN_DIR/$BUILD_LOCALVERSION-odin.tar.md5"
# create cwm image
cd $KERNEL_DIR/$BIN_DIR
if [ -d tmp ]; then
rm -rf tmp
fi
mkdir -p ./tmp/META-INF/com/google/android
cp zImage ./tmp/
cp $KERNEL_DIR/release-tools/update-binary ./tmp/META-INF/com/google/android/
sed -e "s/@VERSION/$BUILD_LOCALVERSION/g" $KERNEL_DIR/release-tools/updater-script.sed > ./tmp/META-INF/com/google/android/updater-script
cd tmp && zip -rq ../cwm.zip ./* && cd ../
SIGNAPK_DIR=$KERNEL_DIR/release-tools/signapk
java -jar $SIGNAPK_DIR/signapk.jar $SIGNAPK_DIR/testkey.x509.pem $SIGNAPK_DIR/testkey.pk8 cwm.zip $BUILD_LOCALVERSION-signed.zip
rm cwm.zip
rm -rf tmp
echo " $BIN_DIR/$BUILD_LOCALVERSION-signed.zip"
# rename zImage for multiboot
if [ "$BUILD_TARGET" = "MULTI" ]; then
echo " rename $BIN_DIR/zImage => $BIN_DIR/zImage_gb"
cp $BIN_DIR/zImage $BIN_DIR/zImage_gb
fi
cd $KERNEL_DIR
echo ""
echo "=====> BUILD COMPLETE $BUILD_KERNELVERSION-$BUILD_LOCALVERSION"
exit 0
|
sakuramilk/sc02c_kernel_gb
|
_build.sh
|
Shell
|
gpl-2.0
| 4,429 |
#!/bin/bash
# Check permission
if [ "$UID" != 0 ]; then
echo "Must be root to run this script."
fi
# Part 1
function run_part_1 {
useradd student; passwd student; echo $SHELL; who; who -q; who -b; date; cal -m 1 2003; cal -y 2003; su student;
exit; # Return to root
}
# Part 2
function run_part_2 {
pwd; echo $PWD;
cd ~
echo $HOME; mkdir ABC; touch abc;
ls -r; ls -l; ls --format=horizontal; ls -a;
cat abc
cd ~
rm -i ./abc
rmdir ABC # Generally, we use 'rm -R' to delete a folder
}
# Part 3
function run_part_3 {
cd ~
mkdir memos
echo "test" >> myfile # Write string to target file
cat myfile >> large
cp * ./memos/
ln large large.old; mv large large.new; mv large.new memos/large;
tail -n 5 large; head -n 5 large; tail -c 10 large >> newfile;
more myfile; less myfile;
wc -l myfile
cd ~
find ./ -ctime 7 -name "*" > 7days
find ./ -name "passwd"
find / -atime 7
paste large1 myfile>myfile2
ps -A | grep httpd # A demo of grep
}
# Params
echo -e "This is an example of Experiment 1"
echo -e "Please choose a part to run"
read choice;
if [[ $choice == "1" ]]; then run_part_1
elif [[ $choice == "2" ]]; then run_part_2
elif [[ $choice == "3" ]]; then run_part_3
else
echo "Not Found!"
fi
|
dstsmallbird/OSExpriment
|
exp1/exp1.sh
|
Shell
|
gpl-2.0
| 1,221 |
#!/bin/bash
for RANGE in 0x00A0:0xD7FF 0xE000:0xFDCF 0xFDF0:0xFFFD \
0x10000:0x1FFFD 0x20000:0x2FFFD \
0x30000:0x3FFFD 0x40000:0x4FFFD \
0x50000:0x5FFFD 0x60000:0x6FFFD \
0x70000:0x7FFFD 0x80000:0x8FFFD \
0x90000:0x9FFFD 0xA0000:0xAFFFD \
0xB0000:0xBFFFD 0xC0000:0xCFFFD \
0xD0000:0xDFFFD 0xE0000:0xEFFFD \
0xF0000:0xFFFFD 0x1000000:0x10FFFD
do
(
cat <<END
#\#CIF_2.0
data_all_allowed_Unicode
END
perl <<PERLSCRIPT
use strict;
use warnings;
binmode STDOUT, "utf8";
my( \$s, \$e ) = split ':', "${RANGE}";
\$s = hex \$s;
\$e = hex \$e;
printf '_start_range_%04X "', \$s;
for my \$i (\$s..\$e) {
if( (\$i & 0x0F) == 0 ) {
printf "\"\n_values_from_%04X \"", \$i;
}
print chr( \$i );
}
print "\"\n";
PERLSCRIPT
) | ./cifparse
done
|
sauliusg/cod-tools
|
src/components/codcif/tests/cifparse_135.sh
|
Shell
|
gpl-2.0
| 900 |
#!/bin/bash
# **********************************************************
# maj_ff_iceweasel.sh
# Script de rétrogradage de iceweasel-backports en version esr
# 20160316
# **********************************************************
#Couleurs
ROUGE="\\033[1;31m"
VERT="\\033[1;32m"
BLEU="\\033[1;34m"
JAUNE="\\033[1;33m"
COLTITRE="\033[1;35m" # Rose
COLDEFAUT="\033[0;33m" # Brun-jaune
COLCMD="\033[1;37m" # Blanc
COLERREUR="\033[1;31m" # Rouge
COLTXT="\033[0;37m" # Gris
COLINFO="\033[0;36m" # Cyan
COLPARTIE="\033[1;34m" # Bleu
# On rend le script "cretin-resistant"
[ -e /var/www/se3 ] && echo "Malheureux... Ce script est à exécuter sur les clients Linux, pas sur le serveur !" && exit 1
# Au cas ou dpkg aurait été interrompu :
dpkg --configure -a
# Test et désinstallation éventuelle de iceweasel-release
if [ -e "/etc/apt/sources.list.d/mozbackports.list" ]; then
echo -e "$COLINFO"
echo "mozbackports.list existe,"
echo -e "$COLTXT"
test_moz_1=$(cat /etc/apt/sources.list.d/mozbackports.list | grep "^deb http")
if [ -n "$test_moz_1" ] ; then
sed -i 's/^deb\ http:\/\/mozilla.debian/#deb\ http:\/\/mozilla.debian/g' /etc/apt/sources.list.d/mozbackports.list
sed -i 's/iceweasel/firefox/g' /etc/apt/sources.list.d/mozbackports.list
echo -e "$COLINFO"
echo "mozbackports.list modifié."
echo -e "$COLDEFAUT"
echo "On désinstalle la version actuellement installée..."
echo -e "$COLTXT"
apt-get remove -y iceweasel iceweasel-l10n-fr
else
echo -e "$COLINFO"
echo "mozbackports.list a déjà été modifié"
echo -e "$COLTXT"
fi
else
TEST_MOZ=$(cat /etc/apt/sources.list | grep "^deb http://mozilla.debian.net")
if [ -n "$TEST_MOZ" ] ; then
sed -i 's/^deb\ http:\/\/mozilla.debian/#deb\ http:\/\/mozilla.debian/g' /etc/apt/sources.list
sed -i 's/iceweasel/firefox/g' /etc/apt/sources.list
echo -e "$COLINFO"
echo "sources.list modifié."
echo -e "$COLDEFAUT"
echo "On désinstalle la version actuellement installée..."
echo -e "$COLTXT"
apt-get remove -y iceweasel iceweasel-l10n-fr
else
echo -e "$COLINFO"
echo "sources.list a déjà été modifié."
echo -e "$COLTXT"
fi
echo -e "$COLINFO"
echo "Rien à faire."
echo -e "$COLTXT"
fi
# Mise à jour des paquets
echo -e "$COLINFO"
echo "Mise à jour des paquets..."
echo -e "$COLTXT"
apt-get update
echo -e "$COLINFO"
echo "Installation ou mise à jour d'iceweasel..."
echo -e "$COLTXT"
apt-get install -y iceweasel iceweasel-l10n-fr
echo -e "$VERT"
echo "Installation terminée."
echo -e "$COLTXT"
|
jcmousse/clinux
|
se3/alancer/maj_ff_iceweasel.sh
|
Shell
|
gpl-2.0
| 2,506 |
#!/bin/sh
ip=$4
sed -i '' -e "/${ip}/d" /tmp/ip_activity_pppoe
sed -i '' -e "/${ip}/d" /tmp/ip_activity
exit 0
|
mysticall/imslu
|
conf/freebsd/usr/local/etc/imslu/scripts/pppoe_link_down.sh
|
Shell
|
gpl-2.0
| 112 |
#!/bin/sh
# Cause I'm very, very lazy ; )
./clean.sh
echo "> Adding EVERYTHING in folder to"
echo " SVN version control!"
svn add * >> /dev/null 2>&1
svn add */* >> /dev/null 2>&1
svn add */*/* >> /dev/null 2>&1
svn add */*/*/* >> /dev/null 2>&1
svn add */*/*/*/* >> /dev/null 2>&1
svn add */*/*/*/*/* >> /dev/null 2>&1
svn add */*/*/*/*/*/* >> /dev/null 2>&1
svn add */*/*/*/*/*/*/* >> /dev/null 2>&1
svn add */*/*/*/*/*/*/*/* >> /dev/null 2>&1
svn add */*/*/*/*/*/*/*/*/* >> /dev/null 2>&1
svn add */*/*/*/*/*/*/*/*/*/* >> /dev/null 2>&1
svn add */*/*/*/*/*/*/*/*/*/*/* >> /dev/null 2>&1
svn add */*/*/*/*/*/*/*/*/*/*/*/* >> /dev/null 2>&1
svn add */*/*/*/*/*/*/*/*/*/*/*/*/* >> /dev/null 2>&1
svn add */*/*/*/*/*/*/*/*/*/*/*/*/*/* >> /dev/null 2>&1
|
ProjectZeroSlackr/ProjectZeroSlackr-SVN
|
svn-add-all.sh
|
Shell
|
gpl-2.0
| 753 |
#!/bin/bash
# Module spécifique à Archlinux
# ------------------------------------------------------------------------------
Titre="Installation ${bold}arch${offbold}${blue}linux${Reset}"
TypeFile='bash' # Ne seront concerné que ce type de fichier
Appli='Archlinux'
#
# ------------------------------------------------------------------------------
# Structure Directories
# ------------------------------------------------------------------------------
DirArch="$HOME/workspace/archlinux/installation-guide"
DirMenu="$DirArch/contents"
#
# ------------------------------------------------------------------------------
# archlinux
# |
# |
# `-- installation-guide
# |
# |-- contents [ Lignes du menu sans .bash et _ ]
# | |-- 0.+.Initialisation.bash
# | |-- 1.*_Pre-installation.bash
# | |-- 1.1_Set_the_keyboard_layout.bash
# | |-- 1.2_Verify_the_boot_mode.bash
# | ...
# ------------------------------------------------------------------------------
# $OUTILSRC/typ/archlinux.bash
|
RC69/RCsite1
|
outilsRC/app/archlinux.bash
|
Shell
|
gpl-2.0
| 1,879 |
#!/bin/sh
# Copyright (C) 1999-2005 ImageMagick Studio LLC
#
# This program is covered by multiple licenses, which are described in
# LICENSE. You should have received a copy of LICENSE with this
# package; otherwise see http://www.imagemagick.org/script/license.php.
. ${srcdir}/tests/common.shi
${RUNENV} ${MEMCHECK} ./rwfile ${SRCDIR}/input_truecolor10.dpx EPSI
|
atmark-techno/atmark-dist
|
user/imagemagick/tests/rwfile_EPSI_truecolor10.sh
|
Shell
|
gpl-2.0
| 366 |
make ARCH=arm CROSS_COMPILE= 'HOSTCC=ccache /usr/bin/gcc -B/usr/bin/' uImage
|
wangxingchao/oriole
|
buImage.sh
|
Shell
|
gpl-2.0
| 77 |
#!/bin/bash
#
# Copyright (C) 2010-2012 Eugen Feller, INRIA <[email protected]>
#
# This file is part of Snooze, a scalable, autonomic, and
# energy-aware virtual machine (VM) management framework.
#
# This program is free software: you can redistribute it and/or
# modify it under the terms of the GNU General Public License
# as published by the Free Software Foundation, either version 2
# of the License, or (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, see <http://www.gnu.org/licenses>.
#
perform_virtual_cluser_tasks ()
{
echo "$log_tag Creating virtual cluster, propagating images, and starting"
prepare_and_create_virtual_cluster $1 $2
propagate_base_image
propagate_virtual_cluster $1
start_virtual_cluster $1
}
configure_mapreduce ()
{
case "$1" in
'one_data') echo "$log_tag Configuring MapReduce with one data node VM per physical machine"
$python "$mapreduce_filter_compute_and_data_script" $snoozeclient_output_formatted $mapreduce_data_nodes_file $mapreduce_compute_nodes_file
$python "$mapreduce_script" "mapreduce_separatedata" "--data" `cat $mapreduce_data_nodes_file` "--compute" `cat $mapreduce_compute_nodes_file`
local master_node=$(get_first_host `cat $mapreduce_data_nodes_file`)
echo $master_node > $mapreduce_master_node
;;
'variable_data') echo "$log_tag Configuring MapReduce with variable number of compute and data VMs"
echo "$log_tag Number of data nodes:"
read number_of_data_nodes
echo "$log_tag Number of compute nodes:"
read number_of_compute_nodes
data_nodes=`cat $virtual_machine_hosts | sed -n 1,"$number_of_data_nodes"p`
number_of_virtual_machines=$(get_number_of_virtual_machines)
compute_nodes=`cat $virtual_machine_hosts | sed -n $(($number_of_data_nodes+1)),"$number_of_virtual_machines"p`
$python "$mapreduce_script" "mapreduce_separatedata" "--data" $data_nodes "--compute" $compute_nodes
local master_node=$(get_first_host $data_nodes)
echo $master_node > $mapreduce_master_node
;;
'normal')
local hosts_list=$(get_virtual_machine_hosts)
echo "$log_tag Configuring MapReduce in normal mode on: $hosts_list"
$python "$mapreduce_script" "mapreduce_normal" "--hosts" $hosts_list
local master_node=$(get_first_host $hosts_list)
echo $master_node > $mapreduce_master_node
;;
*) echo "$log_tag Unknown command received!"
;;
esac
}
start_mapreduce_test_case ()
{
case "$1" in
'start')
echo "$log_tag Cluster name:"
read cluster_name
echo "$log_tag Number of VMs:"
read number_of_vms
perform_virtual_cluser_tasks $cluster_name $number_of_vms
;;
'storage')
local hosts_list=$(get_virtual_machine_hosts)
$python $mapreduce_script "storage" "--hosts" $hosts_list "--job_id" $mapreduce_storage_jobid
;;
'configure')
echo "$log_tag Configuration mode (normal, one_data, variable_data):"
read configuration_mode
configure_mapreduce $configuration_mode
;;
'benchmark')
echo "$log_tag Benchmark name (e.g. dfsio, dfsthroughput, mrbench, nnbench, pi, teragen, terasort, teravalidate, censusdata, censusbench, wikidata, wikibench):"
read benchmark_name
local master_node=$(get_hadoop_master_node)
$python "$mapreduce_script" "benchmark" "--name" $benchmark_name "--master" $master_node
;;
*) echo "$log_tag Unknown command received!"
;;
esac
}
|
efeller/snoozedeploy
|
grid5000/experiments/scripts/mapreduce_test_case.sh
|
Shell
|
gpl-2.0
| 3,927 |
#!/bin/bash
# Renew the certificate
certbot renew --preferred-challenges http
for cert in /etc/letsencrypt/live/*
do
if [ -d "$cert" ]
then
cat $cert/fullchain.pem $cert/privkey.pem > /opt/ssl/$(echo $cert | cut -d '/' -f 5).pem
fi
done
|
acc61287/ScriptTools
|
update-certs.sh
|
Shell
|
gpl-2.0
| 271 |
#!/bin/bash
cd /tmp
iozone -a > /unacloud/cluster/results`hostname`.txt
|
UnaCloud/unacloudIaaS1.0
|
escritorio/runIozone.sh
|
Shell
|
gpl-2.0
| 71 |
#
# FILE DISCONTINUED HERE
# UPDATED VERSION AT
# https://gitlab.com/yeupou/stalag13/raw/master/usr/local/bin/gpg-grabsub.sh
#
# | |
# \_V_//
# \/=|=\/
# [=v=]
# __\___/_____
# /..[ _____ ]
# /_ [ [ M /] ]
# /../.[ [ M /@] ]
# <-->[_[ [M /@/] ]
# /../ [.[ [ /@/ ] ]
# _________________]\ /__/ [_[ [/@/ C] ]
# <_________________>>0---] [=\ \@/ C / /
# ___ ___ ]/000o /__\ \ C / /
# \ / /....\ \_/ /
# ....\||/.... [___/=\___/
# . . . . [...] [...]
# . .. . [___/ \___]
# . 0 .. 0 . <---> <--->
# /\/\. . . ./\/\ [..] [..]
#
#!/bin/bash
#
# Copyright (c) 2015 Mathieu Roy <yeupou--gnu.org>
# http://yeupou.wordpress.com
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
# USA
red="\e[31m"
yellow="\e[33m"
cyan="\e[36m"
bold="\e[1m"
reset="\e[0m"
echo -e "${red}This script assumes that you already set up a primary key and sub keys"
echo -e "(one to sign, one to en/decrypt)${reset}"
# gpg dir should not already exists
dir=~/.gnupg
if [ -d "$dir" ]; then echo "$dir already exists, we wont mess with it" && exit 1; fi
# get hostname of the should be secured box
echo "Master key host to contact via SSH?"
read host
echo -e "${cyan}Keys:${reset}"
ssh $host 'gpg --list-key'
# set the primary key
echo -e "Primary key id? (pub 4096R/${yellow}??????????${reset})"
read primary
# local import keys
ssh $host 'gpg --export-secret-key --armor' | gpg --import -
# remove the secret key of the primary
echo -e "${cyan}Removing the primary key from the set, approve please...${reset}"
temp=$(mktemp)
gpg --export-secret-subkeys $primary > $temp
gpg --delete-secret-keys $primary
gpg --import $temp
rm -f $temp
gpg --list-keys
# set a local password
echo -e "${cyan}Set a new local password that will differ from the primary and save:${reset}"
gpg --edit-key $primary passwd
# EOF
|
yeupou/stalag13
|
usr/local/bin/gpg-grabsub.sh
|
Shell
|
gpl-2.0
| 2,933 |
#!/bin/sh
#
# Copyright (c) International Business Machines Corp., 2003
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License along
# with this program; if not, write to the Free Software Foundation, Inc.,
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
#
# Written by Prakash Narayana ([email protected])
# and Michael Reed ([email protected])
#
# A script that will test isofs on Linux system.
# It makes ISO9660 file system with different options and also
# mounts the ISO9660 file system with different mount options.
#
TCID=isofs
TST_TOTAL=77
. test.sh
NO_CLEANUP=""
usage()
{
echo "USAGE: $0 <optional> -n -h"
exit
}
cleanup()
{
if [ "$NO_CLEANUP" = "no" ]; then
tst_resm TINFO "Temporary directory $PWD was not removed"
else
tst_rmdir
fi
}
max_depth=3
max_dirs=4
gen_fs_tree()
{
local cur_path="$1"
local cur_depth="$2"
if [ "$cur_depth" -gt "$max_depth" ]; then
return
fi
for i in $(seq 1 $max_dirs); do
local new_path="$cur_path/subdir_$i"
mkdir -p "$new_path"
dd if=/dev/urandom of="$new_path/file" bs=1024 count=100 &> /dev/null
gen_fs_tree "$new_path" $((cur_depth + 1))
done
}
while getopts :hnd: arg; do
case $arg in
h)
echo ""
echo "n - The directories created will not be removed"
echo "h - Help options"
echo ""
usage
echo ""
;;
n)
NO_CLEANUP="no"
;;
esac
done
tst_require_root
tst_tmpdir
TST_CLEANUP=cleanup
MNT_POINT="$PWD/mnt"
MAKE_FILE_SYS_DIR="$PWD/files"
mkdir -p -m 777 $MNT_POINT
mkdir -p $MAKE_FILE_SYS_DIR
# Generated directories and files
mkdir -p $MAKE_FILE_SYS_DIR
gen_fs_tree "$MAKE_FILE_SYS_DIR" 1
# Make ISO9660 file system with different options.
# Mount the ISO9660 file system with different mount options.
for mkisofs_opt in \
" " \
"-J" \
"-hfs -D" \
" -R " \
"-R -J" \
"-f -l -D -J -L -R" \
"-allow-lowercase -allow-multidot -iso-level 3 -f -l -D -J -L -R"
do
rm -f isofs.iso
mkisofs -o isofs.iso -quiet $mkisofs_opt $MAKE_FILE_SYS_DIR 2> /dev/null
if [ $? -eq 0 ]; then
tst_resm TPASS \
"mkisofs -o isofs.iso -quiet $mkisofs_opt $MAKE_FILE_SYS_DIR"
else
tst_resm TFAIL \
tst_resm TFAIL "mkisofs -o isofs.iso -quiet $mkisofs_opt $MAKE_FILE_SYS_DIR"
continue
fi
for mount_opt in \
"loop" \
"loop,norock" \
"loop,nojoliet" \
"loop,block=512,unhide" \
"loop,block=1024,cruft" \
"loop,block=2048,nocompress" \
"loop,check=strict,map=off,gid=bin,uid=bin" \
"loop,check=strict,map=acorn,gid=bin,uid=bin" \
"loop,check=relaxed,map=normal" \
"loop,block=512,unhide,session=2"
# "loop,sbsector=32"
do
mount -t iso9660 -o $mount_opt isofs.iso $MNT_POINT
if [ $? -ne 0 ]; then
tst_resm TFAIL \
"mount -t iso9660 -o $mount_opt isofs.iso $MNT_POINT"
continue
fi
ls -lR $MNT_POINT > /dev/null
if [ $? -ne 0 ]; then
tst_resm TFAIL "ls -lR $MNT_POINT"
fi
umount $MNT_POINT
if [ $? -ne 0 ]; then
tst_brkm TFAIL "umount $MNT_POINT"
fi
tst_resm TPASS "mount/umount with \"$mount_opt\" options"
done
done
tst_exit
|
Havner/ltp
|
testcases/kernel/fs/iso9660/isofs.sh
|
Shell
|
gpl-2.0
| 3,517 |
#!/bin/bash
# Install isutf8 program (from package "moreutils" at least in linux mint)
# in order to use this script
#
# This script assumes that the current working directory is the root of the
# wesnoth repository.
set -e
find src/ -type f -print0 | xargs -0 isutf8 --
find data/ -not -name "*.png" -not -name "*.ogg" -not -name "*.jpg" -not -name "*.wav" -not -name "*.gif" -not -name "*.xcf" -type f -print0 | xargs -0 isutf8 --
find po/ -type f -print0 | xargs -0 isutf8 --
|
dailin/wesnoth
|
utils/travis/check_utf8.sh
|
Shell
|
gpl-2.0
| 480 |
#!/bin/bash
### BEGIN INIT INFO
# Provides: gvd
# Required-Start: $network
# Required-Stop: $network
# Default-Start: 2 3 4 5
# Default-Stop: 0 1 6
# Short-Description: start GaVer daemon (gvd)
### END INIT INFO
#
# Load the module to parse the config file
#
if [ ! -f /opt/gaver/bin/config-parser.sh ]
then
echo "Config Parser Not Found, please check the instalation";
exit 0;
fi
source /opt/gaver/bin/config-parser.sh;
CONFIG_FILE="/opt/gaver/etc/gvd.ini"
if [ ! -f $CONFIG_FILE ]
then
echo "Config File Not Found ($CONFIG_FILE)";
exit 0;
fi
config_parser $CONFIG_FILE;
# Parse Config file
config.section.Bin;
bin=$gvd;
pid=$pid;
config.section.GaVer;
cfg_addr=$addr;
cfg_port=$port;
cfg_mtu=$mtu;
cfg_os=$overal_bps;
cfg_ss=$socket_bps;
cfg_rmem=$rmem;
cfg_wmem=$wmem;
cfg_netstat=$netstat;
cfg_error=$error;
config.section.Api;
cfg_listen=$listen_api;
# Ser if the daemon are there
test -x $bin || exit 0
function make_arg()
{
args="";
if [ "$cfg_addr" != "" ]
then
args=$args"-a $cfg_addr "
fi
if [ "$cfg_port" != "" ]
then
args=$args"-p $cfg_port "
fi
if [ "$cfg_mtu" != "" ]
then
args=$args"-m $cfg_mtu "
fi
if [ "$cfg_os" != "" ]
then
args=$args"-s $cfg_os "
fi
if [ "$cfg_ss" != "" ]
then
args=$args"-S $cfg_ss "
fi
if [ "$cfg_rmem" != "" ]
then
args=$args"-r $cfg_rmem "
fi
if [ "$cfg_wmem" != "" ]
then
args=$args"-w $cfg_wmem "
fi
if [ "$cfg_listen" != "" ]
then
args=$args"-l $cfg_listen "
fi
if [ "$pid" != "" ]
then
args=$args"-P $pid "
fi
if [ "$cfg_netstat" != "" ]
then
args=$args"-n $cfg_netstat "
fi
if [ "$cfg_error" != "" ]
then
args=$args"-e $cfg_error "
fi
echo $args
}
ARG=`make_arg`
if [ $# -eq 2 ]
then
if [ $2 == "debug" ]
then
echo $ARG
exit 0
fi
fi
case $1 in
start)
echo "Starting GaVer"
start-stop-daemon --start --exec $bin --pidfile $pid --umask 022 -- $ARG
;;
stop)
echo "Stoping GaVer"
start-stop-daemon --stop --pidfile $pid
if [ $? == "0" ]
then
rm -f $pid
fi
;;
*)
echo "Usage: /etc/init.d/gaverd {start|stop}"
exit 1
;;
esac
|
emilianobilli/gaver
|
script/gaverd.sh
|
Shell
|
gpl-2.0
| 2,219 |
#!/bin/bash
#echo "Change start-ap-managed-wifi.sh."
#echo "Example for wlan1 as AP: bash set-router.sh wlan1"
router=$1
oldline=$(grep -F 'router=' ~/.openplotter/Network/.openplotter/start-ap-managed-wifi.sh)
newline="router=${router}"
sudo sed -i "s/${oldline}/${newline}/g" ~/.openplotter/Network/.openplotter/start-ap-managed-wifi.sh
|
e-sailing/openplotter
|
Network/set-router.sh
|
Shell
|
gpl-2.0
| 341 |
#!/bin/bash
# Script for manual Date Input and Graph & HTML export
#Show Year for Typeerrors Debug
year="2016"
#Ask for the Day to Generate the Graph and Data
read -p "Please give in YYYY-MM-DD:" date
echo "You use: "$date" for Export! In the Year "$year" !"
#Import from YOUR File ! You have to edit them manual!
cat speedtestausgabe.csv | grep $date > $date".csv"
mv $date.csv /home/pi/auto-speedtest/Graph-Builder/test.csv
cd /home/pi/auto-speedtest/Graph-Builder/
python3 graph-builder.py
mv download.png $date"-download.png"
mv upload.png $date"-upload.png"
mv ping.png $date"-ping.png"
mv test.csv $date".csv"
#Todo: File Upload on SFTP in Folder
#Todo: HTML input after SFTP Transfer (PHP Include via Text Document ?)
#Sort 4 HTML Export
html1="<tr><th><h2>Wochentag<br>"$date"</h2></th>"
html2='<th><a href="/'
html3=$year"/"$date"-download.png"
html4='"><img src="/'
html5=$year"/"$date"-download.png"
html6='" width="300" height="200" alt="DownloadGraphic"></a></th>'
html7='<th><a href="/'
html8=$year"/"$date"-upload.png"
html9='"><img src="/'
html10=$year"/"$date"-upload.png"
html11='" width="300" height="200" alt="UploadGraphic"></a></th>'
html12='<th><a href="/'
html13=$year"/"$date"-ping.png"
html14='"><img src="/'
html15=$year"/"$date-"ping.png"
html16='" width="300" height="200" alt="PingGraphic"></a></th>'
html17='<th><a href="/'
html18=$year"/"$date".csv"
html19='">CSV-Link</a></th></tr>'
#Export HTML to put in in a Website
echo $html1$html2$html3$html4$html5$html6$html7$html8$html9$html10$html11$html12$html13$html14$html15$html16$html17$html18$html19
|
Wlanfr3ak/auto-speedtest
|
generator.sh
|
Shell
|
gpl-2.0
| 1,586 |
#!/bin/bash
DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
DEDOP_BIN="$( cd "${DIR}/../../.." && pwd )"
open "${DEDOP_BIN}/dedop-shell.command"
|
DeDop/dedop-conda
|
recipe/dedop-shell.app/Contents/MacOS/launch-dedop-shell-in-terminal.sh
|
Shell
|
gpl-3.0
| 156 |
#!/bin/bash
# action=test #train # plot
# for trv in v0 v1 v2 v3; do
# trlabel=dtr-train-$trv
# common=" --training-label $trlabel --n-max-queries 150000 --n-max-procs 7" # --cgroup among-families --tvar affinity"# ; trseed=0 --training-seed $trseed
# ./test/dtr-scan.py $action --label dtr-train-v3 $common
# done
# exit 0
action=plot #test # train
for cg in within-families among-families; do
for tv in affinity delta-affinity; do
lfn=_output/dtr-scan/$cg-$tv.txt
echo "" >$lfn
for trv in v0 v1 v2 v3; do
trlabel=dtr-train-$trv
common=" --training-label $trlabel --n-max-queries 150000 --n-max-procs 7 --cgroup $cg --tvar $tv" # ; trseed=0 --training-seed $trseed
./test/dtr-scan.py $action --label dtr-train-v0 $common >>$lfn
./test/dtr-scan.py $action --label dtr-train-v1 $common >>$lfn
./test/dtr-scan.py $action --label dtr-train-v2 $common >>$lfn
./test/dtr-scan.py $action --label dtr-train-v3 $common >>$lfn
done
done
done
|
psathyrella/partis
|
bin/run-dtr-scan.sh
|
Shell
|
gpl-3.0
| 992 |
#!/bin/bash
set -eux
. $TESTSLIB/apt.sh
update_core_snap_for_classic_reexec() {
# it is possible to disable this to test that snapd (the deb) works
# fine with whatever is in the core snap
if [ "$MODIFY_CORE_SNAP_FOR_REEXEC" != "1" ]; then
echo "Not modifying the core snap as requested via MODIFY_CORE_SNAP_FOR_REEXEC"
return
fi
# We want to use the in-tree snap/snapd/snap-exec/snapctl, because
# we re-exec by default.
# To accomplish that, we'll just unpack the core we just grabbed,
# shove the new snap-exec and snapctl in there, and repack it.
# First of all, unmount the core
core="$(readlink -f /snap/core/current || readlink -f /snap/ubuntu-core/current)"
snap="$(mount | grep " $core" | awk '{print $1}')"
umount --verbose "$core"
# Now unpack the core, inject the new snap-exec/snapctl into it
unsquashfs "$snap"
cp /usr/lib/snapd/snap-exec squashfs-root/usr/lib/snapd/
cp /usr/bin/snapctl squashfs-root/usr/bin/
# also inject new version of snap-confine and snap-scard-ns
cp /usr/lib/snapd/snap-discard-ns squashfs-root/usr/lib/snapd/
cp /usr/lib/snapd/snap-confine squashfs-root/usr/lib/snapd/
# also add snap/snapd because we re-exec by default and want to test
# this version
cp /usr/lib/snapd/snapd squashfs-root/usr/lib/snapd/
cp /usr/lib/snapd/info squashfs-root/usr/lib/snapd/
cp /usr/bin/snap squashfs-root/usr/bin/snap
# repack, cheating to speed things up (4sec vs 1.5min)
mv "$snap" "${snap}.orig"
if [[ "$SPREAD_SYSTEM" == ubuntu-14.04-* ]]; then
# trusty does not support -Xcompression-level 1
mksquashfs squashfs-root "$snap" -comp gzip
else
mksquashfs squashfs-root "$snap" -comp gzip -Xcompression-level 1
fi
rm -rf squashfs-root
# Now mount the new core snap
mount "$snap" "$core"
# Make sure we're running with the correct copied bits
for p in /usr/lib/snapd/snap-exec /usr/lib/snapd/snap-confine /usr/lib/snapd/snap-discard-ns /usr/bin/snapctl /usr/lib/snapd/snapd /usr/bin/snap; do
if ! cmp ${p} ${core}${p}; then
echo "$p in tree and $p in core snap are unexpectedly not the same"
exit 1
fi
done
}
prepare_each_classic() {
mkdir -p /etc/systemd/system/snapd.service.d
if [ -z "${SNAP_REEXEC:-}" ]; then
rm -f /etc/systemd/system/snapd.service.d/reexec.conf
else
cat <<EOF > /etc/systemd/system/snapd.service.d/reexec.conf
[Service]
Environment=SNAP_REEXEC=$SNAP_REEXEC
EOF
fi
}
prepare_classic() {
apt_install_local ${GOPATH}/snapd_*.deb
if snap --version |MATCH unknown; then
echo "Package build incorrect, 'snap --version' mentions 'unknown'"
snap --version
apt-cache policy snapd
exit 1
fi
if /usr/lib/snapd/snap-confine --version | MATCH unknown; then
echo "Package build incorrect, 'snap-confine --version' mentions 'unknown'"
/usr/lib/snapd/snap-confine --version
apt-cache policy snap-confine
exit 1
fi
mkdir -p /etc/systemd/system/snapd.service.d
cat <<EOF > /etc/systemd/system/snapd.service.d/local.conf
[Unit]
StartLimitInterval=0
[Service]
Environment=SNAPD_DEBUG_HTTP=7 SNAPD_DEBUG=1 SNAPPY_TESTING=1
EOF
mkdir -p /etc/systemd/system/snapd.socket.d
cat <<EOF > /etc/systemd/system/snapd.socket.d/local.conf
[Unit]
StartLimitInterval=0
EOF
if [ "$REMOTE_STORE" = staging ]; then
. $TESTSLIB/store.sh
setup_staging_store
fi
# Snapshot the state including core.
if [ ! -f $SPREAD_PATH/snapd-state.tar.gz ]; then
! snap list | grep core || exit 1
# use parameterized core channel (defaults to edge) instead
# of a fixed one and close to stable in order to detect defects
# earlier
snap install --${CORE_CHANNEL} core
snap list | grep core
# ensure no auto-refresh happens during the tests
snap set core refresh.disabled=true
echo "Ensure that the grub-editenv list output is empty on classic"
output=$(grub-editenv list)
if [ -n "$output" ]; then
echo "Expected empty grub environment, got:"
echo "$output"
exit 1
fi
systemctl stop snapd.service snapd.socket
update_core_snap_for_classic_reexec
systemctl daemon-reload
mounts="$(systemctl list-unit-files | grep '^snap[-.].*\.mount' | cut -f1 -d ' ')"
services="$(systemctl list-unit-files | grep '^snap[-.].*\.service' | cut -f1 -d ' ')"
for unit in $services $mounts; do
systemctl stop $unit
done
tar czf $SPREAD_PATH/snapd-state.tar.gz /var/lib/snapd /snap /etc/systemd/system/snap-*core*.mount
systemctl daemon-reload # Workaround for http://paste.ubuntu.com/17735820/
for unit in $mounts $services; do
systemctl start $unit
done
systemctl start snapd.socket
fi
}
setup_reflash_magic() {
# install the stuff we need
apt-get install -y kpartx busybox-static
apt_install_local ${GOPATH}/snapd_*.deb
apt-get clean
snap install --${CORE_CHANNEL} core
# install ubuntu-image
snap install --devmode --edge ubuntu-image
# needs to be under /home because ubuntu-device-flash
# uses snap-confine and that will hide parts of the hostfs
IMAGE_HOME=/home/image
mkdir -p $IMAGE_HOME
# modify the core snap so that the current root-pw works there
# for spread to do the first login
UNPACKD="/tmp/core-snap"
unsquashfs -d $UNPACKD /var/lib/snapd/snaps/core_*.snap
# FIXME: netplan workaround
mkdir -p $UNPACKD/etc/netplan
# set root pw by concating root line from host and rest from core
want_pw="$(grep ^root /etc/shadow)"
echo "$want_pw" > /tmp/new-shadow
tail -n +2 /etc/shadow >> /tmp/new-shadow
cp -v /tmp/new-shadow $UNPACKD/etc/shadow
cp -v /etc/passwd $UNPACKD/etc/passwd
# ensure spread -reuse works in the core image as well
if [ -e /.spread.yaml ]; then
cp -av /.spread.yaml $UNPACKD
fi
# we need the test user in the image
# see the comment in spread.yaml about 12345
sed -i "s/^test.*$//" $UNPACKD/etc/{shadow,passwd}
chroot $UNPACKD addgroup --quiet --gid 12345 test
chroot $UNPACKD adduser --quiet --no-create-home --uid 12345 --gid 12345 --disabled-password --gecos '' test
echo 'test ALL=(ALL) NOPASSWD:ALL' >> $UNPACKD/etc/sudoers.d/99-test-user
echo 'ubuntu ALL=(ALL) NOPASSWD:ALL' >> $UNPACKD/etc/sudoers.d/99-ubuntu-user
# modify sshd so that we can connect as root
sed -i 's/\(PermitRootLogin\|PasswordAuthentication\)\>.*/\1 yes/' $UNPACKD/etc/ssh/sshd_config
# FIXME: install would be better but we don't have dpkg on
# the image
# unpack our freshly build snapd into the new core snap
dpkg-deb -x ${SPREAD_PATH}/../snapd_*.deb $UNPACKD
# add gpio and iio slots
cat >> $UNPACKD/meta/snap.yaml <<-EOF
slots:
gpio-pin:
interface: gpio
number: 100
direction: out
iio0:
interface: iio
path: /dev/iio:device0
EOF
# build new core snap for the image
snapbuild $UNPACKD $IMAGE_HOME
# FIXME: fetch directly once its in the assertion service
cp "$TESTSLIB/assertions/pc-${REMOTE_STORE}.model" $IMAGE_HOME/pc.model
# FIXME: how to test store updated of ubuntu-core with sideloaded snap?
IMAGE=all-snap-amd64.img
# ensure that ubuntu-image is using our test-build of snapd with the
# test keys and not the bundled version of usr/bin/snap from the snap.
# Note that we can not put it into /usr/bin as '/usr' is different
# when the snap uses confinement.
cp /usr/bin/snap $IMAGE_HOME
export UBUNTU_IMAGE_SNAP_CMD=$IMAGE_HOME/snap
# download pc-kernel snap for the specified channel
snap download --channel="$KERNEL_CHANNEL" pc-kernel
/snap/bin/ubuntu-image -w $IMAGE_HOME $IMAGE_HOME/pc.model \
--channel edge \
--extra-snaps $IMAGE_HOME/core_*.snap \
--extra-snaps $PWD/pc-kernel_*.snap \
--output $IMAGE_HOME/$IMAGE
rm ./pc-kernel*
# mount fresh image and add all our SPREAD_PROJECT data
kpartx -avs $IMAGE_HOME/$IMAGE
# FIXME: hardcoded mapper location, parse from kpartx
mount /dev/mapper/loop2p3 /mnt
mkdir -p /mnt/user-data/
cp -ar /home/gopath /mnt/user-data/
# create test user home dir
mkdir -p /mnt/user-data/test
# using symbolic names requires test:test have the same ids
# inside and outside which is a pain (see 12345 above), but
# using the ids directly is the wrong kind of fragile
chown --verbose test:test /mnt/user-data/test
# we do what sync-dirs is normally doing on boot, but because
# we have subdirs/files in /etc/systemd/system (created below)
# the writeable-path sync-boot won't work
mkdir -p /mnt/system-data/etc/systemd
(cd /tmp ; unsquashfs -v $IMAGE_HOME/core_*.snap etc/systemd/system)
cp -avr /tmp/squashfs-root/etc/systemd/system /mnt/system-data/etc/systemd/
# FIXUP silly systemd
mkdir -p /mnt/system-data/etc/systemd/system/snapd.service.d
cat <<EOF > /mnt/system-data/etc/systemd/system/snapd.service.d/local.conf
[Unit]
StartLimitInterval=0
[Service]
Environment=SNAPD_DEBUG_HTTP=7 SNAPD_DEBUG=1 SNAPPY_TESTING=1 SNAPPY_USE_STAGING_STORE=$SNAPPY_USE_STAGING_STORE
ExecStartPre=/bin/touch /dev/iio:device0
EOF
mkdir -p /mnt/system-data/etc/systemd/system/snapd.socket.d
cat <<EOF > /mnt/system-data/etc/systemd/system/snapd.socket.d/local.conf
[Unit]
StartLimitInterval=0
EOF
umount /mnt
kpartx -d $IMAGE_HOME/$IMAGE
# the reflash magic
# FIXME: ideally in initrd, but this is good enough for now
cat > $IMAGE_HOME/reflash.sh << EOF
#!/bin/sh -ex
mount -t tmpfs none /tmp
cp /bin/busybox /tmp
cp $IMAGE_HOME/$IMAGE /tmp
sync
# blow away everything
/tmp/busybox dd if=/tmp/$IMAGE of=/dev/sda bs=4M
# and reboot
/tmp/busybox sync
/tmp/busybox echo b > /proc/sysrq-trigger
EOF
chmod +x $IMAGE_HOME/reflash.sh
# extract ROOT from /proc/cmdline
ROOT=$(cat /proc/cmdline | sed -e 's/^.*root=//' -e 's/ .*$//')
cat >/boot/grub/grub.cfg <<EOF
set default=0
set timeout=2
menuentry 'flash-all-snaps' {
linux /vmlinuz root=$ROOT ro init=$IMAGE_HOME/reflash.sh console=ttyS0
initrd /initrd.img
}
EOF
}
prepare_all_snap() {
# we are still a "classic" image, prepare the surgery
if [ -e /var/lib/dpkg/status ]; then
setup_reflash_magic
REBOOT
fi
# verify after the first reboot that we are now in the all-snap world
if [ $SPREAD_REBOOT = 1 ]; then
echo "Ensure we are now in an all-snap world"
if [ -e /var/lib/dpkg/status ]; then
echo "Rebooting into all-snap system did not work"
exit 1
fi
fi
echo "Wait for firstboot change to be ready"
while ! snap changes | grep "Done"; do
snap changes || true
snap change 1 || true
sleep 1
done
echo "Ensure fundamental snaps are still present"
. $TESTSLIB/names.sh
for name in $gadget_name $kernel_name $core_name; do
if ! snap list | grep $name; then
echo "Not all fundamental snaps are available, all-snap image not valid"
echo "Currently installed snaps"
snap list
exit 1
fi
done
# ensure no auto-refresh happens during the tests
snap set core refresh.disabled=true
# Snapshot the fresh state (including boot/bootenv)
if [ ! -f $SPREAD_PATH/snapd-state.tar.gz ]; then
# we need to ensure that we also restore the boot environment
# fully for tests that break it
BOOT=""
if ls /boot/uboot/*; then
BOOT=/boot/uboot/
elif ls /boot/grub/*; then
BOOT=/boot/grub/
else
echo "Cannot determine bootdir in /boot:"
ls /boot
exit 1
fi
systemctl stop snapd.service snapd.socket
tar czf $SPREAD_PATH/snapd-state.tar.gz /var/lib/snapd $BOOT
systemctl start snapd.socket
fi
}
|
michihenning/snapd
|
tests/lib/prepare.sh
|
Shell
|
gpl-3.0
| 12,685 |
cp lib/JCuda-All-0.6.0-bin-linux-x86_64/* lib/
cp lib/JCuda-All-0.6.0-bin-apple-x86_64/* lib/
java -Dfile.encoding=UTF8 -Xmx1536M -Xss1M -XX:+CMSClassUnloadingEnabled -XX:MaxPermSize=256m -jar sbt-launch-*.jar "start-script"
|
tberg12/ocular
|
make_run_script.sh
|
Shell
|
gpl-3.0
| 227 |
#!/bin/sh
# Script called when pressing the ON/OFF button once
echo "Triggered shutdown" | ulogger -t "ShortPress" -p I
BLDC_Test_Bench -M 2 &
/bin/ardrone3_shutdown.sh
|
stiliajohny/Bebop-On-Off-Button
|
shortpress_1.sh
|
Shell
|
gpl-3.0
| 172 |
#!/bin/bash
mkdir build
cd build
cmake .. -DCMAKE_INSTALL_PREFIX=$PREFIX -DOPENSSL_ROOT_DIR=$PREFIX -DBUILD_SHARED_LIBS=ON -DBUILD_TESTING=OFF -DBUILD_EXAMPLES=OFF -DCMAKE_PREFIX_PATH=$PREFIX
make -j2
make install
|
fallen/artiq
|
conda/libssh2/build.sh
|
Shell
|
gpl-3.0
| 215 |
#!/bin/bash
PIDFILE="/home/radja/rsyncd.pid"
RSYNC_CONFIG="/home/radja/.snap-rsyncd.conf"
RSYNC_LOG="/home/radja/rsync.log"
LOG="/home/radja/create-snapshot.log"
USER="radja"
RUSER="${USER}"
LOCALPORT=9999
REMOTEPORT=8888
REMOTEHOST="external"
PID=""
CMD="hourly"
{
for i in monthly weekly daily hourly; do
[ -n "`echo $@ | grep $i`" ] && CMD=$i
done
echo Starting: `date`
[ -f ${PIDFILE} ] && echo "ERROR: ${PIDFILE} already exists" >&2 && exit 1
trap '[ -n "${PID}" ] && kill ${PID}' SIGHUP SIGINT SIGQUIT SIGTERM
rsync --daemon --config="${RSYNC_CONFIG}" --address=127.0.0.1 --port="${LOCALPORT}" --log-file="${RSYNC_LOG}" -v
sleep 3
[ -f ${PIDFILE} ] || { echo "ERROR: ${PIDFILE} doesn't exists" >&2 && exit 2; }
PID=`cat ${PIDFILE}`
sudo -u "${USER}" -H ssh -R localhost:${REMOTEPORT}:localhost:"${LOCALPORT}" "${RUSER}"@"${REMOTEHOST}" sudo snapshot-hourly.sh "$CMD"
##{ ps p ${PID} >& /dev/null && ps p $! >& /dev/null; } || echo "ERROR: Some of necessary processes does not exist" >&2 && cleanup_and_exit 2
##sudo -Hu radja ssh radja@"${REMOTEHOST}" sudo snapshot-hourly.sh
#assert $PID
[ -n "${PID}" ] && kill ${PID}
# TODO: send e-main messages
# TODO: clean it
# TODO: check all configuration files (and executable files) have correct permissions (root only write) if we launch process by root
# TODO: more consistent programms' names and conf- files' names
# TODO: configuration files for "server" and "client" scripts (port for communication etc)
# TODO: back backups (from server to laptop): database and web-applications
echo Ending: `date`
} 1>>${LOG} 2>&1
|
mutanabbi/rrb
|
create-snapshot.sh
|
Shell
|
gpl-3.0
| 1,672 |
#!/bin/bash
#
# GenesisPHP - Crear Común
#
# Copyright (C) 2016 Guillermo Valdes Lozano [email protected]
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.
#
# Yo soy
SOY="[Crear Común]"
# Constantes que definen los tipos de errores
EXITO=0
E_FATAL=99
# Validar que exista el directorio Eva
if [ ! -d ../Eva ]; then
echo "$SOY ERROR: No existe el directorio Eva."
echo " Debe ejecutar este script en el directorio del sistema."
echo " O mejor con Dios.sh que se encarga de ésto."
exit $E_FATAL
fi
# Validar que exista el directorio adan/lib
if [ ! -d adan/lib ]; then
echo "$SOY ERROR: No existe el directorio adan/lib. El script IniciarNuevoSistema.sh debería haberlo hecho."
exit $E_FATAL
fi
# Validar que exista el directorio adan/lib/Semillas
if [ ! -d adan/lib/Semillas ]; then
echo "$SOY ERROR: No existe el directorio adan/lib/Semillas. El script IniciarNuevoSistema.sh debería haberlo hecho."
exit $E_FATAL
fi
# Crear vínculos de adan/lib/*
cd adan/lib
for DIR in `ls ../../../Eva/adan/lib`
do
if [ ! -h $DIR ]; then
echo "$SOY Creando el vínculo adan/lib/$DIR..."
ln -s ../../../Eva/adan/lib/$DIR
if [ "$?" -ne $EXITO ]; then
echo "$SOY ERROR: No pude crear el vínculo para adan/lib/$DIR"
exit $E_FATAL
fi
fi
done
cd ../../
# Si existe htdocs será eliminado
if [ -d "htdocs" ]; then
echo "$SOY ELIMINANDO los directorios y archivos de htdocs..."
rm -rf htdocs
if [ "$?" -ne $EXITO ]; then
echo "$SOY ERROR: No pude eliminar htdocs"
exit $E_FATAL
fi
fi
# Crear el directorio htdocs
echo "$SOY Creando el directorio htdocs..."
mkdir htdocs
if [ "$?" -ne $EXITO ]; then
echo "$SOY ERROR: No pude crear el directorio htdocs"
exit $E_FATAL
fi
# Cambiarse al directorio htdocs
echo "$SOY Cambiándose a htdocs..."
cd htdocs
# Copiar archivos de la raiz
echo "$SOY Copiando los archivos PHP de la raiz..."
cp ../../Eva/htdocs/*.php .
if [ "$?" -ne $EXITO ]; then
echo "$SOY ERROR: No pude copiar los archivos de la raiz."
exit $E_FATAL
fi
# Copiar favicon
if [ -e ../../Eva/htdocs/favicon.ico ]; then
echo "$SOY Copiando favicon.ico..."
cp ../../Eva/htdocs/favicon.ico .
if [ "$?" -ne $EXITO ]; then
echo "$SOY ERROR: No pude copiar favicon.ico"
exit $E_FATAL
fi
fi
# Copiar directorios
for DIR in bin css fonts img imagenes js
do
echo "$SOY Copiando $DIR..."
cp -r ../../Eva/htdocs/$DIR .
if [ "$?" -ne $EXITO ]; then
echo "$SOY ERROR: No pude copiar $DIR"
exit $E_FATAL
fi
done
if [ -d imagenes/pruebas ]; then
rm -rf imagenes/pruebas
fi
# Crear el directorio htdocs/lib
echo "$SOY Creando el directorio htdocs/lib..."
mkdir lib
if [ "$?" -ne $EXITO ]; then
echo "$SOY ERROR: No pude crear el directorio htdocs/lib"
exit $E_FATAL
fi
# Cambiarse al directorio htdocs/lib
echo "$SOY Cambiándose a htdocs/lib..."
cd lib
if [ "$?" -ne $EXITO ]; then
echo "$SOY ERROR: No me pude cambiar a htdocs/lib"
exit $E_FATAL
fi
# Copiar directorios de htdocs/lib
for DIR in AdmAutentificaciones AdmBitacora AdmCadenero AdmDepartamentos AdmIntegrantes AdmModulos AdmRoles AdmSesiones AdmUsuarios Base2 Inicio Michelf Personalizar
do
echo "$SOY Copiando $DIR..."
cp -r ../../../Eva/htdocs/lib/$DIR .
if [ "$?" -ne $EXITO ]; then
echo "$SOY ERROR: No pude copiar $DIR"
exit $E_FATAL
fi
done
# Cambiarse al directorio htdocs/bin
echo "$SOY Cambiándose a htdocs/bin..."
cd ../bin
if [ "$?" -ne $EXITO ]; then
echo "$SOY ERROR: No me pude cambiar a htdocs/bin"
exit $E_FATAL
fi
# Crear vínculos en bin
echo "$SOY Creando vínculo de lib en bin..."
ln -s ../lib .
echo "$SOY Creando vínculo de imagenes en bin..."
ln -s ../imagenes .
echo "$SOY Script terminado."
exit $EXITO
|
guivaloz/GenesisPHP
|
Eva/adan/bin/CrearComun.sh
|
Shell
|
gpl-3.0
| 4,459 |
# Git utility functions
GIT_TRACKED=""
GIT_TRACKED_FILLED=0
git_is_tracked()
{
local file="$1"
# Fill list of tracked files only once
if [ $GIT_TRACKED_FILLED -eq 0 ]; then
GIT_TRACKED="$(git ls-files)"
GIT_TRACKED_FILLED=1
#echo "--------"
#echo "$GIT_TRACKED"
#echo "--------"
fi
# Remove leading './' from filename if any
file="$(echo $file | sed 's:^\.\/::')"
echo "$GIT_TRACKED" | grep -q "$file"
}
git_has_changes()
{
local file="$1"
! git diff-files --quiet "$file"
}
git_list_staged()
{
git diff --cached --name-only --diff-filter=d | \
tr '\n' ' '
}
|
elboulangero/Overcooked
|
scripts/code/lib-git.sh
|
Shell
|
gpl-3.0
| 622 |
#!/bin/sh
docker build -t nginx_dynamic .
|
alexellis/docker-arm
|
images/nginx_dynamic/build.sh
|
Shell
|
gpl-3.0
| 44 |
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