README.md

---
license: mit
task_categories:
- text-classification
tags:
  - biology
  - genomics
  - long-context
configs:
- config_name: drug_resistence_prediction
  data_files:
  - split: train
    path: "drug_resistence_prediction/train.parquet"
  - split: test
    path: "drug_resistence_prediction/test.parquet"
- config_name: fitness_prediction_Ammonium-chloride_N
  data_files:
  - split: train
    path: "fitness_prediction_Ammonium-chloride_N/train.parquet"
  - split: test
    path: "fitness_prediction_Ammonium-chloride_N/test.parquet"
- config_name: fitness_prediction_Cisplatin_stress
  data_files:
  - split: train
    path: "fitness_prediction_Cisplatin_stress/train.parquet"
  - split: test
    path: "fitness_prediction_Cisplatin_stress/test.parquet"
- config_name: fitness_prediction_D-Alanine_N
  data_files:
  - split: train
    path: "fitness_prediction_D-Alanine_N/train.parquet"
  - split: test
    path: "fitness_prediction_D-Alanine_N/test.parquet"
- config_name: fitness_prediction_L-Arabinose_C
  data_files:
  - split: train
    path: "fitness_prediction_L-Arabinose_C/train.parquet"
  - split: test
    path: "fitness_prediction_L-Arabinose_C/test.parquet"
- config_name: fitness_prediction_L-Histidine_nutrient
  data_files:
  - split: train
    path: "fitness_prediction_L-Histidine_nutrient/train.parquet"
  - split: test
    path: "fitness_prediction_L-Histidine_nutrient/test.parquet"
- config_name: fitness_prediction_LB-10C
  data_files:
  - split: train
    path: "fitness_prediction_LB-10C/train.parquet"
  - split: test
    path: "fitness_prediction_LB-10C/test.parquet"
- config_name: fitness_prediction_LB-20C
  data_files:
  - split: train
    path: "fitness_prediction_LB-20C/train.parquet"
  - split: test
    path: "fitness_prediction_LB-20C/test.parquet"
- config_name: fitness_prediction_LB-30C
  data_files:
  - split: train
    path: "fitness_prediction_LB-30C/train.parquet"
  - split: test
    path: "fitness_prediction_LB-30C/test.parquet"
- config_name: fitness_prediction_LB-pH6
  data_files:
  - split: train
    path: "fitness_prediction_LB-pH6/train.parquet"
  - split: test
    path: "fitness_prediction_LB-pH6/test.parquet"
- config_name: fitness_prediction_LB-pH8
  data_files:
  - split: train
    path: "fitness_prediction_LB-pH8/train.parquet"
  - split: test
    path: "fitness_prediction_LB-pH8/test.parquet"
- config_name: fitness_prediction_Min-media-glucose_nutrient
  data_files:
  - split: train
    path: "fitness_prediction_Min-media-glucose_nutrient/train.parquet"
  - split: test
    path: "fitness_prediction_Min-media-glucose_nutrient/test.parquet"
- config_name: fitness_prediction_Pyruvate_C
  data_files:
  - split: train
    path: "fitness_prediction_Pyruvate_C/train.parquet"
  - split: test
    path: "fitness_prediction_Pyruvate_C/test.parquet"
- config_name: fitness_prediction_perchlorate_stress
  data_files:
  - split: train
    path: "fitness_prediction_perchlorate_stress/train.parquet"
  - split: test
    path: "fitness_prediction_perchlorate_stress/test.parquet"
- config_name: gene_classification_bacteria
  data_files:
  - split: train
    path: "gene_classification_bacteria/train.parquet"
  - split: test
    path: "gene_classification_bacteria/test.parquet"
- config_name: taxonomic_classification_mixed_marker
  data_files:
  - split: train
    path: "taxonomic_classification_mixed_marker/train.parquet"
  - split: test
    path: "taxonomic_classification_mixed_marker/test.parquet"
- config_name: taxonomic_classification_random_fragment
  data_files:
  - split: train
    path: "taxonomic_classification_random_fragment/train.parquet"
  - split: test
    path: "taxonomic_classification_random_fragment/test.parquet"
- config_name: taxonomic_classification_ssu
  data_files:
  - split: train
    path: "taxonomic_classification_ssu/train.parquet"
  - split: test
    path: "taxonomic_classification_ssu/test.parquet"
---

## Abouts

In this repository, we present Prokaryotic Gener Tasks, a suite of biologically meaningful benchmark tasks in the prokaryotic domain.