peacock-data-public-datasets-idc-cronscript
/
venv
/lib
/python3.10
/site-packages
/scipy
/_lib
/deprecation.py
from inspect import Parameter, signature | |
import functools | |
import warnings | |
from importlib import import_module | |
__all__ = ["_deprecated"] | |
# Object to use as default value for arguments to be deprecated. This should | |
# be used over 'None' as the user could parse 'None' as a positional argument | |
_NoValue = object() | |
def _sub_module_deprecation(*, sub_package, module, private_modules, all, | |
attribute, correct_module=None): | |
"""Helper function for deprecating modules that are public but were | |
intended to be private. | |
Parameters | |
---------- | |
sub_package : str | |
Subpackage the module belongs to eg. stats | |
module : str | |
Public but intended private module to deprecate | |
private_modules : list | |
Private replacement(s) for `module`; should contain the | |
content of ``all``, possibly spread over several modules. | |
all : list | |
``__all__`` belonging to `module` | |
attribute : str | |
The attribute in `module` being accessed | |
correct_module : str, optional | |
Module in `sub_package` that `attribute` should be imported from. | |
Default is that `attribute` should be imported from ``scipy.sub_package``. | |
""" | |
if correct_module is not None: | |
correct_import = f"scipy.{sub_package}.{correct_module}" | |
else: | |
correct_import = f"scipy.{sub_package}" | |
if attribute not in all: | |
raise AttributeError( | |
f"`scipy.{sub_package}.{module}` has no attribute `{attribute}`; " | |
f"furthermore, `scipy.{sub_package}.{module}` is deprecated " | |
f"and will be removed in SciPy 2.0.0." | |
) | |
attr = getattr(import_module(correct_import), attribute, None) | |
if attr is not None: | |
message = ( | |
f"Please import `{attribute}` from the `{correct_import}` namespace; " | |
f"the `scipy.{sub_package}.{module}` namespace is deprecated " | |
f"and will be removed in SciPy 2.0.0." | |
) | |
else: | |
message = ( | |
f"`scipy.{sub_package}.{module}.{attribute}` is deprecated along with " | |
f"the `scipy.{sub_package}.{module}` namespace. " | |
f"`scipy.{sub_package}.{module}.{attribute}` will be removed " | |
f"in SciPy 1.14.0, and the `scipy.{sub_package}.{module}` namespace " | |
f"will be removed in SciPy 2.0.0." | |
) | |
warnings.warn(message, category=DeprecationWarning, stacklevel=3) | |
for module in private_modules: | |
try: | |
return getattr(import_module(f"scipy.{sub_package}.{module}"), attribute) | |
except AttributeError as e: | |
# still raise an error if the attribute isn't in any of the expected | |
# private modules | |
if module == private_modules[-1]: | |
raise e | |
continue | |
def _deprecated(msg, stacklevel=2): | |
"""Deprecate a function by emitting a warning on use.""" | |
def wrap(fun): | |
if isinstance(fun, type): | |
warnings.warn( | |
f"Trying to deprecate class {fun!r}", | |
category=RuntimeWarning, stacklevel=2) | |
return fun | |
def call(*args, **kwargs): | |
warnings.warn(msg, category=DeprecationWarning, | |
stacklevel=stacklevel) | |
return fun(*args, **kwargs) | |
call.__doc__ = fun.__doc__ | |
return call | |
return wrap | |
class _DeprecationHelperStr: | |
""" | |
Helper class used by deprecate_cython_api | |
""" | |
def __init__(self, content, message): | |
self._content = content | |
self._message = message | |
def __hash__(self): | |
return hash(self._content) | |
def __eq__(self, other): | |
res = (self._content == other) | |
if res: | |
warnings.warn(self._message, category=DeprecationWarning, | |
stacklevel=2) | |
return res | |
def deprecate_cython_api(module, routine_name, new_name=None, message=None): | |
""" | |
Deprecate an exported cdef function in a public Cython API module. | |
Only functions can be deprecated; typedefs etc. cannot. | |
Parameters | |
---------- | |
module : module | |
Public Cython API module (e.g. scipy.linalg.cython_blas). | |
routine_name : str | |
Name of the routine to deprecate. May also be a fused-type | |
routine (in which case its all specializations are deprecated). | |
new_name : str | |
New name to include in the deprecation warning message | |
message : str | |
Additional text in the deprecation warning message | |
Examples | |
-------- | |
Usually, this function would be used in the top-level of the | |
module ``.pyx`` file: | |
>>> from scipy._lib.deprecation import deprecate_cython_api | |
>>> import scipy.linalg.cython_blas as mod | |
>>> deprecate_cython_api(mod, "dgemm", "dgemm_new", | |
... message="Deprecated in Scipy 1.5.0") | |
>>> del deprecate_cython_api, mod | |
After this, Cython modules that use the deprecated function emit a | |
deprecation warning when they are imported. | |
""" | |
old_name = f"{module.__name__}.{routine_name}" | |
if new_name is None: | |
depdoc = "`%s` is deprecated!" % old_name | |
else: | |
depdoc = f"`{old_name}` is deprecated, use `{new_name}` instead!" | |
if message is not None: | |
depdoc += "\n" + message | |
d = module.__pyx_capi__ | |
# Check if the function is a fused-type function with a mangled name | |
j = 0 | |
has_fused = False | |
while True: | |
fused_name = f"__pyx_fuse_{j}{routine_name}" | |
if fused_name in d: | |
has_fused = True | |
d[_DeprecationHelperStr(fused_name, depdoc)] = d.pop(fused_name) | |
j += 1 | |
else: | |
break | |
# If not, apply deprecation to the named routine | |
if not has_fused: | |
d[_DeprecationHelperStr(routine_name, depdoc)] = d.pop(routine_name) | |
# taken from scikit-learn, see | |
# https://github.com/scikit-learn/scikit-learn/blob/1.3.0/sklearn/utils/validation.py#L38 | |
def _deprecate_positional_args(func=None, *, version=None): | |
"""Decorator for methods that issues warnings for positional arguments. | |
Using the keyword-only argument syntax in pep 3102, arguments after the | |
* will issue a warning when passed as a positional argument. | |
Parameters | |
---------- | |
func : callable, default=None | |
Function to check arguments on. | |
version : callable, default=None | |
The version when positional arguments will result in error. | |
""" | |
if version is None: | |
msg = "Need to specify a version where signature will be changed" | |
raise ValueError(msg) | |
def _inner_deprecate_positional_args(f): | |
sig = signature(f) | |
kwonly_args = [] | |
all_args = [] | |
for name, param in sig.parameters.items(): | |
if param.kind == Parameter.POSITIONAL_OR_KEYWORD: | |
all_args.append(name) | |
elif param.kind == Parameter.KEYWORD_ONLY: | |
kwonly_args.append(name) | |
def inner_f(*args, **kwargs): | |
extra_args = len(args) - len(all_args) | |
if extra_args <= 0: | |
return f(*args, **kwargs) | |
# extra_args > 0 | |
args_msg = [ | |
f"{name}={arg}" | |
for name, arg in zip(kwonly_args[:extra_args], args[-extra_args:]) | |
] | |
args_msg = ", ".join(args_msg) | |
warnings.warn( | |
( | |
f"You are passing {args_msg} as a positional argument. " | |
"Please change your invocation to use keyword arguments. " | |
f"From SciPy {version}, passing these as positional " | |
"arguments will result in an error." | |
), | |
DeprecationWarning, | |
stacklevel=2, | |
) | |
kwargs.update(zip(sig.parameters, args)) | |
return f(**kwargs) | |
return inner_f | |
if func is not None: | |
return _inner_deprecate_positional_args(func) | |
return _inner_deprecate_positional_args | |