Datasets:

marin-dna
/

functional-ncrna

query_name string	source_chrom string	source_start int64	source_end int64	region_label string	species string	alignment_name string	assembly string	taxonomy_id int64	family string	clade string	phylogenetic_rank int64	alignment_source string	t_chrom string	t_start int64	t_end int64	t_strand string	t_src_size int64	pre_resize_t_start int64	pre_resize_t_end int64	fragment_count int64	aligned_bases int64	sequence string	augmentation string
fa1_ncrna_7_000099261445_000099261700	chr7	99,261,445	99,261,700	ncrna	Lepilemur ruficaudatus	Lepilemur_ruficaudatus	GCA_963574885.1	78,866	Lepilemuridae	mammals	1	zoonomia_cactus	k141_492056	60,180	60,435	+	71,117	60,307	60,308	1	1	CTTCCTAGCCCATGGGCATCTTCTCCATCCTGGAGGAACAGTGCGTCTTCCCCAAAGCCACGGATGCCACATTCAAGGCAGCCCTGTATGACAACCACTTGGGCAAATCCAGCAATTTTCTTAAGCCCAAGGGAGGCAAGGGCAAGGGGCCTGAGGCCCACTTTGAGCTCATCCACTACGCAGGCACTGTAAGTACCAGCCTCAGAACTCCTTGGTCCACACCTGCTATCAGGTCCACACTGACATACCCCTCCA	+
fa1_ncrna_2_000059778646_000059778901	chr2	59,778,646	59,778,901	ncrna	Mirounga angustirostris	Mirounga_angustirostris	GCA_004023865.1	9,716	Phocidae	mammals	1	zoonomia_cactus	MirAng_flattened_line_2429	144,636	144,891	-	168,911	144,763	144,764	1	1	GAGGTTTAGGGTTCTTCAGCAGAGGATGTTAGAGACCTCTGCAAACATTCAGGCGGCAGCCTTTCCACCACTAACCTTAGAAAAGATTATGGCAGTGGGCCCAGGGTCAGATTGAATAGATGCAGAAGTATATGCTGTGCCTTTGCTGCTCCCTGAACCTTTCTTTGTTGGCTGGGCTGACATTTTCAGTGACTTTTCTTAGAGCCTTGTTTAGACTGTCTTCCTAGAAAATTCTGGATCTGTTTACTACCCATC	-
fa1_ncrna_1_000155215673_000155215928	chr1	155,215,673	155,215,928	ncrna	Lepilemur ruficaudatus	Lepilemur_ruficaudatus	GCA_963574885.1	78,866	Lepilemuridae	mammals	1	zoonomia_cactus	k141_388305	3,761	4,016	-	9,856	3,888	3,889	1	1	CTCCCCCAGGGTGGCTTTTGCTGGAGCCAGAAAGTCCAGGTACCAATGCACAGCAATGCCATGAACATACTTAGCTGCCTCTGGGTCTCCCAGTACCTGCAAAGGGAAGGACCACTGGGGAAGGGGAGCCACTGACCCTGGGCCCTGCACAGAAGATTCTGGAAAAGGAACCTGGCGTCCTGACAAACAGGTGGTGGGAAAAATGCAACTAGAGGGGGTTAAAGCACCTACCACGGGAATCCATGGGGCCCTGGA	+
fa1_ncrna_7_000064120350_000064120605	chr7	64,120,350	64,120,605	ncrna	Dinomys branickii	Dinomys_branickii	GCA_004027595.1	108,858	Dinomyidae	mammals	1	zoonomia_cactus	DinBra_scaffold_27295	45,197	45,452	+	55,407	45,324	45,325	1	1	ATCTAACATTCACAGTTCTGCCAGTGTTGACTGTCCAGTTCTCTTCACCTTGAACCCAGGACCCACCTCTGATGTTCAGCGAGGAGTACCAGAAGAGTCTGCTAGAGCGGTACCACATGGTTCTGGATGAAAAACGCAAAGAATACGTGGTTGGAGAGCTCATCTGGAATTTTGCCGACTTCATGACTAACCAGAGTAAGTGGCAGTGTAGCTTCGGGACCCTACTGTTGCTGAGCTTTTCAGGTTGGCTTCTCA	+
fa1_ncrna_1_000144168677_000144168932	chr1	144,168,677	144,168,932	ncrna	Hipposideros armiger	Hipposideros_armiger	GCA_001890085.1	186,990	Hipposideridae	mammals	1	zoonomia_cactus	JXIK01000338.1	853,643	853,898	-	2,292,961	853,770	853,771	1	1	TCACCTGAAAACTGTCATGAAAGACATTTTTCAAGTGAGGTTATTATTAGAAATACCATTCCAGAAATCTTACCTTTAGAAATCATCCAAGGAGTGAGATCAACATTACAACCCCCATAAACTGGGTAAACAACAACACTGGAGTGAAAAATGACCACACGTGCCATAAAGCAATGTtgaagctgaaaataaaaagacaaaaaacacagTTGGGAACTCTAGCTGTAATctacacatatatattctattgTAGAG	-
fa1_ncrna_7_000102380431_000102380686	chr7	102,380,431	102,380,686	ncrna	Mormoops blainvillei	Mormoops_blainvillei	GCA_004026545.1	118,852	Mormoopidae	mammals	1	zoonomia_cactus	MorMeg_scaffold_13790	52,303	52,558	-	91,534	52,430	52,431	1	1	GTATCAAGAAAGAGAAGTGAGACACTGTTTTACCTGCATGTCACTTTTGGCAGCTTTCACAGCATCAAAGAGATCACTGGCTGGTGGTTCCGACTCTTTCTGGCTATGACCACGTACCATTTGAGACCCCTTCTTAGGATGTTTTGCCACCTAACAAGTATGGGAGATCAGGAATTTTTTTTTTAAAGTGAAAGTCACATTAACACTTGGTTTCATCATCACACAGGTAAGCTTAAGCTGCCAATTATACAGCAG	+
fa1_ncrna_X_000073831045_000073831300	chrX	73,831,045	73,831,300	ncrna	Orientallactaga bullata	Allactaga_bullata	GCA_004027895.1	1,041,416	Dipodidae	mammals	1	zoonomia_cactus	AllBul_scaffold_81027	11,082	11,337	+	18,550	11,209	11,210	1	1	CTTTTTCTTTTGTTTCTTTTCCAGATCTTCCCCAGAAAAAATAGGCTTAATTGCCTTGCAGTGTTAGTGACCTATTCCCTTTGAGGATCCCTAGGTGGAGATGGGGCATGTGGATCCTCCAGGGGAATCGCTCACTACCACTGGGCAACAGCCCTAGGTCAGGATAAGATACATTTCTGGACCTATATAGGAAGATCAAGAATCAAAGACAACCACCATACATCAAGATACGTAAGTTGTCCATAAAAGCATAAC	-
fa1_ncrna_22_000019125312_000019125567	chr22	19,125,312	19,125,567	ncrna	Orcinus orca	Orcinus_orca	GCF_000331955.2	9,733	Delphinidae	mammals	1	zoonomia_cactus	KB316916.1	9,815,445	9,815,700	-	11,745,454	9,815,572	9,815,573	1	1	CCTCATCTACCGCATGCTGCAGCCGGACGTCAACCGGCGGCTGCACATAGATGAGATCCTCAGCCACTGCTGGGTGCAGCCCAAGGCCTGGGGCCTGTCCTCTGCAGCCATCAACAAGGAGGGGGAGAGCTCTCGGGCCACCGAGCACCCGTGGACTCCTGAGCCCAGCTCCGACAAGAAGTCTGCCACCAAGCTGGAGACCCGGGAAGAGGCCCGGCCCAAGGCCTGGGCGGAGACAAGACCTGAGGAGGAGGC	+
fa1_ncrna_12_000097463253_000097463508	chr12	97,463,253	97,463,508	ncrna	Myotis lucifugus	Myotis_lucifugus	GCF_000147115.1	59,463	Vespertilionidae	mammals	1	zoonomia_cactus	GL429777.1	4,948,872	4,949,127	-	16,345,109	4,948,999	4,949,000	1	1	GTGACAACAATGACAAGGACTCAAGGACCATCCTTCTGACAAGTTTCaggtaagaaaatatttatacctCGATTCTTGTGTTTTTGCATCCCTGTGGCTGAGAGCGAGTCTCACTGGGGAAACATTTCCGTGAGGGTATCATCTCTGCTGTCACTGCCTGCAAACCTGTGTTCTTGGGGCTTTGTGTTACTAGAATCCTTGGAGGTGAGGCGTGAACAGACTGGGCGAAAGGGTGAGCTGCTTTTTATGTCTATC	+
fa1_ncrna_15_000036800499_000036800754	chr15	36,800,499	36,800,754	ncrna	Chrysemys picta bellii	chrPic2	v3.0.3/chrPic2	8,478	Emydidae	reptiles	3	ucsc_multiz100way	chrUn_KK088200v1	1,946,966	1,947,221	+	6,674,681	1,947,093	1,947,094	1	1	TACATACACTCACATTTCACTAGGAGAGCCTCTCAGAACGAGAAATTGTTTACATTACTATCTGGGGATACATGAAGTATACAGCCCATCTACAACAAATAAACtaagactaaataaataaataaagtgaaagTTATTAAAAATGATTACAAGCTGTTTTACATTTCTGCTCAGTATTGAGCTGTGTgttgaaaatgcatttttcataaaACCACATGCAAGGCTTTTTGATGGTGAAAGACACAACTCCCAATG	+
fa1_ncrna_9_000033676939_000033677194	chr9	33,676,939	33,677,194	ncrna	Muscardinus avellanarius	Muscardinus_avellanarius	GCA_004027005.1	39,082	Gliridae	mammals	1	zoonomia_cactus	MusAve_scaffold_13068	36,347	36,602	-	85,452	36,474	36,475	1	1	GCGGCCTGCGGGGCCAGGGCCAGGGGGGCTGCGGCGGCGGCGGAGGGGAGCTCTAGCGCCGGCCCGGGCCCCAGGCTGCGCCGCCGCCGCCGCCGCCGTGTTGGAGGCGGCAGGAGGGGCGAGACCAACTCTCCGGCGTCCCCAGCCCTGGGAATGGTGGCAGGCGGCTCCGACCCCCGCCCCGGGGCTGCGGCCGCCGCGTCCGCGCCGCGCTCCAGCCGCGGGAGGCGCCGCCGCCGAGCTCCGCCGGCTCCC	+
fa1_ncrna_14_000077038597_000077038852	chr14	77,038,597	77,038,852	ncrna	Chinchilla lanigera	Chinchilla_lanigera	GCF_000276665.1	34,839	Chinchillidae	mammals	1	zoonomia_cactus	JH721898.1	958,079	958,334	+	21,893,125	958,206	958,207	1	1	GTGGTTTGTGAGTGTGTCTTGCCAGACTCcagcgcgtgcgcgcgcgcgcgcgcgcgcacacacacacacaccagctgaAAATGTTAATCAGAATTAAAAGCCAGTCAGTACTATTAAAGCATCAAACGTGAAGACCTGGAGGAGGGGGATTTGGAAGAGGAGGGGCAATATGGGGGTGGGGTAGGAGGGAGTGGGAATGAAATATAATTCGGTCCTTCGCGCTGATAAAATAAAGGAGCGGAGAGGTAGCAGTGG	-
fa1_ncrna_10_000042425250_000042425505	chr10	42,425,250	42,425,505	ncrna	Equus caballus	Equus_caballus	GCF_000002305.2	9,796	Equidae	mammals	1	zoonomia_cactus	CM000394.2	81,739,343	81,739,598	-	82,527,541	81,739,470	81,739,471	1	1	CAGAACCATACCCTGTGTACAAGACAGAAATTTCTAAAGATGctttatgaaagaagaaatatcttaCCAAAGTTACTATTGCACATTCAGCTGTTAGCTGTGCAGCACTAAAAAGAGTACGAACAAATctgtaaataaatttgtgttcaGGATCATGCTCGAAGTATTCCTCTGGAATCTTTTCTcgctggaaggagagaaaatgcgAAAAAGTATCCACTGAAGAAAAATACTTAAGTACCCTTACAACAGCAG	+
fa1_ncrna_4_000112974019_000112974274	chr4	112,974,019	112,974,274	ncrna	Falco cherrug	falChe1	F_cherrug_v1.0/falChe1	345,164	Falconidae	birds	2	ucsc_multiz100way	KB397780	698,356	698,611	-	19,410,955	698,483	698,484	1	1	tttgtctttttcttttgtatacaCACAAATGACCCAATTTAGCATAGCACTGGGGGAATCTCCTGAGACAGGCAAAGGTCATGAAAATACTCATAGGAGAAAAGGTATGGCGTTATCCCCAGGCTCTGCCTACTCGGCTGTAATTAGAAAGATACCTCTTTCTTAGCAGATGGATCCCCTGGCCTCTTTCCAGTCTACATTTCATGTTGTCTATTATGGCAACCCAAACTGTGAATGaagtaagtaaaataaagt	-
fa1_ncrna_16_000033371548_000033371803	chr16	33,371,548	33,371,803	ncrna	Catagonus wagneri	Catagonus_wagneri	GCA_004024745.1	51,154	Tayassuidae	mammals	1	zoonomia_cactus	CatWag_scaffold_32614	1,158	1,413	+	44,402	1,285	1,286	1	1	CCAGCCGAACGCCTTTCGTTTTTTGCCCCCGCGGATCCTCCATGTAGGAAGCCAAGGCTGGCGAGCCCGACACTCGGGAGCCGCTGCGGGGGGGCCTCTTTTTGGGGAGGCGCCGACCCGGGTAGGCTTCGCCGCCCCCAGGGAAGCGGCGGCCGCGTTCCTCCGGGGTGCGCCGGGGCCCGAGAGCAGCGCGCGGCGCGGGCCGCGCGGGGTGGGGCAGCCGGAGCGCAGGCCCCCGAGCCCCGGCGGGCGCCT	+
fa1_ncrna_11_000032440152_000032440407	chr11	32,440,152	32,440,407	ncrna	Heterocephalus glaber	Heterocephalus_glaber	GCF_000247695.1	10,181	Bathyergidae	mammals	1	zoonomia_cactus	JH602079.1	20,940,740	20,940,995	+	22,288,213	20,940,867	20,940,868	1	1	CAAGcgtttcttttgtgtttttaaccTATAAAAGATAATGGAGTATATTTTATAGACTAGGTTTTATCTTCTCCCCATTCCCAACTGCACTTTGTTTAATAGTTGTCAGCTTCCCTTTAGCCTTGGATTTAATTATATAGGACCAAAATATTCTCTAGTAAATAGCTTGCTAAATATTTTGTCACTTTTGTGACTTCCCCTCCGAGAACTAGATTAATTACAGGAATCTACCTGGATCTGGGGACTTCTCTCCCT	+
fa1_ncrna_6_000000761782_000000762037	chr6	761,782	762,037	ncrna	Mirounga angustirostris	Mirounga_angustirostris	GCA_004023865.1	9,716	Phocidae	mammals	1	zoonomia_cactus	MirAng_flattened_line_12470	74,019	74,274	-	88,930	74,146	74,147	1	1	ATGTAGAAatttttcaaacattttgaattctgtaaaattgagaagaaactttgccaaacctattcccttcttgctttttaaacctatatacatttaaagggatattcaatacttttgtttttgaactggttatccatagcccgttaaagtgttgtcttttaaaagctatttgctattcaaggagccttaggagcccatttaaaaagcctttttaaatccttttctctgaaacaggaagttgcattttgccaagaa	-
fa1_ncrna_5_000174503781_000174504036	chr5	174,503,781	174,504,036	ncrna	Symphalangus syndactylus	Symphalangus_syndactylus	GCF_028878055.3	9,590	Hylobatidae	mammals	1	zoonomia_cactus	tarseq_265	1,725,605	1,725,860	-	1,946,362	1,725,732	1,725,733	1	1	CCTGGGCACAGGACACCATTCTCCAGGGAGACCAAACCCAGCTTCTCTACATCACCAGGAAGAAGGCAAGCTGGGCCACCAGGGCGCGGCCCCAGAAAGGAAAATCCTCCACGGTCCTGTTGACAGATGTGGTATCAAATGAATTGTTCTCTGCTTAGACACGACTTTGATATTTATTGGTTCAAATTGCTTGGCTGACTGAGTCTTGCGTAAGTCTCCCTGGTCCATTTTAATCTTGACGTTTTGGGAAGCCAC	+
fa1_ncrna_10_000025682552_000025682807	chr10	25,682,552	25,682,807	ncrna	Tupaia tana	Tupaia_tana	GCA_004365275.1	70,687	Tupaiidae	mammals	1	zoonomia_cactus	TupTan_flattened_line_237787	4,452	4,707	+	5,274	4,579	4,580	1	1	GTTTCTTCCTGCAGTTCTGGGCTGGACCACTGAGGGACACTGCTGTACTGGGTTCCACTGTGGAGAAACAAAACTGAAAGTTGGGAAAAATCAATGGCGATGAGATCACTCCCTCCCTGGACCTTTCCATTTCAAAAGAATGTTTTTCAATTTAAAACTCCAGACATTGACAATCATCATTCCTGGCCTGCCTCTTTCAGAGCTCAGTTGGAGGCCAGGTCAGGCAGGGAAAAGACTCTTTATTTTGAAGAGCTG	-
fa1_ncrna_1_000143470701_000143470956	chr1	143,470,701	143,470,956	ncrna	Solenodon paradoxus	Solenodon_paradoxus	GCA_004363575.1	79,805	Solenodontidae	mammals	1	zoonomia_cactus	SolPar_flattened_line_3610	120,426	120,681	+	310,953	120,553	120,554	1	1	CACACTACGCACATATCCTAAAATCAAGAACACAGAAACATATTTTAAATTGGAGATTAAGCTAGGAATATACTTTTAATTTTTAAAAATACCTTCTTAGCTGATATAACTCTGGAACTAGACATTAGATGATTTCAGAATACATGGGATAAAACAGAAATGGACAGGCAGGAATTCAAAAGACAATAATTTAGTTCACACCTGATGCAAAGTGAACTTGTCGCTACTGGAAAACAACACAACCGTATTGTGCAT	+
fa1_ncrna_4_000025505648_000025505903	chr4	25,505,648	25,505,903	ncrna	Panthera onca	Panthera_onca	GCA_004023805.1	9,690	Felidae	mammals	1	zoonomia_cactus	PanOnc_flattened_line_4929	153,584	153,839	+	194,828	153,711	153,712	1	1	CTCCACCCACGAAGACGCGTCGCTGACGTGCAAGCTCGAGGGCCCCGGGCACCAGCGTGTTCTGCGGGGACCCGTTGAGGAAGGCACAGCCCTCCAAGATGCTGGCCACAGCGAAGAGAGTGGAGGGCGACACCTCCAGGCCCAGCTGCGGACGTAGGCGGGCAGTCAGCACCGAGGGGTTCTTTGGGGCTCCGGCCCTGGCCCCTCTCCAACCCCGTGTGCACCCCCACCTGGATGGTACGCAGCAAGTTCTCA	-
fa1_ncrna_8_000093298563_000093298818	chr8	93,298,563	93,298,818	ncrna	Chinchilla lanigera	Chinchilla_lanigera	GCF_000276665.1	34,839	Chinchillidae	mammals	1	zoonomia_cactus	JH721877.1	9,722,332	9,722,587	+	31,710,007	9,722,459	9,722,460	1	1	aaggaaaagtatttttctctttttcaaatgctaaaaattttttttctattgtgggAAATCAGTGCATTACATCTTTCATTCCATTAAAGGAAATGGCTTATATGTGGGAATGAAAAATCTGCTGTGTTAAAATTCATAATAATACTTTTTAAGAGGCTTGACCCACAAGCTTTTTGATGGGTATGCTCAGGTTGTATCTTTCAAACAGAATTAGTTTCCGAAATTCCTGTGATGTTTGTGGAAATTGCTCACTAC	-
fa1_ncrna_2_000143799958_000143800213	chr2	143,799,958	143,800,213	ncrna	Erinaceus europaeus	Erinaceus_europaeus	GCF_000296755.1	9,365	Erinaceidae	mammals	1	zoonomia_cactus	JH835324.1	4,131,357	4,131,612	+	7,429,010	4,131,484	4,131,485	1	1	TGTAATGAGTAGTTCATACGCCTTATGTTGTTTTATCACGTGCAGTAGGTGCCATATCCCTACAGTGAATGACTTCAAGCAAGTCATCAGACTGTACTGTGTTCAAGAATGCTAATCAGAAGGAAAAGGGTCTTTTTATGACATGCTTGAAGAAACCAAGATTGATTGTAGCTTCTTGATCATAGCAGCACCAGTGGAATGGCTCTATCTCTATTAAACTTCACTTGCATTTCTGGAAAGCATGGAGTGTCCTAA	+
fa1_ncrna_11_000067797686_000067797941	chr11	67,797,686	67,797,941	ncrna	Catagonus wagneri	Catagonus_wagneri	GCA_004024745.1	51,154	Tayassuidae	mammals	1	zoonomia_cactus	CatWag_scaffold_9355	9,542	9,797	-	128,259	9,669	9,670	1	1	GCCCCTCCTTCCCCAGGACCGTCCTAGAGCTCGGCAGCGGAGCCGGCCTCACAGGCCTGGCCATCTGCAAGACATGCCGCCCCAGTGCTTTCGTCTTCAGTGACTGTCACAGCCTTGTCCTCGAGCAGCTCCGCCGGAATGTTCTTCTCAATGGCTTCTCATTGGAGCCCACTGAGCACCCAGGACACGACACCCCCAACTCAGAGAGCCCCAGGGTGACGGTGGCCTGGATGGACTGGGACGTTGTGACAGTCC	-
fa1_ncrna_4_000001123040_000001123295	chr4	1,123,040	1,123,295	ncrna	Lyroderma lyra	Megaderma_lyra	GCA_004026885.1	3,371,112	Megadermatidae	mammals	1	zoonomia_cactus	MegLyr_scaffold_10632	65,262	65,517	-	110,865	65,389	65,390	1	1	AGGCTCATGGGGATACATGGCATGTGCATTTCAGCAAGTGAGAAATCTGAGTAACAAAACATGAAAGAATGATTTACCTCATCATCGTAAGTTGTCACAGTCACGAACAGCCCCAGACCAGGAGCCGATTCCAGGAAATCATGTCTGCCCATGTCCCATTGCTGTATCTTGAAAGTCCCTATTTCAAAAAATAGAAGACGTTTATTATGAAGTAAATGTAAGGAATAGTTATATATGATTGCTGACTAACAAata	+
fa1_ncrna_3_000071570490_000071570745	chr3	71,570,490	71,570,745	ncrna	Geosciurus inauris	Xerus_inauris	GCA_004024805.1	3,371,099	Sciuridae	mammals	1	zoonomia_cactus	XerIna_scaffold_27903	31,357	31,612	-	52,494	31,484	31,485	1	1	tcatttTTATGTGTATCCAAAGCCAAGATTTCAACTTGGTGAAAGGCTGTGGAATTTATTTCCCAAAGCGTTGCCCACACTCGGCCGCCCTTTCTTCACTCCCTCCTTGCACAGAGAGGATTGCTTCATGCTCCTAATTATGCTGGATCCCTCTGTATTTTCGAACACCTGTGCGTAATTCAGATCATGGGTGGTCGCAGAGCCTGGCCCGAGCAACAGCTTCTCTCTCAGAATGAGGAAAAAAATCCCCGGAAC	-
fa1_ncrna_7_000035496000_000035496255	chr7	35,496,000	35,496,255	ncrna	Hystrix cristata	Hystrix_cristata	GCA_004026905.1	10,137	Hystricidae	mammals	1	zoonomia_cactus	HysCri_scaffold_31193	30,185	30,440	-	44,586	30,312	30,313	1	1	TGTCTTTGGTGACCTGGCAAAAAGTTTAGTTTAGCACCAAACCTATTTTTTCTTTCCTCCTAATTAATTTTATTTTCTGCCAAGGAAAATGATCATGTCTCTTTAAACAGCACCAACCCCAAAGCAAGGTGCCCCTGGAGGGAAGGCGGAGATCAATTTTCCAGCCTGGACTGTGCCGCTCTGATAGCTGGGCCTTACAGGCTTGAAGCTTTTAATTTGCTTATAGATAGAGAGGCTTGAGCTCCATACTTTACC	-
fa1_ncrna_6_000142985330_000142985585	chr6	142,985,330	142,985,585	ncrna	Myocastor coypus	Myocastor_coypus	GCA_004027025.1	10,157	Myocastoridae	mammals	1	zoonomia_cactus	MyoCoy_scaffold_5874	75,551	75,806	-	100,555	75,678	75,679	1	1	AGCAAGCCAGTGGGTTATTTTGGGGGAGAAAAGCATGTATGTACCATATACTTCAAAAATAACTCAATAACAGTATTCTTAATAGGAAAAAAATCCCATTTTTTCCTGGAACTGTGAATGGAAAACTCAGCTGCATACCATTCCATTTCAAGGATCTGTAATCTTAGACCATTGAAGAGTTCCCCTTTCCAAAGAATGTTTCTCTGTGTGGTTTCTAAACCTCCTGACTTTTTGCAAAAATTTAGCATACTCCGA	+
fa1_ncrna_9_000094175844_000094176099	chr9	94,175,844	94,176,099	ncrna	Enhydra lutris	Enhydra_lutris	GCF_002288905.1	34,882	Mustelidae	mammals	1	zoonomia_cactus	KZ291780.1	3,017,976	3,018,231	-	25,786,061	3,018,103	3,018,104	1	1	AATACTGTATAATAGTTGTCAACTTTCTGTGCGGCCGCTGGGATGTAGATGTTTCTATCACGTTAGGAAAGACAGTAGATTGTATAGTTATCTCCCAGTGGCGGGTGTGACCCTAAAACTATACAACCTACTACCTCATCCCACAGTGAAGAGAAGGTCCAGGGTCAGCTGAGCACCAGGCGAAGGCTTTCTCCTCAGTCATCCTGGTTTCCCTGTGtgatgaatggagaaaaaaatagtattagaaCAATTTCA	-
fa1_ncrna_1_000209113880_000209114135	chr1	209,113,880	209,114,135	ncrna	Heterocephalus glaber	Heterocephalus_glaber	GCF_000247695.1	10,181	Bathyergidae	mammals	1	zoonomia_cactus	JH602120.1	2,811,108	2,811,363	-	10,179,728	2,811,235	2,811,236	1	1	tatgtagttttttaaaaaatgaactccaATTGAAAAATAATGTGTCATGGCATGTTAAACTTTATGGAAATTCTTCTGCAGAATAACATAATTTCATGGTGCATTACTCTGAAATGACCTAGTACTTGAACAATTAATTTTTAAGGTGTAGCATTGACTTCCCCTTGCTGTATTTAACCCATATCTGAAATTGTCAACACTGCCAAGGGTTGGACAATAAGTTGTAAGAAGAACTGGAGTCTAAAAATTATTCCT	+
fa1_ncrna_8_000054443819_000054444074	chr8	54,443,819	54,444,074	ncrna	Eubalaena japonica	Eubalaena_japonica	GCA_004363455.1	302,098	Balaenidae	mammals	1	zoonomia_cactus	EubJap_flattened_line_11899	66,526	66,781	-	77,252	66,653	66,654	1	1	TCCTGTCACTTTAAGAAGAGGAATGTTCCCTCTGGGCACATATTTCATTAACAGAGCATTATCTCCCAGAGTAACTAAGAACTTTCAAAAGAAGGGTGATGGTTATAAGAGCCTCTAGATAATTTGGACTGATTAGGTATCTTAATCCAGTTGCCAGTTAATTGTGTTTGTTTGTGATTAAGAATATGATTTTCACCTACTCCCCCTCCACAATCTCGCTGTGTTTGGAGAAGGCCAATCTTCATATCTGCAGCC	-
fa1_ncrna_7_000063241526_000063241781	chr7	63,241,526	63,241,781	ncrna	Orycteropus afer	Orycteropus_afer	GCA_004365145.1	9,818	Orycteropodidae	mammals	1	zoonomia_cactus	OryAfe_flattened_line_16781	36,401	36,656	-	61,717	36,528	36,529	1	1	CTGTGCTTTGTAAGTTTGATAATTTTGTTCCTTTAATAGAAGCAACTCATATTTCTTTATAACAGAACGCACATGCAGGACTTGAAAGATGTCACTAATAATGTACACTATGAGAACTACAGAAGCAGAAAACTGGCAGCTGTGACTTATAATGGAGTTGATAACAACAAGAATAAAGGGCAGCTTACAAAGTAAGTATATATATTTTTGTCCCTCCAGAAAGGTATTATTATGTGGTAAATAAATATGTTAAAT	-
fa1_ncrna_8_000127401658_000127401913	chr8	127,401,658	127,401,913	ncrna	Mirounga angustirostris	Mirounga_angustirostris	GCA_004023865.1	9,716	Phocidae	mammals	1	zoonomia_cactus	MirAng_flattened_line_2579	53,667	53,922	+	165,408	53,794	53,795	1	1	AAACGGAGACACTAGACAAGGCAATTTGTAATGGCTAAAAAATGCCTTTCTAAGTACCATCGAATGCACTGGCTTCTTGGCATTCCCAGAGAACGCTCTCCCCAGATATGCCCAGAGAGACGACACCATTTAGGGGTTCAGGGACCACATAAAGGCAGATGATGGATGTTTTCCTTGGGGGTGATTATGGCTCTTTCGTCTAATAGCTCCCCTATTCATACTATATTAAGGGCTTAATAAGACCTGAAAAGGTGC	-
fa1_ncrna_12_000072262663_000072262918	chr12	72,262,663	72,262,918	ncrna	Falco cherrug	falChe1	F_cherrug_v1.0/falChe1	345,164	Falconidae	birds	2	ucsc_multiz100way	KB397268	2,750,316	2,750,571	+	3,078,482	2,750,443	2,750,444	1	1	TAGTGTCTACCTGATTcagttttccagcatttttaatactcttttaaatattaatagttAAAGCATAACAAACACAAGATCATTTTAGAGTAGCTAATGTACAGTTCTGTAAATCCAGTAAGCGATGGCTATTAATGTTCTCTTTTGTCTTCCAGacagaaaatcaaagctttttaaattaaaggatGCATATAAAATCAATGTATGTTGATAAGGTGTGCACATTAACGATAATGTTTGCAAACATTCTTTGTA	-
fa1_ncrna_1_000213326222_000213326477	chr1	213,326,222	213,326,477	ncrna	Lepilemur ruficaudatus	Lepilemur_ruficaudatus	GCA_963574885.1	78,866	Lepilemuridae	mammals	1	zoonomia_cactus	k141_372796	16,612	16,867	-	26,328	16,739	16,740	1	1	AAAAAAGACAGCAGTCAAAGGCAATCAAATATGTATTTAATTAAAGCAAACATAAAAATAAAAGTTACATGTTGAATCAATAAACAGCACTTTTTTCTACATGCATTTTGAACAAGACAGATCAGAATCTTGCATGATGAAGACATAATGTGTCATAATAATTAGGAACACAGACAAAAGAACAGCTAATCAGCATGCAAATGTATGCAGTTCTGGTGATTCAGATGAGGCAGATTTCTACCTCTTTTTTGCTTG	+
fa1_ncrna_3_000149275501_000149275756	chr3	149,275,501	149,275,756	ncrna	Capromys pilorides	Capromys_pilorides	GCA_004027915.1	34,842	Capromyidae	mammals	1	zoonomia_cactus	CapPil_scaffold_111893	2,969	3,224	-	8,649	3,096	3,097	1	1	AAGTATAGGGCCTAGAGGCGAAGTTTTTTAAATGTATATAAACTTCATCTCCCATTTCAGCTTTGACAATTGGGCCTAAAAGCCCTAGCCAATCTGGTTTTTCTATAGTTGCACTAAAGGTTCCATCTGTGTACTGATGATAAAGGGCTTTCTTGTATGTTCTTCCAATTCTGTGTGGGCCATTTTGAAGATACATATTGTACTGGTCCCTGCAAAAGAAAACAAGATAACTTGATCCAAAGCCAGTATTTCTGA	+
fa1_ncrna_15_000084202281_000084202536	chr15	84,202,281	84,202,536	ncrna	Tapirus indicus	Tapirus_indicus	GCA_004024905.1	9,802	Tapiridae	mammals	1	zoonomia_cactus	TapInd_scaffold_1915	27,972	28,227	-	496,359	28,099	28,100	1	1	TGGAGCTGGTGCAGCAGGGGGCAGACACACCGTTCATGCAGCAGGCTGAGAGGCATGTACCTACCATGGCTGACGCTCCTCAGGGGTCACTGATAGTGATTCTGAAAGACAGCACGAAATCAACATGGCAGTTCACACGCACGGATGGGGCAGGCCTGGGGGTGGGGAACACGCACACGCACACGCCCGGGCGTGCACACACATGCTGTAAGGCCCTACAGCCCTGCATGCCCACGCTGACACACATGCCCACGA	-
fa1_ncrna_2_000231436950_000231437205	chr2	231,436,950	231,437,205	ncrna	Loxodonta africana	Loxodonta_africana	GCF_030014295.1	9,785	Elephantidae	mammals	1	zoonomia_cactus	GL010028.1	100,505,618	100,505,873	-	111,286,942	100,505,745	100,505,746	1	1	ATCGCTCCCAGCTCATGATGCGCACCCGAATCCTTGCCCAGGGCTTCACGGTCGCAGCCGTCTTGGTGGGTATGGCTGTATCTGCTATGAAGCCTCGACACTGAGCCCCAGCCTGGCCTGGAAAGCGCCGCGGAGATCATTCCCAGCCCCGGGAGCGGCCACACCACGCCGGGGGTCTTAGTCTCTTAGCTTCCCTAACAGGCCCCAGTGCTGATGGGGAAGTGGTGGGTTCCCCCAGGCCGGGCTGGTTGTGTA	-
fa1_ncrna_16_000035023008_000035023263	chr16	35,023,008	35,023,263	ncrna	Noctilio leporinus	Noctilio_leporinus	GCA_004026585.1	94,963	Noctilionidae	mammals	1	zoonomia_cactus	NocLep_scaffold_9293	90,241	90,496	-	126,245	90,368	90,369	1	1	CCGGCCGGCCGGGGTGGGCGGCCGTGAGGTCCAGCGCGCCTCCGTTTTCGGGGCCGGGCGCCGGGCTGTCCGGCCTCTCGGTCTTCAGCGGCATGTCCGGCGGCTCCTCGTGGCTGCTGAGGCCTGGGGACTTGCAGGGCAGGCTCTCGCTGTGGCTGTGGACGGGGGACAGGGCCTGCGTGGAGGAGGACGACTCGGACGGGGCCGGGCTGCCCGCGCTGCGGCTCTCCAGGTCGCCCCCGGCGGACGAGGAGT	-
fa1_ncrna_20_000029489908_000029490163	chr20	29,489,908	29,490,163	ncrna	Gasterosteus aculeatus	gasAcu1	Broad/gasAcu1	69,293	Gasterosteidae	ray-finned_fish	6	ucsc_multiz100way	chrIX	5,865,890	5,866,145	-	20,249,479	5,866,017	5,866,018	1	1	ACGCGGAAAGGATCAAATTACTGTTAAGACTATAAAATTGTGTGAAAAGTGCAGAAGAAAGGCACTACTGTTGTCGTAGTTTGTCTTTGTTTACTCACCTTGTGTCTGAGAGCTTGACGGCAGTGAACTGTTCTGGGGGGTCGGGTCCTTCATCGGCTGGAACACACACAAAACATTTACCCTTTAACAGATCTTACACGTCGAGTGGTATTCTATTATTTAAATGGATCTATAAACTGGATCCCCCCCCCCCCC	+
fa1_ncrna_1_000163863968_000163864223	chr1	163,863,968	163,864,223	ncrna	Chrysemys picta bellii	chrPic2	v3.0.3/chrPic2	8,478	Emydidae	reptiles	3	ucsc_multiz100way	chrUn_KK083078v1	2,128,010	2,128,265	-	2,316,977	2,128,137	2,128,138	1	1	TCAAGGGAATGGCGTATGGCGAGCCAGTGCTTTGAGAACGGAACTGGCAGAAGGTGCAGATGGAAAGGCAGGACGGGCCTTTCCCACAAACCCATTAAGAATGTTGCTTGTCTGAGTGACAGTATGTCGCGAAaggcaccagcagaggtgggtgGATTTGCCTCCGGCACTCCTTTAGCAAGGTCAGGAGAAGAGTTAATTTCAAAGGTTGCAACTTTCAGCGTCAGTCTCGTCTGTTGCAGGGCTGgttccccc	+
fa1_ncrna_1_000083697839_000083698094	chr1	83,697,839	83,698,094	ncrna	Pelodiscus sinensis	pelSin1	PelSin_1.0/pelSin1	13,735	Trionychidae	reptiles	3	ucsc_multiz100way	JH208030	3,107,433	3,107,688	-	3,895,118	3,107,560	3,107,561	1	1	ACTGAATAATCATTTTTTCCAGTAGAAAGTATCTTTCAATtctaaaataatgcacatttaaTATATACGGGTGCCTTGGAAGCAGATGTCTCCTTGACATGTGCATTCAAGCTGTTGGTGGTGACCTTGTAGggtgaaatagttttgaaaattAGTTTTTGCCTCCCAATCTGtgaaaataatgctgtagtgaaGATTTAATAAAAGTCATAGCTTTTCACAGAAGCTTATTTCAGCAAAGTCAACTATtaatta	-
fa1_ncrna_X_000045885776_000045886031	chrX	45,885,776	45,886,031	ncrna	Dinomys branickii	Dinomys_branickii	GCA_004027595.1	108,858	Dinomyidae	mammals	1	zoonomia_cactus	DinBra_scaffold_59755	16,844	17,099	+	17,472	16,971	16,972	1	1	GCTGAAGAAGTTCTAAATTGTAACTCCCAGGGTTTTAAGTGGTGAGAAGAGTTTTCTTCACATGCAACAAAAGGCAAATCAGTTAATGAGACTGAAGGAGAAGTGTTATGAGTCTGCAGAGAAAGTGAGCTACACGCTTGATTGGCATATTGAAGGAGAGGTGGAGAATGAATGGAAAAATCTACAGGCAAAATTTACAGTTGCCTTTTTAACCTCAGAAGTGAACAGGCATGAAGACAGAAAAATAAATGCTTT	-
fa1_ncrna_11_000115505321_000115505576	chr11	115,505,321	115,505,576	ncrna	Nannospalax galili	Nannospalax_galili	GCF_000622305.1	1,026,970	Spalacidae	mammals	1	zoonomia_cactus	KL204078.1	3,443,498	3,443,753	-	4,389,134	3,443,625	3,443,626	1	1	AGGTAAGAGAGAGTCTCCCATGTTACTTCTCCAGGACTCAAACCCACTCCCTCTCCTATGCCTTCAGCCCTTACTAAGGCAGCTACAGACCAACAGGTTCTCCCAACTTCCCATGTGTCTGGGAGAGGGTTTCCTGAATTATCTCTGGACGCTCTCACTGCTTGAAAttatctttgctttcttttcaacCAGGCAGCCGGCTCTCTTGTTCGtctacttttaaattattttcttctcctCTAGAAGATCGTGTGG	+
fa1_ncrna_12_000090112165_000090112420	chr12	90,112,165	90,112,420	ncrna	Myrmecophaga tridactyla	Myrmecophaga_tridactyla	GCA_004026745.1	71,006	Myrmecophagidae	mammals	1	zoonomia_cactus	MyrTri_scaffold_14536	50,515	50,770	-	82,800	50,642	50,643	1	1	TCAGAATTACTGCATGGCTATTTCTCCACTATGACATAGCATCGTGTGTCGTCAATCACATGTACTGCTCACCCACCAATGGCAGTGATTTTCAAACACAATAAAGATATCTCCACTCGGTATCTCTCTCTCTTGATTATACTGCAGGCACAACCTGTGTGGGGAAACAATATCCTGGATCATACTGACAGTTCTTACAGATGGAACATTAGTGGGAGGAGTTGCCAGCTACTTCCCTGCCAACTTGTTAGTGCT	+
fa1_ncrna_11_000081429974_000081430229	chr11	81,429,974	81,430,229	ncrna	Hyaena hyaena	Hyaena_hyaena	GCA_004023945.1	95,912	Hyaenidae	mammals	1	zoonomia_cactus	HyaHya_flattened_line_26052	23,899	24,154	+	57,295	24,026	24,027	1	1	GGCTGCAGGAGACAATAAAACAGGCTATGAATTCCTGAGCTGCTTTCCATTTGTAGGAGACATTAAACTCCACAAGATTGATCAGATTTCACATCACTGGTCCCAGGAGCCCTGACAGTGCCTCAGATAATTATTTAATTTATAGCAGTAAATCACATTTGGATCATAAAATTCCAGTTAGATGAGTCCATGGAGCAAACATGTAATTAAGATTAGGGTCCCCACAAAGAAGGCAATTATTATTTATGGTCATTA	+
fa1_ncrna_7_000005117098_000005117353	chr7	5,117,098	5,117,353	ncrna	Nycticebus coucang	Nycticebus_coucang	GCA_004027815.1	9,470	Lorisidae	mammals	1	zoonomia_cactus	k141_7799381	7,677	7,932	+	14,543	7,804	7,805	1	1	CCTTTCTGCCCCCACCCCAGGCCCCAACACTGGCCACTGGCCTGAGTCCAACTGGACGAGCCCACAAGAGTTCGTGATCCTGGGCTTCTCTGGGTGGCCGCAGGGGATCCGCGTGCTGCTCTTTGCACTCCTCCTGCCGCTCTACTTGGCTACACTGGCGGGCAACCTGCTCATCCTGGGTCTGGCCCTGGTGGACCCAGCCCTGCACACGCCCATGTACTTCTTCCTGGGGGCTCTGTCTGCTGTCGAGGCCGC	+
fa1_ncrna_18_000076493663_000076493918	chr18	76,493,663	76,493,918	ncrna	Nannospalax galili	Nannospalax_galili	GCF_000622305.1	1,026,970	Spalacidae	mammals	1	zoonomia_cactus	KL204029.1	6,723,977	6,724,232	+	10,083,859	6,724,104	6,724,105	1	1	CcctgggagggaaaaaaaaaaaaaaacacacccaCTCCAGTTTTTTTCCTCCGCAATGATTTCAAAGACATTAAATCTTTTTCACTTTATAAGTGCCGATTTGTTCTGCCTCAACTCCCACGggcttttatttgcatttcaaatTCCACAGGTTACAAACCAGTCGCCTTTTCAAAAAATGTAAACCAACAATAAAGCAGTAAATGGCTTTTTTGTGCATCTGGATTAAATAAAGCACcgaatgaatatatttaa	+
fa1_ncrna_1_000027504434_000027504689	chr1	27,504,434	27,504,689	ncrna	Scalopus aquaticus	Scalopus_aquaticus	GCA_004024925.1	71,119	Talpidae	mammals	1	zoonomia_cactus	ScaAqu_scaffold_25015	22,350	22,605	-	49,295	22,477	22,478	1	1	CATCCCGCCCAAGGTCACTGGCCAGCAAGTGGCTGTCCTTCGGGCTGCCCTTCCCTCCCACCCGAGCCAGCCCCCACCAGCCTCCCACTGTAAAGCCTCAGGTCTCCTGGGCCATTAGGAATCTGCCAGGCGAGGCGTGGTCTTTTTCCTCTCTCTTGTTTCTTGGCTTGTTTTCCTGGTTCTCCAACAGCCGCCTCCTGCAAAAGCCTCCGGGTGCGTGCACAGGAACATTTTTCTTTAAAAAAAAAAAAAAAA	-
fa1_ncrna_1_000085493524_000085493779	chr1	85,493,524	85,493,779	ncrna	Homo sapiens	hg38	hg38	9,606	Hominidae	mammals	0	human_reference	chr1	85,493,524	85,493,779	+	248,956,422	85,493,524	85,493,779	1	255	TAAAATAATATCAGAGGTTGCTCCAATATTGAACAAACATTGCACACCTCTTAAATAGAGAAATTTAAATATTTTCTTTTTAAAATTCTGACATTCCAAAAGAGTCAGTTCAGAAGGTAGATACTTTAAAAAATGTGGGCTTATACTTGGAGCCACATGGTTATTGACTAGAATTTAGTTAAGCATGTGCCTGGAACGCTAGACCTGCTGCCTTTCACAACATTGCTTTTGGAACTCAGCATCTCTCCACTGTTG	+
fa1_ncrna_8_000073300112_000073300367	chr8	73,300,112	73,300,367	ncrna	Balaenoptera acutorostrata	Balaenoptera_acutorostrata	GCF_000493695.1	9,767	Balaenopteridae	mammals	1	zoonomia_cactus	KI537922.1	7,895,575	7,895,830	+	17,500,394	7,895,702	7,895,703	1	1	GGCTCCTGAATTCTCCAGCTGTTTTTCCCCTAAGCATCTAAacttaagaatttattttctaaattgagtcaaaaaattcattttataattggaatTTCTGGCTTCTTGCCAAGACTTACAGACCTTTTAAGAAGAGCTCTAGcaaccaaaatttaaaagaagacttactataattttatagtgatttattttgtgtgttttgaggGGCGAGGTTTAAGTGGTACAAGTTACCACCTGAATTCAACTTCCCTTCCA	+
fa1_ncrna_8_000046579190_000046579445	chr8	46,579,190	46,579,445	ncrna	Petromus typicus	Petromus_typicus	GCA_004026965.1	10,183	Petromuridae	mammals	1	zoonomia_cactus	PetTyp_scaffold_53548	3,453	3,708	+	23,357	3,580	3,581	1	1	TTTATTTATTTATTTTTTACACATAGAACTTTTATTTTTGTCAAGCCCAAGTCAGCCTGAGTGGTTGACTCCTATTGGTCCCCACCCACCCACCGCCTCCCCATCTTCACAGCAAGAAGAAACATTTGCTTTCCCTCCACAGAGTGGAGCAGGGCACCTAAGCCTTGGTGGCTGACTTGCAATGGGTCAGAGTGTAGGCCCAAGGGCTGATGGCACCGATTCCCTCGGTGTCCAGTAGTGGGTTAGACACCTGGG	+
fa1_ncrna_1_000026621198_000026621453	chr1	26,621,198	26,621,453	ncrna	Spilogale gracilis	Spilogale_gracilis	GCA_004023965.1	30,551	Mephitidae	mammals	1	zoonomia_cactus	SpiGra_flattened_line_7625	35,326	35,581	+	133,203	35,453	35,454	1	1	GAATGTGAAAGCTGAGCGCGAGCTGCGGAGTTTGTACCGGAGCTCGGGGAAGGCGGGGCGAAGCTGAGGTGAAGGGGTTAGTCAGTAGATAGGCAAGACGCGCCACCTCCCCCGAAAAGAGAGAGCTGGGTGCGGGGGAAGCTCTGAGGTGGCGGCAGAGGAACGTGGGGGGAGGAGGGGAAACCGAACGCTCTCTGGAAAGGGGCGGGAAGCGCGCACCACTGCGCGCATGCGCGCGCCCAGCTCCTCCGGCTC	-
fa1_ncrna_20_000035565036_000035565291	chr20	35,565,036	35,565,291	ncrna	Loxodonta africana	Loxodonta_africana	GCF_030014295.1	9,785	Elephantidae	mammals	1	zoonomia_cactus	GL010046.1	34,800,087	34,800,342	+	48,870,786	34,800,214	34,800,215	1	1	CCACAGGGCTGGATATTAAGTTGCTCCCCcatttccctcctccctctcaggaCCCAGACTTACTCTCCAAAGATGGGGTTGAGCTGCTTAGGTATGTAGCGCTCCTTGGTGTCCCGACGCTCCCGACCAGTGCTCACTACCACATATGGGTCTGCTTTGCCGTTGGGATCTGCAGGTGCCAGGTTGGTAGCCTAGGGGGACAGTATGGAGTGGAATTGGGAGAAGTGTCCTCGTCATAGCCCAAGGTTAACCTTT	+
fa1_ncrna_2_000189407488_000189407743	chr2	189,407,488	189,407,743	ncrna	Ailurus fulgens	Ailurus_fulgens	GCA_002007465.1	9,649	Ailuridae	mammals	1	zoonomia_cactus	LNAC01000004.1	8,759,436	8,759,691	+	11,493,460	8,759,563	8,759,564	1	1	AAGTTAATTTATTTGTTGCTTTAGAAAGAAATTCTGTTTCCATTAAAATTATGTCTCTGGGTAGGTGGTTCATAAACAGAGACCCTGGAAGTGGAATCAGTCTCTTGAGCCTATTTACATTCTTAATCATACACAGCTGCTGAGCTGTGgaggattttgaatttttaaaaagcagagtctTATCTTTTGTGATTATAATATTAGATCATGATCACATAAATACAGAGCCAAAGTAACATGATCGATCGTTTAGGA	-
fa1_ncrna_19_000015910562_000015910817	chr19	15,910,562	15,910,817	ncrna	Nycticebus coucang	Nycticebus_coucang	GCA_004027815.1	9,470	Lorisidae	mammals	1	zoonomia_cactus	k141_4240803	3,651	3,906	-	29,956	3,778	3,779	1	1	GATAAACAATTCAATGGCTCAAATGTCTAAAACGCAATTGTTTAAAAATGAAGTAAATGGATGTTTCTTGTCATCAACATATCCCTGATCTTTTTTGTTGCTAAGAAACACATGAGCATAATTGGTACCTCTGTTTCTTCATTCTGTTAATATCCAATGCAGAGACAGTAAAAAACATTTTATAATTGGGGAAGTATGTTTCCATTTAAATCTTCCTGAGATATGCTTTTCCACCCAATGTTTTGCTCTGCATTT	+
fa1_ncrna_3_000054047780_000054048035	chr3	54,047,780	54,048,035	ncrna	Oryctolagus cuniculus	Oryctolagus_cuniculus	GCF_000003625.3	9,986	Leporidae	mammals	1	zoonomia_cactus	CM000798.1	65,324,262	65,324,517	-	116,251,907	65,324,389	65,324,390	1	1	GTAGTCACAGTAATTTCTCCAGCAATACCATAACTTCCAAAGGGAGTACGTTTGTCACCAGATCCTGAACCTTTTTTAGCTACATCTTctactgggaaagcaacagaaagaaaaactgggCTTTGTGGCCTGGGGACGTCTTTTCCACTCGGAGGAGGACTAGCGTTCTGGGGACTTGGGGTGTGCTTCTGGAATTTTTGATCTGCAGGAACAGCAATGGGTACTTGTACTGCAGCGTATCTCTTCATGGCATCT	+
fa1_ncrna_14_000085516687_000085516942	chr14	85,516,687	85,516,942	ncrna	Heterocephalus glaber	Heterocephalus_glaber	GCF_000247695.1	10,181	Bathyergidae	mammals	1	zoonomia_cactus	JH602047.1	16,686,441	16,686,696	-	42,019,962	16,686,568	16,686,569	1	1	TGTTACCTTGGAAATCGGTAAAAGCCCAATCTTGAGTAAAGATAAATTACAGATGAAAGTATTCTTAAAAGGAACGAAATGGGATAGAAAATATGTAACTTTTTAGGGAGAAAAGGCAGATTCTTTACTCATTTTATCTCTTAAGAATGAGATGTTACAACATCTGCTCTCCAAATCATTATTTCCTATCAGTGTGGatttctcctccatctcctccctaATGTTTTTCTGAGTTTTCAGATGGGCTTTCTTCCT	+
fa1_ncrna_12_000116534274_000116534529	chr12	116,534,274	116,534,529	ncrna	Microcebus murinus	Microcebus_murinus	GCA_000165445.3	30,608	Cheirogaleidae	mammals	1	zoonomia_cactus	CM007681.1	6,609,299	6,609,554	+	31,815,103	6,609,426	6,609,427	1	1	ACAAATTAGATAATCAGGAGAATACAGTAATTGCTCTCCCTGTGCCCGGCCCGCCCGGCGGAGCCCTCCGCCGCCCCTCCGGGCTCCGGCCCCGCGGGTCGGGGCCGCCGGGTCTTCCCGACCCCCTCCCCGTTGCTCCGCCGCCCTTCCCGCCTCGCGCGGTCCCCCTGCTCCGCGCGCGCCCGTGCGCCGGAACGCTCGGCGGACTATGATGAATGATCACCTGTCACGGCTTGTTTATTATAATGCAGGCAA	+
fa1_ncrna_11_000059560224_000059560479	chr11	59,560,224	59,560,479	ncrna	Tapirus indicus	Tapirus_indicus	GCA_004024905.1	9,802	Tapiridae	mammals	1	zoonomia_cactus	TapInd_scaffold_9578	136,988	137,243	-	151,619	137,115	137,116	1	1	TAACGTGTCCGTTAGCTCGCAGCGCACACGATAACATGGTCTTCATTTACTGGAGCGGAATACATTGTGTGAgcccggatagctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcgAGGCTTCCGTTTTCTTTCTCAATAATTAAAAAAGGAGAACCAGCTTTAGGGTGCTGTGTTGGTTAGCCGGTTGCCTGTAGAGAAGGGAGTAAAATCCTGGGGGTGTATGC	-
fa1_ncrna_14_000026598459_000026598714	chr14	26,598,459	26,598,714	ncrna	Dasyprocta punctata	Dasyprocta_punctata	GCA_004363535.1	34,846	Dasyproctidae	mammals	1	zoonomia_cactus	DasPun_flattened_line_27305	13,696	13,951	-	52,619	13,823	13,824	1	1	CGCAGAAACTAAGGGGGCCGCGAAAAGCGTCGGGCGGGAAGGCGGGAAGCCGAGGTTATTGACAGCCGTGCCAGCCAATAACACGGAAATGTGGGAAAGGTCCTCGTGCCGCTTCCCAATCAGGACACTTGCGGGCTGCGAGGCGCGGACGGGCGCGACGGGGACTTGGTCCAGCTGGGACCCGGGCGGCGACAGTTTTGGCTGCGCGGAGAAGGGCATCCGAGTGACCGGGGACAGCGGGCGGCCCCGCGGGGG	+
fa1_ncrna_7_000075836075_000075836330	chr7	75,836,075	75,836,330	ncrna	Orcinus orca	Orcinus_orca	GCF_000331955.2	9,733	Delphinidae	mammals	1	zoonomia_cactus	KB316913.1	12,100,502	12,100,757	-	17,005,112	12,100,629	12,100,630	1	1	atttaaaaaaaaaaaaaaaaaaggaaaaaaaaaaaaagaaacctttacaTGAATTTTAAATCCTATTTTAGAACATAAAGGAAACAAATCCATCATTGGCCACACAGCCCCAGTCTGTCACCCCTCCCACCAGGGAGCACGGACGAGACTTCCGGGTCCTGGTCCATGCACGGATTTGCCAGTCTGTTTAACTGGTGTCCAtctgaaacagagaaagagaggttCTCGCTCAAAATGAGGTCCTCCTCCAGTTGG	-
fa1_ncrna_2_000131829780_000131830035	chr2	131,829,780	131,830,035	ncrna	Hydrochoerus hydrochaeris	Hydrochoerus_hydrochaeris	GCA_004027455.1	10,149	Hydrochaeridae	mammals	1	zoonomia_cactus	HydHyd_scaffold_4205	66,472	66,727	-	293,434	66,599	66,600	1	1	CCCCGTGGCCCGGCCCGCTGCGCCCGCGCCCTTCAACAAGCGCCACTGCCGCAGCTTCGACTTCCTGGAGGCGCTGGACGCGCCCGCCATGGAGGCCCGGCCTGAGCCGCCGCCCCCGGAGCCCGCGCCGCAGCGCGCCCGGCCGCGCGACGGCGAACCGCGGCGCCGCGCGCGCTCCAAGAGCGCGCCCCGTGTGTCCCCGGGCCTGGCGCCCGCCCCTGCCTCACCGCCCGTCCTGCAGCGCCGTGCTCGGGA	-
fa1_ncrna_4_000041872954_000041873209	chr4	41,872,954	41,873,209	ncrna	Ateles geoffroyi	Ateles_geoffroyi_a	GCA_004024785.1	9,509	Atelidae	mammals	1	zoonomia_cactus	k141_970541	61,485	61,740	-	128,724	61,612	61,613	1	1	TCCTTCAGGAACAATGCCAACATTGAAGCCCTCGGTTGGAGTCTGCACAGTTGGAGATCTTTGGTGCCATTTTAGACATCTTTGGATTTCATCAATCAAACTGACTGCAATTTTCCATAAAAACCCTGAATTTGGGTCAGAAAGTGGGCAAAGTAGATAAAGATCATTCGAGCTGTCTTATAAGATGATAAATAGATATCCTTTCAGGCCAACAATGCCAAAGTGCAGTTTTGTGATTCCCTTCCATGGGTTCTG	-
fa1_ncrna_2_000143799958_000143800213	chr2	143,799,958	143,800,213	ncrna	Enhydra lutris	Enhydra_lutris	GCF_002288905.1	34,882	Mustelidae	mammals	1	zoonomia_cactus	KZ291748.1	87,491,355	87,491,610	-	108,041,993	87,491,482	87,491,483	1	1	TTAGGACACTCCATGCTTTCCAGAAACGCAAGTGAAGTTTAATAGAGATAAAGCCATTCCTCTGGCACTGCTATGATCAAGAAGCTACAATCAATCTTGCATTCTTCAAGCATGTCATAAAAAGACCCTTTTCCTTCTGATTAGCATTCTTGAACACAGTACAAGCTGATGACTTGCTTGAAGTCATTCACTGTAGGGATACAGCACCTACTGCACGTGATAAAACAACATAAGGCATATGAACTGCTCATTACA	-
fa1_ncrna_14_000099277750_000099278005	chr14	99,277,750	99,278,005	ncrna	Cavia porcellus	Cavia_porcellus	GCF_000151735.1	10,141	Caviidae	mammals	1	zoonomia_cactus	DS562969.1	3,394,891	3,395,146	+	4,089,789	3,395,018	3,395,019	1	1	tacaaaacaacagaTGAGATCTCCCAGAGTCCTTTCACTTTTTCTAGCTCTGGAAGGCAAATCCGAAACAAGGTGTtggctgatttttgtttttatgttttggaaAGCGCCCCCCGTTGCAGCCTTCTCCTTGCTGAGCCTGCCTCTCGGCAGCAGGATGCTGGCCTGactcctgtttctctctcctgCTCAGTTCTTCCAGAAGCCAGAGCTTCCCCCTCACTTCCTTTGCAATGTATCACAGCACAGAGGAAT	-
fa1_ncrna_20_000035602059_000035602314	chr20	35,602,059	35,602,314	ncrna	Dasypus novemcinctus	Dasypus_novemcinctus	GCF_000208655.1	9,361	Dasypodidae	mammals	1	zoonomia_cactus	JH581776.1	343,140	343,395	-	570,788	343,267	343,268	1	1	TGGCCGCGGCCAggcccttctcccctccccaccgcaCCCCAGCTCACTTCTCAATGTCCGAACTGTGCCCGAGGCCCAGGGGTGGCAACGAAGGGGACAGGTCCCCGCGCGCCTTCACTGACAAGGTGACCTTGACGAAACCCTTGGTCCCGGCGCGGGTGTCCCGGGGGTCGTGCAGAGGAGCCCATTTCTGGTGGAAGTGGCCATCTGTGGACAGAGGGGCGGGCCGGAGGTCAGCAGAGACCAACGGGATGC	+
fa1_ncrna_3_000147945942_000147946197	chr3	147,945,942	147,946,197	ncrna	Noctilio leporinus	Noctilio_leporinus	GCA_004026585.1	94,963	Noctilionidae	mammals	1	zoonomia_cactus	NocLep_scaffold_2751	23,139	23,394	-	306,606	23,266	23,267	1	1	GCTCAAAAGGGAGCTGCTTAATGCTTAACAGATGAGCCAATTGAGTTTTTAAATGCAAAATTAAACTTAAAGTGCACAAAGAGCACAGGGGAATCCACAGCCAAGTATAGACTGAAGGAGGAGAGTGAGCCTGAGCAGCAGGCTGTGGGGAGACAGCCTCTTCTACTGCAACCAGAAGCAAATGGGAGGGAGGTACAGGCACATCCATCCTTTACTCAACTTTCAAACAGGCTATAATCACACTCTGTATCGCCA	-
fa1_ncrna_1_000068331122_000068331377	chr1	68,331,122	68,331,377	ncrna	Daubentonia madagascariensis	Daubentonia_madagascariensis	GCA_004027145.1	31,869	Daubentoniidae	mammals	1	zoonomia_cactus	ctg14	46,227,081	46,227,336	-	53,585,628	46,227,208	46,227,209	1	1	CAGACCAGATGGAAATGATTGGAGATCATTAAATAAAACATTGTTAGGTCATTTCCAGCATGTAATCAGCAACAATGGCTGTGGTTAGAGTTGTAATATAAACAGATGGAAGAGAGGATGACTCACTGAGTACCAGGATTATTGAGGTATCACTAACACAGAACCTCTAAGAAATAAGCTCAGGGACTGCTGAGCATGGGTGGGGTTGAGTGGAGCCCTAGGCTGAAGGGATGGTGACTGGCACTGAGTGATTAT	-
fa1_ncrna_19_000054430605_000054430860	chr19	54,430,605	54,430,860	ncrna	Galeopterus variegatus	Galeopterus_variegatus	GCA_004027255.1	482,537	Cynocephalidae	mammals	1	zoonomia_cactus	GalVar_scaffold_61966	6,708	6,963	-	23,177	6,835	6,836	1	1	TGGAGCTGGGAGTGGATGTTGGCCAGAGCTCGCTGGGACAGAGTCAGCCTCTGCAGGAAGACGGAGGGAGGGGGGAGGCCCAGTAGTCGACGCCCCCAGCCCTCTCTCATTTCTGGAGACCTAGGACTCTGGGCCCCTGGCACCTTAATCCTCCCCTGGAACCCAGGCGCCCAGGCCCCAGCCCTGCCCTCCTCCCTTGAGAAGTCCAGATTCCTGGTCCTCTCAACCCTCATTTCCATGCCCGCAGCCCTAACC	-
fa1_ncrna_1_000167617503_000167617758	chr1	167,617,503	167,617,758	ncrna	Anoura caudifer	Anoura_caudifer	GCA_004027475.1	27,642	Phyllostomidae	mammals	1	zoonomia_cactus	AnoCau_scaffold_251	106,679	106,934	+	720,054	106,806	106,807	1	1	GAGGAAATGGGAGCCCAGCTCCCAAGTGGCTGCTCCTGCAAAGGCGGCCAGCCCCCCACTGCCCCCACACCCCCTGCCCTCCCTCTGCACCAGTTCTGGACTCCAGACCTCAGCCCCTGCCCAGAGACTCATCAACAGGAAGTTCAGTAGCCGGAACACTCTGTTCCCTCGACATTCTTGTTTTCATTCTGCAGCTGTGCATTCAATGCTTCTTGAGTTCTCTCTGACCCTGTGGCTGGGGTCTGTCTGTCTGTC	-
fa1_ncrna_9_000099373985_000099374240	chr9	99,373,985	99,374,240	ncrna	Aplodontia rufa	Aplodontia_rufa	GCA_004027875.1	51,342	Aplodontiidae	mammals	1	zoonomia_cactus	AprRuf_scaffold_31133	36,203	36,458	+	45,707	36,330	36,331	1	1	AAATTAATCAAGAAGTAAGAATTTCTGACAAATGCCATCTGCTGATTTTTCAGAGAGACAAGTTTTGGTGGTGTGACCAGCAGGTGCCTCAGCTTTTTCTAGCATGCAGTACCAAAACAGTCACCATGGCAACCCTCAGAGGGCAGCCTTCCAAAGAGATGCACTGTGAGCACGGAGACTCTAGAGCACTTTCAAGCAAAGGCAAGGAAGCTAGCGTTGGGTTCCAATGGGGGCGAGCAGGACCCCAGCTCCTGA	-
fa1_ncrna_11_000006719019_000006719274	chr11	6,719,019	6,719,274	ncrna	Giraffa tippelskirchi	Giraffa_tippelskirchi	GCA_001651235.1	439,328	Giraffidae	mammals	1	zoonomia_cactus	LVKQ01S013365.1	51,362	51,617	+	213,285	51,489	51,490	1	1	ATTACTACCCAAGAAAAATGAGCAGAGCTAACTTCCAACTGATCCACAAGACTTCCGTGTACAACACTCAGCCCTGCTCTGAAAGAGAACTTTCCTTCTATTTCCTAGAGAAGCTGCTGATGCTGGATTGTGGGCTGAGACACCTGATCATCAAACAtgaagaatacacagagaaccaAGTCTATTCAAGCACCTCAAATCAAGAAAAGGAGGCTTTTGATCCATATAAGATCTACCTGAAGAAAGTGACAGTCC	-
fa1_ncrna_12_000115581245_000115581500	chr12	115,581,245	115,581,500	ncrna	Choloepus hoffmanni	Choloepus_hoffmanni	GCA_000164785.2	9,358	Megalonychidae	mammals	1	zoonomia_cactus	KN185605.1	1,036,914	1,037,169	+	1,273,449	1,037,041	1,037,042	1	1	ccaaggtcacacttCCCTACTTCCGCTTCTGAACAAGTGCTCAGGCACTTATTATTACCAAAGGCCTCTGAGTAAAGGCTGTTGGCCACGATGCCCTAGCTGGACAAGGTCTTGGCCAAACATCCATCCCTAAGGGCCCTGGAGAAGGAACTGGTGGGCAGAGATGCCCCAATTCCATCCAGTTGAACTTCCATCCTGCAAGGATTTGAGGCTCAAGGCAAACTCCTGAAGCTGGGGCAAGGACAAAAAGGAACT	+
fa1_ncrna_1_000178939052_000178939307	chr1	178,939,052	178,939,307	ncrna	Loxodonta africana	Loxodonta_africana	GCF_030014295.1	9,785	Elephantidae	mammals	1	zoonomia_cactus	GL010043.1	21,922,399	21,922,654	-	51,904,812	21,922,526	21,922,527	1	1	GACCCCTGGGGTGACAGGACCCTTACCCTTCTACCTCCCCCTCCTCCAGCTTGCCTTCCCCTGCCCTCTCTGAAGCCTGAGCCCCAGCCATGTCCGTGCATAAATCAAGCAGCAGGGTAGCTTGGAAATATGACGAATACCTTGGCTGGCTCCTGCTTGAAAAGACAAGGGGGAGGAGAGGGATTCTAAAGTAACTGGGCCTTGGctagaaatgcagccagaatttAGTGTTCCTGGAGCTGGCCCCAGCTgctc	-
fa1_ncrna_10_000003808167_000003808422	chr10	3,808,167	3,808,422	ncrna	Chinchilla lanigera	Chinchilla_lanigera	GCF_000276665.1	34,839	Chinchillidae	mammals	1	zoonomia_cactus	JH721889.1	1,821,926	1,822,181	-	23,936,731	1,822,053	1,822,054	1	1	tggtgACATCCTCACTGAGTAAACTTGGACAAAGACCGCTGGCCTGACACACCGTGTGAAGCCTGCCCTTTGAGAGCAAGTCAACGCCAAAATAGACAGCAAAGGAAAACTAAATCCAGCTTGAACAATACTGGCCCTAAAATAGCAACAGGGTTTATGACCGCAGCAGCAAGAACGGCTGCTAATCATTTGCCAGgatcttttatttcagtttgtcGCTAGTGAGTGACACAGGGGACTTGAAGCCCCTGTCAG	-
fa1_ncrna_2_000238232204_000238232459	chr2	238,232,204	238,232,459	ncrna	Aplodontia rufa	Aplodontia_rufa	GCA_004027875.1	51,342	Aplodontiidae	mammals	1	zoonomia_cactus	AprRuf_scaffold_40866	21,011	21,266	+	37,083	21,138	21,139	1	1	CCACAAAAGGACTGGGCAACCTGATCATCTGCAAATGTAACAAAGGCAAAAGCCCTGAATGGTTTGGGAATGAAGACATCTACCTCTCTGTATGGACAGGAGAACTGCTGCAGCTCGTCAACAGTCATGTCCTCTGAATAACACCCAACACCTTTCTGCTTCTCAAAGGCTCATTTGGGCTTTGCTTAGAATTGAACAGTTTGCAGTCACACCATCATACATCTATCATATGCCACTGTGACATTACTTTCACCT	-
fa1_ncrna_14_000098139612_000098139867	chr14	98,139,612	98,139,867	ncrna	Kogia breviceps	Kogia_breviceps	GCA_004363705.1	27,615	Physeteridae	mammals	1	zoonomia_cactus	KogBre_flattened_line_30015	36,225	36,480	-	41,477	36,352	36,353	1	1	GCAGCTGAAATTTAATAACTACATCTCTCCTATGGTGTTGGATGAAAGTTTAATACTTTCTGATTTGGCTTCTTTCTTCTGCAAGATGCTTATTCAGAACTGTAGCTTCCCCTTTTCTAGTCGGGAAAATGAGAGGTGCAGTGGATTAATCAAAGCCTCGAGAGGCTGAGCCCAGCCCCAGCCCAGGCCAAACCATGGGGACTTAGAATCTAAGCTAAACCAAACCCAGAGCTGTCCATGATACCTGGAGAAATG	-
fa1_ncrna_5_000082312590_000082312845	chr5	82,312,590	82,312,845	ncrna	Miniopterus schreibersii	Miniopterus_schreibersii	GCA_004026525.1	9,433	Miniopteridae	mammals	1	zoonomia_cactus	MinSch_scaffold_5117	34,383	34,638	-	155,551	34,510	34,511	1	1	TGTTTTATAATCATTTTCAGATTCACCTTTACCAATTACAACGAGTTTTCCATGCAGAACTGGTTTAGTTTGCACCGGGTTGAGATTATTTTTAATAATTCAATCCAAGCCACTTTTAATGCAGCCGGCATATGTGCTCCATCGAGTTATTCCTGCCACTGCCAGCGCGTCAGCAGCCCACAGCAGTGTGATGCCCTCTTGTTGCCCAGCGACATGGAGGATGTGTCAGGCCTGTGGGAGGTCACTTTTGTGGAT	+
fa1_ncrna_4_000188738753_000188739008	chr4	188,738,753	188,739,008	ncrna	Dasypus novemcinctus	Dasypus_novemcinctus	GCF_000208655.1	9,361	Dasypodidae	mammals	1	zoonomia_cactus	JH580647.1	254,641	254,896	+	1,045,206	254,768	254,769	1	1	TCGTTCCGTCAGGAGAAGCAGATGGAAATGTTTACTTCTGGGATATTTGATATGTATCAGCGATATACTGCATTTAAAAGGTGCCACTTTGAGAACTTGGAGTATATTCAAAGTAAAATAGGTGGCCTTAGGCATGCATCTGCCAGCACTGGGGGTTCAGAAGCCTATAAGCACATACAATTTGAAGGAGGTGCGCACAGAGCAGAAAggatgccaaagacagagaagcaAGGCCACATCCGGACGAGCCCCATG	+
fa1_ncrna_16_000021467072_000021467327	chr16	21,467,072	21,467,327	ncrna	Lyroderma lyra	Megaderma_lyra	GCA_004026885.1	3,371,112	Megadermatidae	mammals	1	zoonomia_cactus	MegLyr_scaffold_13149	48,056	48,311	+	90,079	48,183	48,184	1	1	CAAAAAAGAATTCACATACCAATGTGAGTAAATTCAAGACTGAGATGATATAATCTGTACCACAAGTCTGGCAGTTCTCCAGTTGATCTAATCCATATGTAATGACCATGTCACAATGTATAGTCATGCTAGGATCCAAGCTGCCGAGCAAAACACCAACACACTCATTAGCAGCTGTCAACACAGCCTCAGAAAAAAACACCTGGTTTGCGGCCGTCACACATCTCATTACTCTGTACAGAACCTGCAAACGGG	+
fa1_ncrna_17_000053943131_000053943386	chr17	53,943,131	53,943,386	ncrna	Mesoplodon bidens	Mesoplodon_bidens	GCA_004027085.1	48,745	Ziphiidae	mammals	1	zoonomia_cactus	MesBid_scaffold_103043	6,622	6,877	-	11,393	6,749	6,750	1	1	CAGTTTAACCTAATGCCATCAAATTTACTGTCTGTTACACTTGGACCAGGTAGTCTAGCAGGTCTAGAGAAGAGAGTGTCTTTTTCAAGAAAACCCCTTTGCCATACAGAATACAGGAAAGGACAGCTTCACAAAAGTTCCTAGGAGGGAAGGAAAGGCTGAAAATTCcatattgctttgaatatacaatagtcaagtgcatttacgtaacatatctaaatttattatgataaaaccatgaattatgtttgctct	+
fa1_ncrna_12_000122423270_000122423525	chr12	122,423,270	122,423,525	ncrna	Odocoileus virginianus	Odocoileus_virginianus	GCA_002102435.1	9,874	Cervidae	mammals	1	zoonomia_cactus	KZ100405.1	29,007	29,262	+	495,060	29,134	29,135	1	1	TCCAGGGAGAGACCGAAGCCCAACACTTGCTCTATACTTTGAGAAAAGCCGCTTTTATTCGCCCCAGCCGCTTGCAGTGAAGCCCTGGTTAAGGTCCtggtcctcccacctccccccggGGATCTactttaaaagcttttgaaaGGAACTGGAGGAAAGGCATCAGCAGCCTGCTCCGGGCTGGTGCAGCGGAGAGCGGCCAGCATTTCACTCCCATGGTCCATGGCAACCCCAGAAGCTTGGCAGCTCCTGGGA	+
fa1_ncrna_11_000015914133_000015914388	chr11	15,914,133	15,914,388	ncrna	Chrysemys picta bellii	chrPic2	v3.0.3/chrPic2	8,478	Emydidae	reptiles	3	ucsc_multiz100way	chrUn_KK088238v1	562,737	562,992	-	7,392,870	562,864	562,865	1	1	ATTCTTTGAATATTTCACACATTTAAACTGCAACGTATGAAAGTGACCACTGTGCACCTCACTATGTCAGTGTAAAGTATTAAAGAATAAATAAACGTCACAACTCAGTAACTTGTGTGACTTAATTATGTCTCAACATTTACATAGGCTCTTTAATTAAAGGAGTAAAGGTTAACAGGTTAAATAAgtaatttaatcagaaaattatGCAGAAGTGCCACAAATCACATTATACAGCTCTTGAGGTCAATATGG	-
fa1_ncrna_15_000070572601_000070572856	chr15	70,572,601	70,572,856	ncrna	Catagonus wagneri	Catagonus_wagneri	GCA_004024745.1	51,154	Tayassuidae	mammals	1	zoonomia_cactus	CatWag_scaffold_1047	132,040	132,295	-	292,148	132,167	132,168	1	1	CCTAAGATGCGAGCGGAGCTTGAGATAGTTGAGTCTGGCTGGGCTGTGCAGGATGGATCGAAGGCGGAGAGACCAGAGGCAGGGAACTCTGCCAAGAGGTTCTGGAGGCAACTTGGCGTGCAAAGGGGATGAGAGCCAGGCCTTGGGGATTAGCAGTGGGAATGAGAAAAGGGGCGGGTACAAAAGAAATTTCAAAGGGAAAATTGATGGAGCTTAGTGAAAGACTGAATACAGCAGACGAAGGAAAAATTCCTT	+
fa1_ncrna_6_000105588618_000105588873	chr6	105,588,618	105,588,873	ncrna	Daubentonia madagascariensis	Daubentonia_madagascariensis	GCA_004027145.1	31,869	Daubentoniidae	mammals	1	zoonomia_cactus	ctg30	56,052,010	56,052,265	-	58,889,417	56,052,137	56,052,138	1	1	TAATCTGTTCAATCAAGTTCATCCTTGTGCTATTATACAAACCAAGGGGCTTTATTGTATCTTCTGTCTATTTCCTGCTAGTTGTGTCTATTTACCAATACATTCTGCTTCACATAAACATAACATTTTTGCTTCATTTATGACCTTTGATTTGAAACTTTCTATCCACTGGATAGGATGGAGAAATAATTGGGTGATTCTTGGGCCCATCTTACAAAAATTCACAGATGCTGCTTTGAATAGAACCATTCATAA	-
fa1_ncrna_3_000125712418_000125712673	chr3	125,712,418	125,712,673	ncrna	Taeniopygia guttata	taeGut2	taeGut324/taeGut2	59,729	Estrildidae	birds	2	ucsc_multiz100way	chrUn_EQ839933	31,637	31,892	-	53,603	31,764	31,765	1	1	TGCTCAGGTTTTTCTGGTTTTCTTCTTTCTTGGATCAAAGTATTTCCTCCTGACCATCATGTGCTACGACCGCTACGTGTCCATCTGCAAACCCCTGCACTACGGGACCCTCCTGGGCAGCAGAGCTTGTGCCCAAATGGCAGCAGCTGCCTGGGCCAGTGCCTTTCTCTATTCGCTGCTGCTCACAGCCAATACATTTTCCCTGCCCCTGTGCCATGGCAATAGCCTGGGCCAGTTCTTCTGTGAAATCCCCCA	+
fa1_ncrna_16_000076136075_000076136330	chr16	76,136,075	76,136,330	ncrna	Tolypeutes matacus	Tolypeutes_matacus	GCA_004025125.1	183,749	Chlamyphoridae	mammals	1	zoonomia_cactus	TolMat_scaffold_10013	38,646	38,901	+	47,912	38,773	38,774	1	1	ACACAATGACAGAAACTTAGGGATGAAAGATATATATATGTGAATGAAGTAATTGCCAATTTGGCAACTATAATTTCCCGCTTGGTTTAAATGAGATTTCCATACTTGGTCAGCATGTGAACCAGTTTCCCTGTGGCGTGCACTGCCAGGCTCCATCTGCCCCGCAGAGCCGCACGCTGTTGCCCGCATTCTTTTTCATGCCTCTCGTCCTCCTAAAGCCAAGCATTTTCATCTTTAAATTCAGTTGTTCTGTGG	+
fa1_ncrna_22_000020591935_000020592190	chr22	20,591,935	20,592,190	ncrna	Bos taurus	Bos_taurus	GCF_000003205.7	9,913	Bovidae	mammals	1	zoonomia_cactus	CM000193.6	74,626,134	74,626,389	-	75,367,154	74,626,261	74,626,262	1	1	GGGCTCGCCGCCCGCCTCACCCTTGTTCTCCCGCTTCAGGTGCTCGATCTCCTCGTGGAGCTTGACCAGCGTCTCCgagtgctgctgctgcaggaACTGCACGCTCTTCTCCAAGTCCAGCACCCGCTTCTGAGCCTCGTTGAGCCCGAGCGACGCGCCGTGCTGCCCGGGCTGGGGGACCGCCGGCAGGCGCTGGCGCAGGCGCGACGTGCCCCGGGAGCTCAGGATCCCCGAgctgcggggccgctgcccggc	+
fa1_ncrna_1_000155232990_000155233245	chr1	155,232,990	155,233,245	ncrna	Enhydra lutris	Enhydra_lutris	GCF_002288905.1	34,882	Mustelidae	mammals	1	zoonomia_cactus	KZ291841.1	1,307,871	1,308,126	+	5,742,917	1,307,998	1,307,999	1	1	ACCATCGTCTTTGGGGCTCCTGGCCGGCAGCAGCCCCCCGCCCCAGACGtacctccttctccagctcttccTCGTTCTCGGGCCGGTGCTCCCCGCACAGCAGCTGCAGCCGCTCCACGAACTGCCGCTGCATGCGGCCGGGAAGGAAGAAGTTCAGGGGAAAGGGCGTGGCCTCCGCGTACCACTTCCGGGTCACCTCCACGTAGTTCTTGGTGTCCACCCAGAAAGTGTGTATCTGGATTGGGGAGGCAGAAG	-
fa1_ncrna_1_000244065338_000244065593	chr1	244,065,338	244,065,593	ncrna	Lyroderma lyra	Megaderma_lyra	GCA_004026885.1	3,371,112	Megadermatidae	mammals	1	zoonomia_cactus	MegLyr_scaffold_15491	16,719	16,974	+	74,274	16,846	16,847	1	1	AAAGGTTTCGAGAGGATTTGGTTTAACCGTTTCTGCGAGTGTTCCTAACGAGCTCGTGATGGTTTACAACAAAGGCCAGGTCGTGGGCTCCGGGCGTCTTCTGACCTGGGCTCTCCCCGCTGACCCGAGGCCTGGGCACTTGGGCTCCCGCCCTGGCTCACCTATGGGAGTCGGAGTGGTGAGGCCACCTCCGGGCCTGTCTTCATGCCAGGGATGAATCATGCAGGAGGCAGAGCGGAAGGAGTCTCTTTGTTG	+
fa1_ncrna_3_000181741468_000181741723	chr3	181,741,468	181,741,723	ncrna	Balaenoptera acutorostrata	Balaenoptera_acutorostrata	GCF_000493695.1	9,767	Balaenopteridae	mammals	1	zoonomia_cactus	KI538461.1	12,187,671	12,187,926	-	14,474,954	12,187,798	12,187,799	1	1	ctaattttttttttcctcctttcagtAAGAAGGATAAGCTTTTAGAGTACCCAGTCACCGTGGTAACTGCCAAAAAAATTCTCCTGAAGTTTGAAGAGGTCAGCTAGCAGGGTCAACAACTCTGGCCTCTCTCTGAGCTCGGTCTAGCATGCCCCAGCCTGCAGTTGAGGTGTCAGGCCAGATCTGACCCTGGGAGGTGGACTATTCCGGCTCTGATATAAATTTTTTGAGTCAGTTCATGGCCTGGACTCTCCA	+
fa1_ncrna_3_000107845721_000107845976	chr3	107,845,721	107,845,976	ncrna	Pelodiscus sinensis	pelSin1	PelSin_1.0/pelSin1	13,735	Trionychidae	reptiles	3	ucsc_multiz100way	JH207122	3,012,601	3,012,856	+	9,168,737	3,012,728	3,012,729	1	1	AAGAAGCTGTCTTCTGAGCACCAGCAGGATGCATTTGGAAAAGACTGAGGGAAAGCTGGACTCCAGTCACATTTGAGCCCTGTTAATGGATAATTAACCAGCATACCACTTGGCTTCAAAACATAGAATATACTTTATTGCCTGCTAGTTAATTAAAGTGAGGCGTAAACACCAGCGCTGAAATAAGCATAAAGGATCCAGAAGAAGGAAAGAATATTCAGTCACCAAACAAGGCATCAGGCAATAAACTGTACA	-
fa1_ncrna_6_000029993408_000029993663	chr6	29,993,408	29,993,663	ncrna	Balaenoptera acutorostrata	Balaenoptera_acutorostrata	GCF_000493695.1	9,767	Balaenopteridae	mammals	1	zoonomia_cactus	KI538416.1	8,821,816	8,822,071	+	9,519,994	8,821,943	8,821,944	1	1	CTAAGGAACAAGGAGAACCTAAAGGACTGGGGGAGCCAGTTTCATGAGATCATTACTCACTGTAGGAGGAGATGTCTATCTCATCAGGCAGCTCACTAATATTGACCTCAAAGCGATCCTGCACATCATTGAGAATCTTGGCATCATTCTCATCTGACACAAACGTGATGGCCAAGCCCTTGGTGCCAAACCGACCTGCTCTGGCCACCTGGAAGAAGACAGATGATAGAACTGGTAGACCCCAAAGAAGGAAGA	-
fa1_ncrna_8_000125952049_000125952304	chr8	125,952,049	125,952,304	ncrna	Ceratotherium simum	Ceratotherium_simum	GCF_000283155.1	9,807	Rhinocerotidae	mammals	1	zoonomia_cactus	JH767751.1	12,561,244	12,561,499	-	26,636,480	12,561,371	12,561,372	1	1	CTGTTTTATTTGTTCAGAAGCACTTGCTCTCTCAAACTTCTTGCACTTTTCTTTGAATAAAGGGAGATGGGCCAGTCGTGGTGTCGGGATCCATTGAAGGGTTGACTAAAGGCGAGCACGGATTCCATGTCCATGAGTTTGGAGATAATACACAAGGTGGGTGTTGGGCTGCTCTAGTGACCCATACTGGTTTAACCTAGTAAGATAAATGGGACTGAGTACAGTTAGccctaaacattaaaaaaaaagaaaagt	-
fa1_ncrna_3_000120497313_000120497568	chr3	120,497,313	120,497,568	ncrna	Capromys pilorides	Capromys_pilorides	GCA_004027915.1	34,842	Capromyidae	mammals	1	zoonomia_cactus	CapPil_scaffold_350773	1,796	2,051	+	3,466	1,923	1,924	1	1	ATCACAGCAGCAGAAAATGAAGTCATTTTGGACCACAGCCTAAGAACACAATGACTTCAGAACACAAAATCTCTGGTTAGGGAGGAGTTCCTAACAGCCACCCTTTACAAAAAGTGGAATTTAAACTCTTGTGAATAACTGTGAAACTCTCAGACTCAAGTAGGAATGGGGTAGTTGGCAGGGAAAGGGTAGAACTTTTCCTAGTTATCTGCTTCACTTCATTATTTTTCCTTTGTTTATAGAATAATATTTAAA	-
fa1_ncrna_7_000129780782_000129781037	chr7	129,780,782	129,781,037	ncrna	Otolemur garnettii	Otolemur_garnettii	GCF_000181295.1	30,611	Galagidae	mammals	1	zoonomia_cactus	GL873812.1	726,676	726,931	-	932,885	726,803	726,804	1	1	TCTACCCACTTTCGCCCGGCTCTGTGGCCTCACAGGTGTCTAGCCACTGCCGCCGCCAGGAACAAAGGCTGTCTGTCtcggaagagggagggaggggagccgCCCCCAGACCCATTCCCATCCTCCTTCTTTCGCCCCACTGCGGCTGTGGCTTCCCTTGGGAGGGGGCGCGAATGTGGATAGATTCTTCTCATGCGTCTTTTGCTCGGATACCATGCGGAGCGTTCAGAAGGGGTGGAGGGGACAGGGGCTAGT	+
fa1_ncrna_12_000097462643_000097462898	chr12	97,462,643	97,462,898	ncrna	Hippopotamus amphibius	Hippopotamus_amphibius	GCA_004027065.1	9,833	Hippopotamidae	mammals	1	zoonomia_cactus	HipAmp_scaffold_5392	18,484	18,739	+	165,517	18,611	18,612	1	1	GTGGAACTGTCATTGGGGATTCTCACCAAGAAAGCGCAGACAGAGGCAGACCTTCTCCAGAGTGTCAGCGCTGCCCAGCAGTCCGTGCAGAATACAGGTACCTATTGTTCCAGAGACAGATATGTAGCCAGCCAGTCAGACTCTGACAGATCTCAGCAAACCAGTGAGCCTGCCTTCATTTTAACTCCTTATTTACTAGTGCTTTTTGGTCAAATGCAAAGGTCTTCCCAACACCCACGAGAAATAAATGAAGAT	-
fa1_ncrna_2_000207120812_000207121067	chr2	207,120,812	207,121,067	ncrna	Galeopterus variegatus	Galeopterus_variegatus	GCA_004027255.1	482,537	Cynocephalidae	mammals	1	zoonomia_cactus	GalVar_scaffold_12333	26,776	27,031	-	83,783	26,903	26,904	1	1	GCAGAGACAAGCATGGGGAAAGAAAAAGTAGATGCTATAAGCAAGAGAAACAGACAAGAGGGGAGGTAGCGGGCTAGGGATAGAGGACGGGGAGAGGGAATATGAGTTAATTTGGATTAAATGGATGAGAATCAGAAGTATTTATTTGGAATTGGTGTGAATGGGGCACATGGGGAACTGAAAACAAAGGTGATAATTTATGTGGCGTGGATGAACTAAGAATAATGAAAAAAGCATGAAGGATGGAATCAAATT	-
fa1_ncrna_14_000026873449_000026873704	chr14	26,873,449	26,873,704	ncrna	Ursus maritimus	Ursus_maritimus	GCF_000687225.1	29,073	Ursidae	mammals	1	zoonomia_cactus	AVOR01112848.1	24	279	+	1,221	151	152	1	1	gatattctgCTCTTATGGTATGCTCAGACgttcaaataaaaagaatctaATGTGATTAGGAGAGACAGAAAGGCATATATATTTCTAGTCTCTTTAGCTTGcagtaaatatttggaaaatccaTCAAAAGAGCAAAATTATATCTCGACTGACAAGCCTTACCCAGTTCACACCCCAGGCAATGCTCTTATGtcactgagaaacaaactggtcCACCCAGAAGAGAGCCTCACTAATCTTGATGCCTAAAAGCTG	-

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`marin-dna/functional-ncrna`

Human-anchored 255 bp vertebrate sequences from the Zoonomia 447-mammal Cactus alignment and official version-matched UCSC hg38-to-target liftOver chains. This draft covers the ncrna region cohort with all species scope and preserves source FASTA/2bit letter case.

Non-human rows project only the central human nucleotide and extract the 255 bp target window centered on its unique mapped locus.

For the 28 non-mammalian targets, the stable ucsc_multiz100way alignment_source value identifies the pinned UCSC assembly cohort; the actual projection operation uses the matching checksum-pinned pairwise liftOver chain.

Anchor eligibility uses the pipeline's pinned phyloP conservation filter. Sequence case is independent of that filter: lowercase bases preserve source repeat masking, uppercase bases preserve source non-repeat-masked sequence, and conservation scores never rewrite emitted characters or case.

Produced by the commit-pinned vertebrate projection pipeline.

Human anchor provenance

Human anchors were constructed on GRCh38 from the complete Ensembl release 115 GTF with all qualifying transcripts; RefSeq and canonical-transcript-only filtering were not used. The enhancer input is ENCODE SCREEN Registry V4 dELS/pELS. The five disjoint classes use the base-priority order cds > utr3 > tss_region > ncrna > enhancer followed by the source-arm window-majority gate. The shared projection catalog requires at least 10% human bases above the pinned phyloP cutoff; this initial training dataset contains only the nested at-least-20% catalog. Projected 10–20% rows are excluded and retained as a separate producer artifact.

Coordinates and sequence semantics

Human source coordinates use GRCh38/hg38 primary chromosomes. All human and target coordinates are 0-based and half-open. Every emitted sequence is exactly 255 bases, preserves its source FASTA/2bit letter case, and is oriented to the human anchor.

The published format is zstd-compressed JSON Lines under data/train/ and data/validation/. The release is validated before upload against a producer-keyed manifest of file sizes and SHA-256 checksums, and the immutable Hub revision exposes each large-file SHA-256 identifier.

license: other preserves the source-specific terms of the public genome assemblies, annotations, and alignments rather than relicensing those inputs.

Splits

train: 6,209,692 rows after removing the validation sample and applying the configured reverse-complement augmentation.
validation: 16,384 original-orientation rows sampled uniformly without replacement with seed 517 before augmentation (4,194,304 tokens including BOS).

The split is row-level and does not stratify by chromosome, species, or human anchor. Different species projections from one human anchor may occur on opposite sides of the split. The reverse complement of a selected validation row is excluded from training.

The selected target manifest contains 135 family-deduplicated projection targets; human reference rows are added separately once per anchor.

Projection backend	Clade	Selected species
ucsc_multiz100way	amphibians	1
ucsc_multiz100way	birds	11
ucsc_multiz100way	jawless_vertebrates	1
ucsc_multiz100way	lobe-finned_fish	1
ucsc_multiz100way	ray-finned_fish	9
ucsc_multiz100way	reptiles	5
zoonomia_cactus	mammals	107

Schema

query_name: String
source_chrom: String
source_start: Int64
source_end: Int64
region_label: String
species: String
alignment_name: String
assembly: String
taxonomy_id: Int64
family: String
clade: String
phylogenetic_rank: Int64
alignment_source: String
t_chrom: String
t_start: Int64
t_end: Int64
t_strand: String
t_src_size: Int64
pre_resize_t_start: Int64
pre_resize_t_end: Int64
fragment_count: Int64
aligned_bases: Int64
sequence: String
augmentation: String

Intended use and limitations

This dataset is intended for genomic language-model research and is not a clinical resource. Assembly quality, alignment gaps, repeat masking, family-deduplicated species selection, human conservation selection, and the center-nucleotide acceptance contract affect the observed sequence distribution. Projecting the center nucleotide does not establish that both 127 bp target flanks are homologous to the full human anchor.

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