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f07d1e9d_t__PDPK1_011__ENST00000471311___Biotype
[Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
f07d1e9d_t__PDPK1_011__ENST00000471311___Biotype
[Name] PDPK1-006 [Transcript ID] ENST00000474706 [bp] 699 [Protein] 35aa [Translation ID] ENSP00000455025 [CCDS] - [UniProt] H3BNV5 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
f07d1e9d_t__PDPK1_011__ENST00000471311___Biotype
[Name] PDPK1-007 [Transcript ID] ENST00000492021 [bp] 552 [Protein] 55aa [Translation ID] ENSP00000455684 [CCDS] - [UniProt] H3BQA3 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
f07d1e9d_t__PDPK1_011__ENST00000471311___Biotype
[Name] PDPK1-012 [Transcript ID] ENST00000478708 [bp] 445 [Protein] 40aa [Translation ID] ENSP00000455438 [CCDS] - [UniProt] H3BPR5 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
f07d1e9d_t__PDPK1_011__ENST00000471311___Biotype
[Name] PDPK1-011 [Transcript ID] ENST00000471311 [bp] 621 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
f07d1e9d_t__PDPK1_011__ENST00000471311___Biotype
[Name] PDPK1-017 [Transcript ID] ENST00000561962 [bp] 570 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
f07d1e9d_t__PDPK1_011__ENST00000471311___Biotype
[Name] PDPK1-009 [Transcript ID] ENST00000460496 [bp] 569 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
f07d1e9d_t__PDPK1_011__ENST00000471311___Biotype
[Name] PDPK1-016 [Transcript ID] ENST00000462923 [bp] 550 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
f07d1e9d_t__PDPK1_011__ENST00000471311___Biotype
[Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
f07d1e9d_t__PDPK1_011__ENST00000471311___Biotype
[Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
f07d1e9d_t__PDPK1_011__ENST00000471311___Biotype
[Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
f07d1e9d_t__PDPK1_011__ENST00000471311___Biotype
[Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-001 [Transcript ID] ENST00000342085 [bp] 7241 [Protein] 556aa [Translation ID] ENSP00000344220 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10472 [UniProt] O15530 [RefSeq] NM_002613 NP_002604 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-002 [Transcript ID] ENST00000268673 [bp] 4728 [Protein] 429aa [Translation ID] ENSP00000268673 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10473 [UniProt] O15530 [RefSeq] NM_031268 NP_112558 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-013 [Transcript ID] ENST00000441549 [bp] 1729 [Protein] 454aa [Translation ID] ENSP00000395357 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58411 [UniProt] O15530 [RefSeq] NM_001261816 NP_001248745 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-003 [Transcript ID] ENST00000389224 [bp] 2416 [Protein] 529aa [Translation ID] ENSP00000373876 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E9PER6 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-008 [Transcript ID] ENST00000461815 [bp] 611 [Protein] 149aa [Translation ID] ENSP00000455551 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BQ10 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-006 [Transcript ID] ENST00000474706 [bp] 699 [Protein] 35aa [Translation ID] ENSP00000455025 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BNV5 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-007 [Transcript ID] ENST00000492021 [bp] 552 [Protein] 55aa [Translation ID] ENSP00000455684 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BQA3 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-012 [Transcript ID] ENST00000478708 [bp] 445 [Protein] 40aa [Translation ID] ENSP00000455438 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BPR5 [RefSeq] - [Flags]
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-011 [Transcript ID] ENST00000471311 [bp] 621 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-017 [Transcript ID] ENST00000561962 [bp] 570 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-009 [Transcript ID] ENST00000460496 [bp] 569 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-016 [Transcript ID] ENST00000462923 [bp] 550 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
ce9a9c1f_t__PDPK1_011__ENST00000471311___Flags
[Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PDPK1-011 (ENST00000471311)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000140992;r=16:2615554-2621342;t=ENST00000471311
45/1438042981525.10_20150728002301-00304-ip-10-236-191-2_411628615_0.json
1eb651aa_t__RAD51_007__ENST00000527860___Flags
[Name] RAD51-001 [Transcript ID] ENST00000267868 [bp] 2449 [Protein] 339aa [Translation ID] ENSP00000267868 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10062 [UniProt] Q06609 [RefSeq] NM_002875 NP_002866 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
[]
Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: RAD51-007 (ENST00000527860)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Table?db=core;g=ENSG00000051180;r=15:40986972-41011084;t=ENST00000527860
45/1438042989897.84_20150728002309-00268-ip-10-236-191-2_422636691_0.json
1eb651aa_t__RAD51_007__ENST00000527860___Flags
[Name] RAD51-002 [Transcript ID] ENST00000423169 [bp] 1611 [Protein] 280aa [Translation ID] ENSP00000406602 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS53932 [UniProt] Q06609 [RefSeq] NM_001164270 NP_001157742 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: RAD51-007 (ENST00000527860)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Table?db=core;g=ENSG00000051180;r=15:40986972-41011084;t=ENST00000527860
45/1438042989897.84_20150728002309-00268-ip-10-236-191-2_422636691_0.json
1eb651aa_t__RAD51_007__ENST00000527860___Flags
[Name] RAD51-009 [Transcript ID] ENST00000382643 [bp] 1588 [Protein] 340aa [Translation ID] ENSP00000372088 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS53931 [UniProt] Q06609 [RefSeq] NM_001164269 NP_001157741 [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: RAD51-007 (ENST00000527860)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Table?db=core;g=ENSG00000051180;r=15:40986972-41011084;t=ENST00000527860
45/1438042989897.84_20150728002309-00268-ip-10-236-191-2_422636691_0.json
1eb651aa_t__RAD51_007__ENST00000527860___Flags
[Name] RAD51-008 [Transcript ID] ENST00000532743 [bp] 1515 [Protein] 340aa [Translation ID] ENSP00000433924 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS53931 [UniProt] Q06609 [RefSeq] NM_133487 NP_597994 [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: RAD51-007 (ENST00000527860)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Table?db=core;g=ENSG00000051180;r=15:40986972-41011084;t=ENST00000527860
45/1438042989897.84_20150728002309-00268-ip-10-236-191-2_422636691_0.json
1eb651aa_t__RAD51_007__ENST00000527860___Flags
[Name] RAD51-003 [Transcript ID] ENST00000557850 [bp] 1397 [Protein] 242aa [Translation ID] ENSP00000454176 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q06609 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: RAD51-007 (ENST00000527860)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Table?db=core;g=ENSG00000051180;r=15:40986972-41011084;t=ENST00000527860
45/1438042989897.84_20150728002309-00268-ip-10-236-191-2_422636691_0.json
1eb651aa_t__RAD51_007__ENST00000527860___Flags
[Name] RAD51-006 [Transcript ID] ENST00000526763 [bp] 625 [Protein] 75aa [Translation ID] ENSP00000431897 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q9NZG9 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: RAD51-007 (ENST00000527860)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Table?db=core;g=ENSG00000051180;r=15:40986972-41011084;t=ENST00000527860
45/1438042989897.84_20150728002309-00268-ip-10-236-191-2_422636691_0.json
1eb651aa_t__RAD51_007__ENST00000527860___Flags
[Name] RAD51-007 [Transcript ID] ENST00000527860 [bp] 566 [Protein] 172aa [Translation ID] ENSP00000432759 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E9PNT5 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
[]
Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: RAD51-007 (ENST00000527860)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Table?db=core;g=ENSG00000051180;r=15:40986972-41011084;t=ENST00000527860
45/1438042989897.84_20150728002309-00268-ip-10-236-191-2_422636691_0.json
1eb651aa_t__RAD51_007__ENST00000527860___Flags
[Name] RAD51-004 [Transcript ID] ENST00000525066 [bp] 1545 [Protein] 151aa [Translation ID] ENSP00000431864 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] E9PJ30 [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: RAD51-007 (ENST00000527860)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Table?db=core;g=ENSG00000051180;r=15:40986972-41011084;t=ENST00000527860
45/1438042989897.84_20150728002309-00268-ip-10-236-191-2_422636691_0.json
1eb651aa_t__RAD51_007__ENST00000527860___Flags
[Name] RAD51-010 [Transcript ID] ENST00000531277 [bp] 658 [Protein] 100aa [Translation ID] ENSP00000436512 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] E9PI54 [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: RAD51-007 (ENST00000527860)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Table?db=core;g=ENSG00000051180;r=15:40986972-41011084;t=ENST00000527860
45/1438042989897.84_20150728002309-00268-ip-10-236-191-2_422636691_0.json
1eb651aa_t__RAD51_007__ENST00000527860___Flags
[Name] RAD51-013 [Transcript ID] ENST00000533741 [bp] 425 [Protein] 65aa [Translation ID] ENSP00000433053 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H0YD61 [RefSeq] - [Flags]
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
[]
Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: RAD51-007 (ENST00000527860)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Table?db=core;g=ENSG00000051180;r=15:40986972-41011084;t=ENST00000527860
45/1438042989897.84_20150728002309-00268-ip-10-236-191-2_422636691_0.json
e010ac24_t__EIF3K_006__ENST00000593062___Biotype
[Name] EIF3K-001 [Transcript ID] ENST00000248342 [bp] 864 [Protein] 218aa [Translation ID] ENSP00000248342 [CCDS] CCDS12517 [UniProt] Q9UBQ5 [RefSeq] NM_013234 NP_037366 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL2 - APPRIS candidate principal isoform (CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
e010ac24_t__EIF3K_006__ENST00000593062___Biotype
[Name] EIF3K-004 [Transcript ID] ENST00000593149 [bp] 760 [Protein] 131aa [Translation ID] ENSP00000465460 [CCDS] CCDS77293 [UniProt] K7EK53 [RefSeq] NM_001308393 NP_001295322 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
e010ac24_t__EIF3K_006__ENST00000593062___Biotype
[Name] EIF3K-012 [Transcript ID] ENST00000592558 [bp] 670 [Protein] 192aa [Translation ID] ENSP00000468231 [CCDS] CCDS74360 [UniProt] K7ERF1 [RefSeq] NM_001300992 NP_001287921 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
e010ac24_t__EIF3K_006__ENST00000593062___Biotype
[Name] EIF3K-003 [Transcript ID] ENST00000545173 [bp] 1327 [Protein] 211aa [Translation ID] ENSP00000438145 [CCDS] - [UniProt] Q9UBQ5 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
e010ac24_t__EIF3K_006__ENST00000593062___Biotype
[Name] EIF3K-002 [Transcript ID] ENST00000538434 [bp] 966 [Protein] 124aa [Translation ID] ENSP00000440999 [CCDS] - [UniProt] B4DQ48 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
e010ac24_t__EIF3K_006__ENST00000593062___Biotype
[Name] EIF3K-201 [Transcript ID] ENST00000614624 [bp] 780 [Protein] 185aa [Translation ID] ENSP00000479334 [CCDS] - [UniProt] A0A087WVB9 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
e010ac24_t__EIF3K_006__ENST00000593062___Biotype
[Name] EIF3K-009 [Transcript ID] ENST00000591409 [bp] 583 [Protein] 170aa [Translation ID] ENSP00000467895 [CCDS] - [UniProt] K7EQM4 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
e010ac24_t__EIF3K_006__ENST00000593062___Biotype
[Name] EIF3K-007 [Transcript ID] ENST00000588934 [bp] 501 [Protein] 137aa [Translation ID] ENSP00000468525 [CCDS] - [UniProt] K7ES31 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
e010ac24_t__EIF3K_006__ENST00000593062___Biotype
[Name] EIF3K-006 [Transcript ID] ENST00000593062 [bp] 704 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
e010ac24_t__EIF3K_006__ENST00000593062___Biotype
[Name] EIF3K-015 [Transcript ID] ENST00000586513 [bp] 493 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
e010ac24_t__EIF3K_006__ENST00000593062___Biotype
[Name] EIF3K-014 [Transcript ID] ENST00000590134 [bp] 711 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
e010ac24_t__EIF3K_006__ENST00000593062___Biotype
[Name] EIF3K-005 [Transcript ID] ENST00000586932 [bp] 667 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
e010ac24_t__EIF3K_006__ENST00000593062___Biotype
[Name] EIF3K-013 [Transcript ID] ENST00000588299 [bp] 524 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
e010ac24_t__EIF3K_006__ENST00000593062___Biotype
[Name] EIF3K-010 [Transcript ID] ENST00000588422 [bp] 507 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-001 [Transcript ID] ENST00000268097 [bp] 5252 [Protein] 529aa [Translation ID] ENSP00000268097 [CCDS] CCDS10243 [UniProt] P06865 [RefSeq] NM_000520 NP_000511 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL2 - APPRIS candidate principal isoform (CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-012 [Transcript ID] ENST00000566304 [bp] 1795 [Protein] 540aa [Translation ID] ENSP00000455114 [CCDS] - [UniProt] H3BP20 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-016 [Transcript ID] ENST00000567159 [bp] 1582 [Protein] 509aa [Translation ID] ENSP00000456489 [CCDS] - [UniProt] H3BS10 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-007 [Transcript ID] ENST00000567213 [bp] 1000 [Protein] 119aa [Translation ID] ENSP00000478217 [CCDS] - [UniProt] A0A087WTY2 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-003 [Transcript ID] ENST00000567411 [bp] 1743 [Protein] 143aa [Translation ID] ENSP00000455545 [CCDS] - [UniProt] H3BQ04 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-004 [Transcript ID] ENST00000566672 [bp] 1397 [Protein] 143aa [Translation ID] ENSP00000457037 [CCDS] - [UniProt] H3BT62 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-005 [Transcript ID] ENST00000567027 [bp] 1353 [Protein] 318aa [Translation ID] ENSP00000457521 [CCDS] - [UniProt] H3BU85 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-011 [Transcript ID] ENST00000569410 [bp] 1351 [Protein] 373aa [Translation ID] ENSP00000457125 [CCDS] - [UniProt] H3BTD4 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-002 [Transcript ID] ENST00000563762 [bp] 1174 [Protein] 88aa [Translation ID] ENSP00000456346 [CCDS] - [UniProt] H3BRP6 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-014 [Transcript ID] ENST00000568260 [bp] 674 [Protein] 128aa [Translation ID] ENSP00000458128 [CCDS] - [UniProt] H3BVH8 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-006 [Transcript ID] ENST00000569509 [bp] 590 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-015 [Transcript ID] ENST00000568777 [bp] 6909 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-009 [Transcript ID] ENST00000565873 [bp] 721 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-008 [Transcript ID] ENST00000564677 [bp] 572 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-013 [Transcript ID] ENST00000563908 [bp] 524 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
12dc2202_pt__HEXA_016__ENST00000567159___Biotype
[Name] HEXA-010 [Transcript ID] ENST00000569116 [bp] 449 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: HEXA-016 (ENST00000567159)
Biotype
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000213614;r=15:72345411-72375993;t=ENST00000567159
45/1438042989897.84_20150728002309-00113-ip-10-236-191-2_427811388_0.json
36f51ace_t__EIF3K_006__ENST00000593062___Flags
[Name] EIF3K-001 [Transcript ID] ENST00000248342 [bp] 864 [Protein] 218aa [Translation ID] ENSP00000248342 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS12517 [UniProt] Q9UBQ5 [RefSeq] NM_013234 NP_037366 [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL2 - APPRIS candidate principal isoform (CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
36f51ace_t__EIF3K_006__ENST00000593062___Flags
[Name] EIF3K-004 [Transcript ID] ENST00000593149 [bp] 760 [Protein] 131aa [Translation ID] ENSP00000465460 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS77293 [UniProt] K7EK53 [RefSeq] NM_001308393 NP_001295322 [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
36f51ace_t__EIF3K_006__ENST00000593062___Flags
[Name] EIF3K-012 [Transcript ID] ENST00000592558 [bp] 670 [Protein] 192aa [Translation ID] ENSP00000468231 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS74360 [UniProt] K7ERF1 [RefSeq] NM_001300992 NP_001287921 [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
36f51ace_t__EIF3K_006__ENST00000593062___Flags
[Name] EIF3K-003 [Transcript ID] ENST00000545173 [bp] 1327 [Protein] 211aa [Translation ID] ENSP00000438145 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q9UBQ5 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
36f51ace_t__EIF3K_006__ENST00000593062___Flags
[Name] EIF3K-002 [Transcript ID] ENST00000538434 [bp] 966 [Protein] 124aa [Translation ID] ENSP00000440999 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] B4DQ48 [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
36f51ace_t__EIF3K_006__ENST00000593062___Flags
[Name] EIF3K-201 [Transcript ID] ENST00000614624 [bp] 780 [Protein] 185aa [Translation ID] ENSP00000479334 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WVB9 [RefSeq] - [Flags]
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
36f51ace_t__EIF3K_006__ENST00000593062___Flags
[Name] EIF3K-009 [Transcript ID] ENST00000591409 [bp] 583 [Protein] 170aa [Translation ID] ENSP00000467895 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7EQM4 [RefSeq] - [Flags]
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
36f51ace_t__EIF3K_006__ENST00000593062___Flags
[Name] EIF3K-007 [Transcript ID] ENST00000588934 [bp] 501 [Protein] 137aa [Translation ID] ENSP00000468525 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7ES31 [RefSeq] - [Flags]
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
36f51ace_t__EIF3K_006__ENST00000593062___Flags
[Name] EIF3K-006 [Transcript ID] ENST00000593062 [bp] 704 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
36f51ace_t__EIF3K_006__ENST00000593062___Flags
[Name] EIF3K-015 [Transcript ID] ENST00000586513 [bp] 493 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
36f51ace_t__EIF3K_006__ENST00000593062___Flags
[Name] EIF3K-014 [Transcript ID] ENST00000590134 [bp] 711 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
36f51ace_t__EIF3K_006__ENST00000593062___Flags
[Name] EIF3K-005 [Transcript ID] ENST00000586932 [bp] 667 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
36f51ace_t__EIF3K_006__ENST00000593062___Flags
[Name] EIF3K-013 [Transcript ID] ENST00000588299 [bp] 524 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
36f51ace_t__EIF3K_006__ENST00000593062___Flags
[Name] EIF3K-010 [Transcript ID] ENST00000588422 [bp] 507 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
[]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EIF3K-006 (ENST00000593062)
Flags
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000178982;r=19:38619186-38630968;t=ENST00000593062
45/1438042989897.84_20150728002309-00184-ip-10-236-191-2_438791069_0.json
e256f2c8_ne__SERPING1__ENSG00000149131___Biotype
[Name] SERPING1-001 [Transcript ID] ENST00000278407 [bp] 2002 [Protein] 500aa [Translation ID] ENSP00000278407 [CCDS] CCDS7962 [UniProt] E9KL26 P05155 [RefSeq] NM_000062 NM_001032295 NP_000053 NP_001027466 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL2 - APPRIS candidate principal isoform (CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SERPING1 (ENSG00000149131)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000149131;r=11:57597387-57614853
45/1438042989331.34_20150728002309-00056-ip-10-236-191-2_421571118_0.json
e256f2c8_ne__SERPING1__ENSG00000149131___Biotype
[Name] SERPING1-002 [Transcript ID] ENST00000403558 [bp] 2231 [Protein] 543aa [Translation ID] ENSP00000384420 [CCDS] - [UniProt] E9PGN7 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SERPING1 (ENSG00000149131)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000149131;r=11:57597387-57614853
45/1438042989331.34_20150728002309-00056-ip-10-236-191-2_421571118_0.json
e256f2c8_ne__SERPING1__ENSG00000149131___Biotype
[Name] SERPING1-007 [Transcript ID] ENST00000378324 [bp] 1751 [Protein] 448aa [Translation ID] ENSP00000367575 [CCDS] - [UniProt] P05155 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SERPING1 (ENSG00000149131)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000149131;r=11:57597387-57614853
45/1438042989331.34_20150728002309-00056-ip-10-236-191-2_421571118_0.json
e256f2c8_ne__SERPING1__ENSG00000149131___Biotype
[Name] SERPING1-005 [Transcript ID] ENST00000378323 [bp] 1733 [Protein] 505aa [Translation ID] ENSP00000367574 [CCDS] - [UniProt] P05155 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SERPING1 (ENSG00000149131)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000149131;r=11:57597387-57614853
45/1438042989331.34_20150728002309-00056-ip-10-236-191-2_421571118_0.json
e256f2c8_ne__SERPING1__ENSG00000149131___Biotype
[Name] SERPING1-006 [Transcript ID] ENST00000340687 [bp] 1719 [Protein] 463aa [Translation ID] ENSP00000341861 [CCDS] - [UniProt] H9KV48 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SERPING1 (ENSG00000149131)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000149131;r=11:57597387-57614853
45/1438042989331.34_20150728002309-00056-ip-10-236-191-2_421571118_0.json
e256f2c8_ne__SERPING1__ENSG00000149131___Biotype
[Name] SERPING1-004 [Transcript ID] ENST00000405496 [bp] 648 [Protein] 160aa [Translation ID] ENSP00000384561 [CCDS] - [UniProt] B5MCB9 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SERPING1 (ENSG00000149131)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000149131;r=11:57597387-57614853
45/1438042989331.34_20150728002309-00056-ip-10-236-191-2_421571118_0.json
e256f2c8_ne__SERPING1__ENSG00000149131___Biotype
[Name] SERPING1-201 [Transcript ID] ENST00000619430 [bp] 634 [Protein] 133aa [Translation ID] ENSP00000478572 [CCDS] - [UniProt] A0A087WUD9 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SERPING1 (ENSG00000149131)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000149131;r=11:57597387-57614853
45/1438042989331.34_20150728002309-00056-ip-10-236-191-2_421571118_0.json
e256f2c8_ne__SERPING1__ENSG00000149131___Biotype
[Name] SERPING1-003 [Transcript ID] ENST00000457869 [bp] 569 [Protein] 122aa [Translation ID] ENSP00000399746 [CCDS] - [UniProt] C9JZJ9 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SERPING1 (ENSG00000149131)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000149131;r=11:57597387-57614853
45/1438042989331.34_20150728002309-00056-ip-10-236-191-2_421571118_0.json
e256f2c8_ne__SERPING1__ENSG00000149131___Biotype
[Name] SERPING1-008 [Transcript ID] ENST00000531133 [bp] 1004 [Protein] 43aa [Translation ID] ENSP00000435431 [CCDS] - [UniProt] E9PK97 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SERPING1 (ENSG00000149131)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000149131;r=11:57597387-57614853
45/1438042989331.34_20150728002309-00056-ip-10-236-191-2_421571118_0.json
e256f2c8_ne__SERPING1__ENSG00000149131___Biotype
[Name] SERPING1-011 [Transcript ID] ENST00000528996 [bp] 956 [Protein] 86aa [Translation ID] ENSP00000431226 [CCDS] - [UniProt] H0YCA1 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SERPING1 (ENSG00000149131)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000149131;r=11:57597387-57614853
45/1438042989331.34_20150728002309-00056-ip-10-236-191-2_421571118_0.json
e256f2c8_ne__SERPING1__ENSG00000149131___Biotype
[Name] SERPING1-009 [Transcript ID] ENST00000531797 [bp] 907 [Protein] 43aa [Translation ID] ENSP00000432554 [CCDS] - [UniProt] E9PK97 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SERPING1 (ENSG00000149131)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000149131;r=11:57597387-57614853
45/1438042989331.34_20150728002309-00056-ip-10-236-191-2_421571118_0.json
e256f2c8_ne__SERPING1__ENSG00000149131___Biotype
[Name] SERPING1-010 [Transcript ID] ENST00000531605 [bp] 579 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SERPING1 (ENSG00000149131)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000149131;r=11:57597387-57614853
45/1438042989331.34_20150728002309-00056-ip-10-236-191-2_421571118_0.json
e256f2c8_ne__SERPING1__ENSG00000149131___Biotype
[Name] SERPING1-012 [Transcript ID] ENST00000530113 [bp] 908 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
[]
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SERPING1 (ENSG00000149131)
Biotype
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000149131;r=11:57597387-57614853
45/1438042989331.34_20150728002309-00056-ip-10-236-191-2_421571118_0.json
d813eee8___ZBTB7B_201__ENST00000417934___RefSeq
[Name] ZBTB7B-201 [Transcript ID] ENST00000417934 [bp] 4017 [Protein] 573aa [Translation ID] ENSP00000406286 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58030 [UniProt] O15156 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [RefSeq]
NM_001252406 NP_001239335
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Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ZBTB7B-201 (ENST00000417934)
RefSeq
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000160685;r=1:155002630-155018522;t=ENST00000417934
45/1438042989897.84_20150728002309-00013-ip-10-236-191-2_419637453_0.json
d813eee8___ZBTB7B_201__ENST00000417934___RefSeq
[Name] ZBTB7B-202 [Transcript ID] ENST00000535420 [bp] 3777 [Protein] 539aa [Translation ID] ENSP00000438647 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS1081 [UniProt] O15156 [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [RefSeq]
NM_001256455 NP_001243384
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Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ZBTB7B-201 (ENST00000417934)
RefSeq
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000160685;r=1:155002630-155018522;t=ENST00000417934
45/1438042989897.84_20150728002309-00013-ip-10-236-191-2_419637453_0.json
d813eee8___ZBTB7B_201__ENST00000417934___RefSeq
[Name] ZBTB7B-001 [Transcript ID] ENST00000368426 [bp] 3594 [Protein] 539aa [Translation ID] ENSP00000357411 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS1081 [UniProt] O15156 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [RefSeq]
-
[ [ "N", "M", "_", "0", "0", "1", "2", "5", "2", "4", "0", "6", " ", "N", "P", "_", "0", "0", "1", "2", "3", "9", "3", "3", "5" ], [ "N", "M", "_", "0", "0", "1", "2", "5", "6", "4", "5", "5", " ", "N", "P", "_", "0", "0", "1", "2", "4", "3", "3", "8", "4" ], [ "-" ] ]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ZBTB7B-201 (ENST00000417934)
RefSeq
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000160685;r=1:155002630-155018522;t=ENST00000417934
45/1438042989897.84_20150728002309-00013-ip-10-236-191-2_419637453_0.json
d813eee8___ZBTB7B_201__ENST00000417934___RefSeq
[Name] ZBTB7B-002 [Transcript ID] ENST00000292176 [bp] 2129 [Protein] 539aa [Translation ID] ENSP00000292176 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS1081 [UniProt] O15156 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [RefSeq]
-
[ [ "N", "M", "_", "0", "0", "1", "2", "5", "2", "4", "0", "6", " ", "N", "P", "_", "0", "0", "1", "2", "3", "9", "3", "3", "5" ], [ "N", "M", "_", "0", "0", "1", "2", "5", "6", "4", "5", "5", " ", "N", "P", "_", "0", "0", "1", "2", "4", "3", "3", "8", "4" ], [ "-" ] ]
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ZBTB7B-201 (ENST00000417934)
RefSeq
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000160685;r=1:155002630-155018522;t=ENST00000417934
45/1438042989897.84_20150728002309-00013-ip-10-236-191-2_419637453_0.json