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cd32d540___PRKACA_001__ENST00000308677___Flags
[Name] PRKACA-002 [Transcript ID] ENST00000590853 [bp] 1101 [Protein] 124aa [Translation ID] ENSP00000466976 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7ENJ5 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
cd32d540___PRKACA_001__ENST00000308677___Flags
[Name] PRKACA-006 [Transcript ID] ENST00000593092 [bp] 922 [Protein] 207aa [Translation ID] ENSP00000466289 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q15136 [RefSeq] - [Flags]
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
cd32d540___PRKACA_001__ENST00000308677___Flags
[Name] PRKACA-010 [Transcript ID] ENST00000587372 [bp] 824 [Protein] 251aa [Translation ID] ENSP00000468352 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7ERP6 [RefSeq] - [Flags]
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
cd32d540___PRKACA_001__ENST00000308677___Flags
[Name] PRKACA-008 [Transcript ID] ENST00000589284 [bp] 403 [Protein] 25aa [Translation ID] ENSP00000466660 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7EMV1 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
cd32d540___PRKACA_001__ENST00000308677___Flags
[Name] PRKACA-005 [Transcript ID] ENST00000350356 [bp] 3105 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
cd32d540___PRKACA_001__ENST00000308677___Flags
[Name] PRKACA-007 [Transcript ID] ENST00000587533 [bp] 2095 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:NA
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
cd32d540___PRKACA_001__ENST00000308677___Flags
[Name] PRKACA-004 [Transcript ID] ENST00000536649 [bp] 1524 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
cd32d540___PRKACA_001__ENST00000308677___Flags
[Name] PRKACA-009 [Transcript ID] ENST00000588209 [bp] 942 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-201 [Transcript ID] ENST00000419022 [bp] 6922 [Protein] 436aa [Translation ID] ENSP00000404100 [CCDS] CCDS31452 [UniProt] F1T0F8 P26367 [RefSeq] NM_001258462 NP_001245391 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL4 - APPRIS candidate principal isoform (longest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P4 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-202 [Transcript ID] ENST00000606377 [bp] 6860 [Protein] 436aa [Translation ID] ENSP00000480026 [CCDS] CCDS31452 [UniProt] F1T0F8 P26367 [RefSeq] NM_001258463 NP_001245392 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL4 - APPRIS candidate principal isoform (longest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P4 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-009 [Transcript ID] ENST00000379129 [bp] 2616 [Protein] 436aa [Translation ID] ENSP00000368424 [CCDS] CCDS31452 [UniProt] F1T0F8 P26367 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL4 - APPRIS candidate principal isoform (longest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P4 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-011 [Transcript ID] ENST00000379107 [bp] 2591 [Protein] 436aa [Translation ID] ENSP00000368401 [CCDS] CCDS31452 [UniProt] F1T0F8 P26367 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL4 - APPRIS candidate principal isoform (longest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P4 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-008 [Transcript ID] ENST00000379132 [bp] 2574 [Protein] 422aa [Translation ID] ENSP00000368427 [CCDS] CCDS31451 [UniProt] P26367 Q66SS1 [RefSeq] NM_001127612 NP_001121084 [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-003 [Transcript ID] ENST00000379123 [bp] 2160 [Protein] 422aa [Translation ID] ENSP00000368418 [CCDS] CCDS31451 [UniProt] P26367 Q66SS1 [RefSeq] NM_000280 NM_001258464 NP_000271 NP_001245393 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-001 [Transcript ID] ENST00000379115 [bp] 1763 [Protein] 436aa [Translation ID] ENSP00000368410 [CCDS] CCDS31452 [UniProt] F1T0F8 P26367 [RefSeq] NM_001604 NP_001595 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL4 - APPRIS candidate principal isoform (longest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P4 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-002 [Transcript ID] ENST00000241001 [bp] 1631 [Protein] 422aa [Translation ID] ENSP00000241001 [CCDS] CCDS31451 [UniProt] P26367 Q66SS1 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-005 [Transcript ID] ENST00000379111 [bp] 1627 [Protein] 422aa [Translation ID] ENSP00000368406 [CCDS] CCDS31451 [UniProt] P26367 Q66SS1 [RefSeq] NM_001258465 NP_001245394 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-004 [Transcript ID] ENST00000379109 [bp] 2157 [Protein] 422aa [Translation ID] ENSP00000368403 [CCDS] - [UniProt] P26367 Q66SS1 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-020 [Transcript ID] ENST00000525535 [bp] 677 [Protein] 2aa [Translation ID] ENSP00000436365 [CCDS] - [UniProt] - [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-021 [Transcript ID] ENST00000524853 [bp] 574 [Protein] 58aa [Translation ID] ENSP00000431585 [CCDS] - [UniProt] E9PKM0 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-012 [Transcript ID] ENST00000423822 [bp] 567 [Protein] 62aa [Translation ID] ENSP00000388132 [CCDS] - [UniProt] B1B1I9 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-016 [Transcript ID] ENST00000455099 [bp] 497 [Protein] 124aa [Translation ID] ENSP00000397384 [CCDS] - [UniProt] B1B1J0 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-013 [Transcript ID] ENST00000438681 [bp] 455 [Protein] 39aa [Translation ID] ENSP00000404356 [CCDS] - [UniProt] B1B1I8 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-029 [Transcript ID] ENST00000533156 [bp] 847 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-014 [Transcript ID] ENST00000471303 [bp] 782 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-027 [Transcript ID] ENST00000531910 [bp] 643 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-015 [Transcript ID] ENST00000481563 [bp] 613 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-028 [Transcript ID] ENST00000530373 [bp] 572 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-025 [Transcript ID] ENST00000530714 [bp] 567 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-024 [Transcript ID] ENST00000534353 [bp] 540 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-019 [Transcript ID] ENST00000533333 [bp] 6173 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-006 [Transcript ID] ENST00000470027 [bp] 2842 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-007 [Transcript ID] ENST00000494377 [bp] 2460 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-010 [Transcript ID] ENST00000464174 [bp] 979 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-017 [Transcript ID] ENST00000474783 [bp] 702 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-030 [Transcript ID] ENST00000532916 [bp] 627 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-026 [Transcript ID] ENST00000534390 [bp] 578 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-023 [Transcript ID] ENST00000532175 [bp] 524 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
f58d5595_pt__PAX6_016__ENST00000455099___Biotype
[Name] PAX6-022 [Transcript ID] ENST00000527769 [bp] 487 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PAX6-016 (ENST00000455099)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000007372;r=11:31794780-31806921;t=ENST00000455099
15/1438042989507.42_20150728002309-00004-ip-10-236-191-2_427579751_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-003 [Transcript ID] ENST00000367862 [bp] 14038 [Protein] 755aa [Translation ID] ENSP00000356836 [CCDS] CCDS55656 [UniProt] P14859 [RefSeq] NM_001198783 NP_001185712 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-002 [Transcript ID] ENST00000367866 [bp] 13905 [Protein] 766aa [Translation ID] ENSP00000356840 [CCDS] CCDS1259 [UniProt] P14859 [RefSeq] NM_002697 NP_002688 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-010 [Transcript ID] ENST00000429375 [bp] 13651 [Protein] 703aa [Translation ID] ENSP00000401217 [CCDS] CCDS55655 [UniProt] P14859 [RefSeq] NM_001198786 NP_001185715 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-017 [Transcript ID] ENST00000541643 [bp] 13937 [Protein] 743aa [Translation ID] ENSP00000441285 [CCDS] - [UniProt] A0A024R8Y2 P14859 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-005 [Transcript ID] ENST00000443275 [bp] 12939 [Protein] 561aa [Translation ID] ENSP00000415993 [CCDS] - [UniProt] A0A0C4DG88 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-014 [Transcript ID] ENST00000420254 [bp] 1896 [Protein] 594aa [Translation ID] ENSP00000414660 [CCDS] - [UniProt] A0A0A0MT46 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-001 [Transcript ID] ENST00000271411 [bp] 13945 [Protein] 57aa [Translation ID] ENSP00000271411 [CCDS] - [UniProt] Q16075 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-011 [Transcript ID] ENST00000560232 [bp] 1195 [Protein] 57aa [Translation ID] ENSP00000453094 [CCDS] - [UniProt] Q16075 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-007 [Transcript ID] ENST00000442313 [bp] 496 [Protein] 60aa [Translation ID] ENSP00000404571 [CCDS] - [UniProt] A0A0A0MSV5 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-004 [Transcript ID] ENST00000367865 [bp] 14332 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] NR_037163 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-008 [Transcript ID] ENST00000470928 [bp] 858 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-006 [Transcript ID] ENST00000492850 [bp] 615 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-016 [Transcript ID] ENST00000557909 [bp] 588 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-012 [Transcript ID] ENST00000559038 [bp] 557 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-015 [Transcript ID] ENST00000559648 [bp] 520 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
7b44d600___POU2F1_003__ENST00000367862___Biotype
[Name] POU2F1-009 [Transcript ID] ENST00000490100 [bp] 508 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: POU2F1-003 (ENST00000367862)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000143190;r=1:167329044-167427345;t=ENST00000367862
15/1438042987552.57_20150728002307-00276-ip-10-236-191-2_421945904_0.json
b9d50938___PRKACA_001__ENST00000308677___Biotype
[Name] PRKACA-001 [Transcript ID] ENST00000308677 [bp] 2677 [Protein] 351aa [Translation ID] ENSP00000309591 [CCDS] CCDS12304 [UniProt] A0A024R7J0 P17612 [RefSeq] NM_002730 NP_002721 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
b9d50938___PRKACA_001__ENST00000308677___Biotype
[Name] PRKACA-003 [Transcript ID] ENST00000589994 [bp] 1127 [Protein] 343aa [Translation ID] ENSP00000466651 [CCDS] CCDS12305 [UniProt] P17612 [RefSeq] NM_207518 NP_997401 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
b9d50938___PRKACA_001__ENST00000308677___Biotype
[Name] PRKACA-002 [Transcript ID] ENST00000590853 [bp] 1101 [Protein] 124aa [Translation ID] ENSP00000466976 [CCDS] - [UniProt] K7ENJ5 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
b9d50938___PRKACA_001__ENST00000308677___Biotype
[Name] PRKACA-006 [Transcript ID] ENST00000593092 [bp] 922 [Protein] 207aa [Translation ID] ENSP00000466289 [CCDS] - [UniProt] Q15136 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
b9d50938___PRKACA_001__ENST00000308677___Biotype
[Name] PRKACA-010 [Transcript ID] ENST00000587372 [bp] 824 [Protein] 251aa [Translation ID] ENSP00000468352 [CCDS] - [UniProt] K7ERP6 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
b9d50938___PRKACA_001__ENST00000308677___Biotype
[Name] PRKACA-008 [Transcript ID] ENST00000589284 [bp] 403 [Protein] 25aa [Translation ID] ENSP00000466660 [CCDS] - [UniProt] K7EMV1 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
b9d50938___PRKACA_001__ENST00000308677___Biotype
[Name] PRKACA-005 [Transcript ID] ENST00000350356 [bp] 3105 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
b9d50938___PRKACA_001__ENST00000308677___Biotype
[Name] PRKACA-007 [Transcript ID] ENST00000587533 [bp] 2095 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:NA [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
b9d50938___PRKACA_001__ENST00000308677___Biotype
[Name] PRKACA-004 [Transcript ID] ENST00000536649 [bp] 1524 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
b9d50938___PRKACA_001__ENST00000308677___Biotype
[Name] PRKACA-009 [Transcript ID] ENST00000588209 [bp] 942 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PRKACA-001 (ENST00000308677)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000072062;r=19:14213713-14228896;t=ENST00000308677
15/1438042987552.57_20150728002307-00008-ip-10-236-191-2_429986353_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-002 [Transcript ID] ENST00000356073 [bp] 8317 [Protein] 667aa [Translation ID] ENSP00000348374 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11960 [UniProt] A0A024R2C0 P15884 [RefSeq] NM_003199 NP_003190 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-049 [Transcript ID] ENST00000629387 [bp] 3789 [Protein] 671aa [Translation ID] ENSP00000486670 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS42438 [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-006 [Transcript ID] ENST00000564999 [bp] 3590 [Protein] 667aa [Translation ID] ENSP00000457649 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11960 [UniProt] A0A024R2C0 P15884 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-001 [Transcript ID] ENST00000354452 [bp] 3482 [Protein] 671aa [Translation ID] ENSP00000346440 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS42438 [UniProt] P15884 [RefSeq] NM_001083962 NP_001077431 [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-044 [Transcript ID] ENST00000570287 [bp] 3163 [Protein] 507aa [Translation ID] ENSP00000455763 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58625 [UniProt] P15884 [RefSeq] NM_001243235 NP_001230164 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-003 [Transcript ID] ENST00000537578 [bp] 2767 [Protein] 647aa [Translation ID] ENSP00000440731 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58629 [UniProt] P15884 [RefSeq] NM_001243227 NP_001230156 [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-019 [Transcript ID] ENST00000564403 [bp] 2696 [Protein] 677aa [Translation ID] ENSP00000457263 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58630 [UniProt] H3BTP3 [RefSeq] NM_001243228 NP_001230157 [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-007 [Transcript ID] ENST00000540999 [bp] 2572 [Protein] 643aa [Translation ID] ENSP00000445202 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS77192 [UniProt] P15884 [RefSeq] NM_001306207 NP_001293136 [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-004 [Transcript ID] ENST00000398339 [bp] 2551 [Protein] 773aa [Translation ID] ENSP00000381382 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58631 [UniProt] E9PH57 [RefSeq] NM_001243226 NP_001230155 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-009 [Transcript ID] ENST00000543082 [bp] 2399 [Protein] 625aa [Translation ID] ENSP00000439656 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58628 [UniProt] P15884 [RefSeq] NM_001243231 NP_001230160 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-008 [Transcript ID] ENST00000568673 [bp] 2398 [Protein] 647aa [Translation ID] ENSP00000455135 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58629 [UniProt] P15884 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-015 [Transcript ID] ENST00000457482 [bp] 2372 [Protein] 511aa [Translation ID] ENSP00000409447 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58624 [UniProt] P15884 [RefSeq] NM_001243234 NP_001230163 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-011 [Transcript ID] ENST00000544241 [bp] 2264 [Protein] 600aa [Translation ID] ENSP00000441562 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58627 [UniProt] P15884 [RefSeq] NM_001243232 NP_001230161 [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-010 [Transcript ID] ENST00000561992 [bp] 2184 [Protein] 537aa [Translation ID] ENSP00000455179 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58626 [UniProt] P15884 [RefSeq] NM_001243233 NP_001230162 [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-041 [Transcript ID] ENST00000566286 [bp] 2119 [Protein] 664aa [Translation ID] ENSP00000455418 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS59321 [UniProt] P15884 [RefSeq] NM_001243230 NP_001230159 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-013 [Transcript ID] ENST00000537856 [bp] 1996 [Protein] 537aa [Translation ID] ENSP00000439827 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58626 [UniProt] P15884 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-042 [Transcript ID] ENST00000564228 [bp] 1915 [Protein] 596aa [Translation ID] ENSP00000455261 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS77191 [UniProt] P15884 [RefSeq] NM_001306208 NP_001293137 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-012 [Transcript ID] ENST00000570177 [bp] 1872 [Protein] 537aa [Translation ID] ENSP00000454647 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58626 [UniProt] P15884 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-016 [Transcript ID] ENST00000561831 [bp] 1823 [Protein] 507aa [Translation ID] ENSP00000457765 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58623 [UniProt] P15884 [RefSeq] NM_001243236 NP_001230165 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-201 [Transcript ID] ENST00000616053 [bp] 8140 [Protein] 583aa [Translation ID] ENSP00000478549 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] P15884 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-005 [Transcript ID] ENST00000568740 [bp] 2628 [Protein] 642aa [Translation ID] ENSP00000455346 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BPJ7 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-074 [Transcript ID] ENST00000565018 [bp] 2357 [Protein] 583aa [Translation ID] ENSP00000455984 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] P15884 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-045 [Transcript ID] ENST00000566279 [bp] 2128 [Protein] 611aa [Translation ID] ENSP00000456125 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] P15884 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-046 [Transcript ID] ENST00000567880 [bp] 1948 [Protein] 607aa [Translation ID] ENSP00000454366 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] P15884 [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-060 [Transcript ID] ENST00000626584 [bp] 1701 [Protein] 451aa [Translation ID] ENSP00000486072 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-033 [Transcript ID] ENST00000628078 [bp] 1277 [Protein] 207aa [Translation ID] ENSP00000486909 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-014 [Transcript ID] ENST00000562030 [bp] 1084 [Protein] 179aa [Translation ID] ENSP00000456220 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BRF7 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-070 [Transcript ID] ENST00000630720 [bp] 1018 [Protein] 315aa [Translation ID] ENSP00000487218 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-027 [Transcript ID] ENST00000566514 [bp] 969 [Protein] 287aa [Translation ID] ENSP00000456983 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BT24 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-028 [Transcript ID] ENST00000563824 [bp] 897 [Protein] 159aa [Translation ID] ENSP00000457113 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BTC3 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-025 [Transcript ID] ENST00000627685 [bp] 882 [Protein] 204aa [Translation ID] ENSP00000487171 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-021 [Transcript ID] ENST00000568169 [bp] 870 [Protein] 280aa [Translation ID] ENSP00000457392 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BTZ0 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-051 [Transcript ID] ENST00000626595 [bp] 833 [Protein] 221aa [Translation ID] ENSP00000487415 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-059 [Transcript ID] ENST00000630712 [bp] 831 [Protein] 129aa [Translation ID] ENSP00000487419 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json
491b3bdf_pt__TCF4_042__ENST00000564228___Flags
[Name] TCF4-061 [Transcript ID] ENST00000628636 [bp] 826 [Protein] 225aa [Translation ID] ENSP00000485755 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TCF4-042 (ENST00000564228)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000196628;r=18:55227911-55403714;t=ENST00000564228
15/1438042989507.42_20150728002309-00135-ip-10-236-191-2_428216375_0.json