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query_name
string
source_chrom
string
source_start
int64
source_end
int64
region_label
string
species
string
alignment_name
string
assembly
string
taxonomy_id
int64
family
string
clade
string
phylogenetic_rank
int64
alignment_source
string
t_chrom
string
t_start
int64
t_end
int64
t_strand
string
t_src_size
int64
pre_resize_t_start
int64
pre_resize_t_end
int64
fragment_count
int64
aligned_bases
int64
sequence
string
augmentation
string
fa1_tss_region_12_000016605813_000016606068
chr12
16,605,813
16,606,068
tss_region
Falco cherrug
falChe1
F_cherrug_v1.0/falChe1
345,164
Falconidae
birds
2
ucsc_multiz100way
KB398038
996,593
996,848
-
6,816,256
996,720
996,721
1
1
CTGCCTCCCCTGTATCGCTTAATTGAGAAGGTAAGTGAGGCAACTGTGTACATAAGCTTTGGGTcatctgtgtatgtgtgtctgcatcactctctctccctctccctccctctctctgaGTCATAAGCCGGGGCTgcaatacacacacacacacacacatctctgCACTGCAACTTTCactcaggctgcagctctgctgagactgttttgtttaaatcatGTGaggcttcattatttttatgatgagACATGAAA
-
fa1_tss_region_22_000040346635_000040346890
chr22
40,346,635
40,346,890
tss_region
Mungos mungo
Mungos_mungo
GCA_004023785.1
210,652
Herpestidae
mammals
1
zoonomia_cactus
MunMun_flattened_line_534
565,378
565,633
+
686,731
565,505
565,506
1
1
GACTCCCGGGCTTCCTGCCCTGCCCTTCCTGGTGCCACAGCGCCTCAGAAAAGGGACACCGGCCGAAAACAGCGGGGCAGCTGCTCCCGGGGGCCGAGCCCAGGCGCTGCGCCGAGCCCCGCACGTGCTGGGCCGGGCCCGCTTCTCCCCGCCCGGCCCCCCATCCCGGTGGCCCGTTACCTGCTCAGCCTCCGCCAGCCACAGCCAGAGCTGCCGCCAGGTCCGGAATTTGTACCTGTCGCTAAACACGAAGCA
-
fa1_tss_region_4_000144646411_000144646666
chr4
144,646,411
144,646,666
tss_region
Mungos mungo
Mungos_mungo
GCA_004023785.1
210,652
Herpestidae
mammals
1
zoonomia_cactus
MunMun_flattened_line_2834
344,503
344,758
-
363,504
344,630
344,631
1
1
CCTGGCACAACTGCAAACGGTGTCATCTGCACAACTTTATCTCGGTCCTCGGACTTCCCTAAGGCATTGGGCCCGTCGCCTTGTCTTCTATTTTTTTGCAAAGTTGCATCGCTCTTCATCTTTCCGCCCCCGGCACCACTCTCTGCCTCTCGAGGGTCCCCCGCAGCCTCCTCCTGGCGCTGCGCCCTAGTGCCCCTGGTGGGCAGTGGCGTTCCCCCCCGTCCTCCCGCGCCGAGCCCCTGCTGCTCGGGGCAG
+
fa1_tss_region_14_000020355639_000020355894
chr14
20,355,639
20,355,894
tss_region
Cuniculus paca
Cuniculus_paca
GCA_004365215.1
108,852
Cuniculidae
mammals
1
zoonomia_cactus
CunPac_flattened_line_38073
11,182
11,437
+
18,575
11,309
11,310
1
1
gtatgtgcACGTAATTCGACTAAAATGACCTATTGTTAGTATGCTGTTTGTAGTCATGCACCTTTTAGCCACAAATTTTAGCCATAATTATGTGTTATATCCCTGTCCTTAGACTCCGTACCCCTCCATTAATCCGGACTGAGAAAGAATTGTCAGACAAAGTACAACTGCTAGAGGTGAGTTAAAAATGGAGTAGGAAATAGTACATCTCTTGTCCCAGGTTTCCTGACATTGATTTCACATTTTCTCAGGCTT
+
fa1_tss_region_21_000037073227_000037073482
chr21
37,073,227
37,073,482
tss_region
Anoura caudifer
Anoura_caudifer
GCA_004027475.1
27,642
Phyllostomidae
mammals
1
zoonomia_cactus
AnoCau_scaffold_1528
240,527
240,782
+
400,147
240,654
240,655
1
1
CACACTCACCACACGCCCACGGAGGGGGTGTGGAGGTCCCCTCTCCCCGATCATCTTGGATGAAGTGCGACAAGGTGACACATCCAGGAGCCCTGCCGCGCACCAGGTGCGCACTCACCCGGGCCCGCAGCCCGTGAGCCTCGGACCCGAGCGGCCGCAGCCGCCGCCAGAGGTCCTCCACCTCAGCCCGAGCTGGCGGGAGCGAGCGGCTACGCGGGAGGCGGAGCGTCACGTGTGCCGCAGCGCACTTGCGTG
-
fa1_tss_region_19_000045245279_000045245534
chr19
45,245,279
45,245,534
tss_region
Lemur catta
Lemur_catta
GCA_004024665.1
9,447
Lemuridae
mammals
1
zoonomia_cactus
scaffold_20
26,403,748
26,404,003
-
36,499,571
26,403,875
26,403,876
1
1
CCTCTTCCCCAGAGGGACTCTCGGGGGTGTGAATCCTTCCCCAGCCCCCAGCACACTCACCTCTGTCCTTCGTGCCTGTCCCTGTGGCCCTGCTGCTGTCCTGTCTCCAGGCTACTTCTGCCAGGACTGCTGAGCGCTTGGATCTGAAGGTGGGGGGGCTCGGAGGAGGACAATTTCCTGTCAGGAAACCCCTCCCTCTCGGGGGCCAGGGGCGGGAAGGCCTCATTATCTGTCTGCCCTTTCAGGCCAGGCTGC
+
fa1_tss_region_5_000140537107_000140537362
chr5
140,537,107
140,537,362
tss_region
Ateles geoffroyi
Ateles_geoffroyi_a
GCA_004024785.1
9,509
Atelidae
mammals
1
zoonomia_cactus
k141_937984
2,896
3,151
+
4,623
3,023
3,024
1
1
AGAAACAGATGGAATAGGAGAGTCACCTGGTGGCAAAATATTTCTCTATTGTTTTATTACATATAAAAACTATTAAGAGTATGAGAAACCTTGTTGGAAAGACCTATTCCACACGTAGGTTCTGTAAAGAAAATTTTCATTTTAAAAGAACATTTAAATAAAATATAATTTCTATAAACATTATTCTATGTTACTTCTGCCTATAGTAAGTATAAACAGTAGTCTAAAAAATGTTTTCTCAATTGAACTAAACAA
-
fa1_tss_region_11_000000695559_000000695814
chr11
695,559
695,814
tss_region
Ctenomys sociabilis
Ctenomys_sociabilis
GCA_004027165.1
43,321
Ctenomyidae
mammals
1
zoonomia_cactus
CteSoc_scaffold_26098
39,475
39,730
+
56,005
39,602
39,603
1
1
GGAGGCCCGAGGCCGAGCCGAGCTCCGCCGAACGTCCCCGAGCCCGAACCCGAACACTCCCGAGATTGAGCTCCCGCCTCCTCCTGTACGAAAGAGCCCGAGCGCTGCCGGACGGCGAATCGACTCGGCTGCTGTCGGACACTACTCCCGGGTACGCAAGAGGAGCAAAGATGGCGGTAGGGCGCGGCCTAAAGGCTGCCGGGATCGTGGCGGACCCAGGGCCAAGATGGTGGCCGCGCGGCCAGGTGAGCGGGC
+
fa1_tss_region_6_000056542761_000056543016
chr6
56,542,761
56,543,016
tss_region
Kogia breviceps
Kogia_breviceps
GCA_004363705.1
27,615
Physeteridae
mammals
1
zoonomia_cactus
KogBre_flattened_line_25791
6,494
6,749
-
45,271
6,621
6,622
1
1
GGGTCTGGTTCGCGCTGATGTCACCACCAGGCGGTTGCCTCGCAGCCGCCCGCCTCTGGGCACCTCCCCCTCAAAGGCTCGAGGGCTCCCGGCCGGACGGGGCCAGAGTCCGGGGGATATGCCCACGGAGTCCGGTCTCGGGAGCGCGTAGCGGCGGAGTGGGAGCCCGGGCCCCGCGGCGGCGAGGGGCGCGCGGCAGATGCGCCCCCGGGAGCGCCCGGGCTCGGGACGCCCGCCCGCCGCCTCCAGCTGCGC
-
fa1_tss_region_3_000062372996_000062373251
chr3
62,372,996
62,373,251
tss_region
Ceratotherium simum
Ceratotherium_simum
GCF_000283155.1
9,807
Rhinocerotidae
mammals
1
zoonomia_cactus
JH767725.1
58,887,568
58,887,823
+
68,426,573
58,887,695
58,887,696
1
1
TTTGCATTCAAATGAACAGGGGCAGAACAAAGTGCACCCAAGGGTACCAAATTACCGCCCATTAACCCAGCACGCAAAGGAAcccaccagcccctgccctgggacctcgaaagagggaaaagggggagggtttacaaaggaaaagaggagagcgagaaaaagaaagaaagaaaagagcctcAAATTAACCCCCCTGAGCCGTTTCCGGGAACCCGGCCTCCGCCACGCGTGCTGGGAGCTGGACAGTGAAGGGGC
+
fa1_tss_region_17_000050707654_000050707909
chr17
50,707,654
50,707,909
tss_region
Loxodonta africana
Loxodonta_africana
GCF_030014295.1
9,785
Elephantidae
mammals
1
zoonomia_cactus
GL010058.1
17,798,910
17,799,165
-
29,745,944
17,799,037
17,799,038
1
1
TGTTCATCTTCCCTACGGCCTCAGGCCCCGGCACGGGCCCGCTCGCCCCGCCCGGGACCTGTCAGCGCCGCCCCCGCCGCGGCCGGCTCCCAGCCATGGGGAGGGACTGCGGAGCTCccccgccctgctcgccccgccgcccgcgcccgtcccgGGACTTCTGCTTCCTCCCGCGAGCCGCCCGCGGCTCCCCTGCTGCTCCCGGCCCGCAGGCCTAGGCCTCCTTCCAGGCCGCGCCTCCCGAAGGCCGGCTCC
+
fa1_tss_region_11_000046381450_000046381705
chr11
46,381,450
46,381,705
tss_region
Chrysemys picta bellii
chrPic2
v3.0.3/chrPic2
8,478
Emydidae
reptiles
3
ucsc_multiz100way
chr4
27,460,809
27,461,064
+
49,328,617
27,460,936
27,460,937
1
1
ACAGGGGCAGTTTCTTCTTTCCCCAACCCCAGGCGGCCCCGGGGCAGGATTTGCCGCTGGAGCGCTGCTGGGCTCCTGCATTTGTTGCCGGGCCTGGTTCTCcgcgcagggggcggggcctgcgaAGTTTGGGCTAGAACTACCTTTTGTTGTCAGCTGGGAGCGACGTCAGGGGCCGCTGTGCTCCGCGAGGTGGTGTCCACATGTGACCAGCTGAAACTAGTTCTGAAGACACAAAGGGAAGGAGCTCAGGAG
+
fa1_tss_region_X_000067544276_000067544531
chrX
67,544,276
67,544,531
tss_region
Galeopterus variegatus
Galeopterus_variegatus
GCA_004027255.1
482,537
Cynocephalidae
mammals
1
zoonomia_cactus
GalVar_scaffold_44482
20,944
21,199
+
33,363
21,071
21,072
1
1
AAAAGCTGCTAGAGACTCTTGAGGAAGCGAGGAAAGTGCCGGGTAGGACTGACGGCTGCCTTTGTCCTCCTCCCCTCCACCCCGCCCCTCCCCCCCACCCGGCCCGTCTCCTGTCCTGCAGCTGCCTCCGTCTGCTACCTCTCTGCCAGCCTCCCCACAACCCTTTCACCACCACCACCCCGCCCCACGTCGGCCCAGCGCTGCCAGCCCAAGTTTGCAAAGAGGTGACTCCCTTTGGCTGTGAGCGGGCGAGCT
+
fa1_tss_region_14_000075049783_000075050038
chr14
75,049,783
75,050,038
tss_region
Enhydra lutris
Enhydra_lutris
GCF_002288905.1
34,882
Mustelidae
mammals
1
zoonomia_cactus
KZ291767.1
18,992,176
18,992,431
-
33,646,359
18,992,303
18,992,304
1
1
CATCTGTTTTTGCTGAAGTGATTAGAATTTTGAGCACTGTCTTGTGGGTCAACTTCAGTTGTGATTATGATTTCACTTTAGGGCATGTGGGATTTAGAAAGGAGCAGTGAAAATTATGAAATTGTGAATGCTCCTTTGGATATTAAATCCGTTGCACCAAACATGAGCTGTGTGATCTGCCTAGAGATCAAAgctataatttgttttgttttggtttttgcacTGTGGTTTAGTAAGAGTTTTAATTTACCTCAA
-
fa1_tss_region_12_000048157377_000048157632
chr12
48,157,377
48,157,632
tss_region
Zalophus californianus
Zalophus_californianus
GCA_004024565.1
9,704
Otariidae
mammals
1
zoonomia_cactus
ZalCal_flattened_line_17072
38,487
38,742
+
89,989
38,614
38,615
1
1
ATGGAGAAAGAGCTACTGGGCGTAGTGCCACGGGTTAAGGAACCTGGCTGCAGGCATTCCCGCAGCGAGGTACGCACTCACCAAACCGCGGGGCTGAGCTGGGTGGTGAAAGCCGCTGTCAAGGTGTGACCCGGAAACAGAAGTTGTTGTATCCAGCGGGCCCCTCTGTTTACAGGATGTGAAGGGTGACTGGGATGGGTGCCTGCGCACCGGCCAATGGCTGCAGGCGGGGTGCGCCTGCGCAGACTCGTGAGG
+
fa1_tss_region_3_000189789822_000189790077
chr3
189,789,822
189,790,077
tss_region
Octodon degus
Octodon_degus
GCF_000260255.1
10,160
Octodontidae
mammals
1
zoonomia_cactus
JH651643.1
4,800,828
4,801,083
+
8,218,351
4,800,955
4,800,956
1
1
CCAgaaatttcccttttcctttcctcctacaGTTTCACttcctacttaaaaataaaaagaaagagaaaagaaagttttagcACCACAGAAACATTAAGCAAGAAAAGAACATTCCTATGTACAACTTGGAAAAATATTACATTGGGTGACCAAGAACCACaaatatgcaaattttatttaaaaaaaaactaaaactgaaaatgCATCTCTAAATGGAATGCTAAAATCCAAAATCCTTACCTCACTAaattgagt
-
fa1_tss_region_4_000159282247_000159282502
chr4
159,282,247
159,282,502
tss_region
Mungos mungo
Mungos_mungo
GCA_004023785.1
210,652
Herpestidae
mammals
1
zoonomia_cactus
MunMun_flattened_line_562
540,157
540,412
-
678,278
540,284
540,285
1
1
acacacacacacacacacacacacacactcacacacacaCGAAATGACTACAAAGACAGGTCTTACTAAGCAGCTCTACTTGCACAAAATCACTTAATAAGTGAGGGAAATTTTTAGAGTACTTAGGGAAAATTTAACGGGGATTTTTCATAGCAACTATGATCTTTTATGAGCTATTTTGAAAACCAATACCAATCTGTTAAAAGTAGGCAATGAAGGATCTTAAAGCAAATCATAATTGACCTAAGATGTCCA
-
fa1_tss_region_12_000050200884_000050201139
chr12
50,200,884
50,201,139
tss_region
Carlito syrichta
Carlito_syrichta
GCF_000164805.1
1,868,482
Tarsiidae
mammals
1
zoonomia_cactus
NW_007249780.1
661,501
661,756
+
788,473
661,628
661,629
1
1
atGTGTCTGTGTTCTAATGAGCATCCTGGTTTTAGACTAGCCTACAAATATTTAACTCTGAGGTATGTGTCCACAAAGCTGCTTTTGTTCCTTCACTAGTCAATGGGTTTTGCTTGTGAGAGTTAGAGGGCTGATTGGATCTGAGGCctcttagaataatttttttttaacattctaagTTTATTTAATGGATGTGCtatgaagagaaaggaatggtgatacttttttttcaaaaaattcatagactatttttat
-
fa1_tss_region_11_000123525763_000123526018
chr11
123,525,763
123,526,018
tss_region
Choloepus hoffmanni
Choloepus_hoffmanni
GCA_000164785.2
9,358
Megalonychidae
mammals
1
zoonomia_cactus
KN183842.1
31,510
31,765
+
245,197
31,637
31,638
1
1
agggagaaagcgcaagccagaagagaagagctgctgctgccgctgctgctTCCTCTTCTTCCCCCTCTACCAGCTGAGAGCTGGGCTCAGAGACGACGGGCAGCTCCGGGAAACCCAGCCCAGGGCTGGAGCTCCCTGCCCGagctgctgctgccactgccaGTTTCTGATGAGGATGGGTAATGCTGGCAGGACTGCAAAACAAGCTCTGGAGTTGCTGTCAGCAGGCCGGCTGGCCGGCCAGCCACCCACCCT
-
fa1_tss_region_1_000101846653_000101846908
chr1
101,846,653
101,846,908
tss_region
Ochotona princeps
Ochotona_princeps
GCF_000292845.1
9,978
Ochotonidae
mammals
1
zoonomia_cactus
JH802072.1
18,384,267
18,384,522
-
43,805,204
18,384,394
18,384,395
1
1
CAAATCCTCCCATCCTTGGTAGGACTGAACTCCACGAGACTGTCAACGCCAGATACACTAGTAAGTCACTCCGGTGGGTTTgaccattttgaaaaataagtgcATTAAATCAGTGggctttattttataaaatcgAAGTGCTGGGATTGTGTTTCTTTATTTACAGGTTGTCATCAAAGATATAATGATAATGTGGTTACTTTAACACTGTAAGGTTACATTAAGAGTAATTTTATAAAGGAATCATTTAAGAGA
-
fa1_tss_region_1_000024112007_000024112262
chr1
24,112,007
24,112,262
tss_region
Vicugna pacos
Vicugna_pacos
GCA_000767525.1
30,538
Camelidae
mammals
1
zoonomia_cactus
KN270912.1
7,304,139
7,304,394
-
23,451,829
7,304,266
7,304,267
1
1
CTCAGCTATGCTGGACCCAGGGaccggcccctcccctcctccacccccctccccatagTTCTCATCCATTGTCATCACACTGTCTCAGCGCTGCTATATTTAAGGCCCGTGCAGGCTCCAAGATCACATTCTTCTCCCAGTCTCCGCTGAGCCCAGGGCAAGAAGAAAACTAGGACCCTCTTATCCGCCGGAATCTTCTCCCCAGAGACACCTCAGTGGGCACGGCTGCTTCTGTGAGTCACCTCCAGGGatcag
-
fa1_tss_region_8_000124372157_000124372412
chr8
124,372,157
124,372,412
tss_region
Chrysemys picta bellii
chrPic2
v3.0.3/chrPic2
8,478
Emydidae
reptiles
3
ucsc_multiz100way
chrUn_KK088237v1
20,047,103
20,047,358
-
22,294,289
20,047,230
20,047,231
1
1
CGTCCGGCTCAGCCACGCCGACATCAGCAGGCAGGGAGCGGCGCTAGGGAGCTACAATCCCCGTCCGGGAGCCCCAAGTGCGGCAGGGCCGGGCACCATCCAGGGCAGAGCCCGGCAGCCGGGAAACGAGCAGCCGCGGCCGAGCTCTGCTCCTTCCTGCGCCGGTGACCGAAACTGGGGAGCGGGACGCGCTGCTCATGGGCTGCCggccggggagcggggggggtccTCTCCGCCTCTCTCTGCAGCCGCCTC
+
fa1_tss_region_16_000010580576_000010580831
chr16
10,580,576
10,580,831
tss_region
Dasyprocta punctata
Dasyprocta_punctata
GCA_004363535.1
34,846
Dasyproctidae
mammals
1
zoonomia_cactus
DasPun_flattened_line_18622
31,131
31,386
-
69,412
31,258
31,259
1
1
CTGGGCGCGAGGCGAGGCCGCCGGGCTGTTTTGAAGCTCTGGGACGGGACTGCGCGCCCTCCCTCCTCCCTGGCGGCGGCGCGGAGCCTCCTCCCCACGGCCCCCTCCTTCGCGAGCCCGCCTCCCGGGCCGTGATGTCAGGAGCCCGAGCCGGGGGGAGGGACCGCGGGAGGCGGTGGGGGACCCTGGAGGGAAAGGCCAAGTGCCGGGAGCGCCCCCAGCGCCCGCCCGTCTGCCCGCCCGGGCCAAATCTAG
+
fa1_tss_region_13_000032031299_000032031554
chr13
32,031,299
32,031,554
tss_region
Nycticebus coucang
Nycticebus_coucang
GCA_004027815.1
9,470
Lorisidae
mammals
1
zoonomia_cactus
k141_8062688
10,046
10,301
-
24,739
10,173
10,174
1
1
AGGACTCGCTTCTTATTTGCTGGGCGCTGCTCTCGCTGCAGCCCTCCCAGGCGGCGGCCGCCGCTGCTTTCATTTCTGGGCTGCCATAACCAGCAAGGCCGTCCAGGTACGGTCCCGAGAGTGCCCACCTGGGCTGCGATCGGCTTTCTCGCGGCCGGCCTCCCGCACGGTGCAGGCGGCCGCGGGCCGAGCGCGGGGCCCGGAGCCCGGAGCCCGGAGCCCGGAGCGCCGCCCCAGCCCCTGCCCACCGTCTCA
-
fa1_tss_region_4_000127623270_000127623525
chr4
127,623,270
127,623,525
tss_region
Hydrochoerus hydrochaeris
Hydrochoerus_hydrochaeris
GCA_004027455.1
10,149
Hydrochaeridae
mammals
1
zoonomia_cactus
HydHyd_scaffold_3691
17,586
17,841
+
314,898
17,713
17,714
1
1
CGTTACCTTCAGCCCTCTGATCCGCGGCGCCGCCCGGGGCTGAGCTGGAGAGAGGCGAGGTGAGACCTCGCGGCCCGCTCCACTGGCCCTCTGTTATCCTCTGAGCGCCTTCGCAGCGACTCTGGAGGGGGCATGTTTCAGATGGGCAGGGTCAGCCTCCCTCAGCCTGCCCCCCGGAACCTGGAGGACCTGGACTCCGTGCAGCGTGTCCTGTTACACAGGTCAGTGTGGGCCGGGGGCTCGGGGAAGGACCGC
+
fa1_tss_region_2_000037148732_000037148987
chr2
37,148,732
37,148,987
tss_region
Indri indri
Indri_indri
GCA_004363605.1
34,827
Indriidae
mammals
1
zoonomia_cactus
k141_2622072
3,654
3,909
+
4,545
3,781
3,782
1
1
AATTGTTATGATCTCAAAGTTTTTAGCAGTTCTTCCATCTGATTCAGGTTTTCTTCTCTGCTGGTCTTCAGAATCAACATCCACACTTCCACTGATTATCTGCATACATTTTGGACAAAGCTTCCAACCAGGTAAAAGCTGTCTTCCAGATTTCGCATTCAGAAAAGCGGCATCATCTAAGTTAATTACATGCAAATTTGGGGGGCTAGCTTTTTGTGTATGTTAAATGGGTTACAACGTGACTTCTGCAAATCC
-
fa1_tss_region_19_000041902721_000041902976
chr19
41,902,721
41,902,976
tss_region
Chinchilla lanigera
Chinchilla_lanigera
GCF_000276665.1
34,839
Chinchillidae
mammals
1
zoonomia_cactus
JH722015.1
945,292
945,547
-
2,446,524
945,419
945,420
1
1
CAGCCCTAAAGCTCCTGCCCTTTGGCCGTGGTTAAGAAAGGGCAGCTGAGCCCACAGGGACGGCGCAGGCTGTGGTACCTGTGTTCTGCCCGATGCTTTGCAGCAGCAAGGGGTACTTGGTCAGCCGCTGCATCTCAGTGGGGATCATGTCCTTTAGCTGCAGGCGGCGGCACCGCGGGCGGCTCTCGGCTTCCTGAGGGGACACCAGCGCAGGGGGGGGATACCGGCCCCACCTCCACGGGCCCTGGCATCCCG
-
fa1_tss_region_1_000183471700_000183471955
chr1
183,471,700
183,471,955
tss_region
Lipotes vexillifer
Lipotes_vexillifer
GCF_000442215.1
118,797
Lipotidae
mammals
1
zoonomia_cactus
KE558071.1
880,622
880,877
+
1,656,451
880,749
880,750
1
1
GATGGAAGGGAAGCCAGGGGGAAGCCTGGGCACTTCCCGGGGAATCCACTCGCCAAGGGAGGGTCATTCTGTCTGCACACATTGGTTACTATGACAATACAACTACAGCCTCCAGTTGCCTTGGCAGTTGCTTGTCCAATCCGattggtttcttttctcttcatcccTGGGCTCCACCCTATCCCTTCCAACAGCCTCCCTGCGTGCAGGGGGTGGGGCCACAGAAAAGAGGAGGGGGTCCTTAGCTTCACTCTA
+
fa1_tss_region_11_000118607458_000118607713
chr11
118,607,458
118,607,713
tss_region
Equus caballus
Equus_caballus
GCF_000002305.2
9,796
Equidae
mammals
1
zoonomia_cactus
CM000383.2
26,426,889
26,427,144
+
98,542,428
26,427,016
26,427,017
1
1
AGCAAACGTGGTGGGAGCTCTTACCTCGCGGAGCGGGAGAGGGGACACCGATCCCTTCGCCTGGCTTGGCCGCCGCGGCCTCAGGCTCAGGAGGACAGTGTTGCTTGTCCCTGGGAGCCTGCTGAGTAGGAGGAGAGCGAGCGGGTcccgcccccctccccgctagtccccgcccccgtcccccgtcccGACCGCCTGCCCAGCCAGAGAAGACGCCCTTGTGGGGCTGGAGCCCAAGGTCCCCCCATCCACCCT
-
fa1_tss_region_20_000017681804_000017682059
chr20
17,681,804
17,682,059
tss_region
Eubalaena japonica
Eubalaena_japonica
GCA_004363455.1
302,098
Balaenidae
mammals
1
zoonomia_cactus
EubJap_flattened_line_45641
11,013
11,268
-
32,498
11,140
11,141
1
1
CTCGGGCACGCTCGGCCAACGCCCCTGCACGGGGTTCGGCCCGGCACACGCCCCCGGGGCCCGCCCGGACCCCCAGGGTCCGCGGCCGCGGCGACGGCCGGGGTCGCCGCCGGGGGAGGGGCCACCAGGGAGACGTGTCACTCTCGGCGCGGCCCGCCCGGCCCGGCCCCGGCGCCCCGACGGCCTGGCCCGCGCGCCGCCGCCGCCGCTGCAGGGCCCGGCCAAGTTTCTTACCTGCAGCCGGAGACGCGGGAG
+
fa1_tss_region_20_000050510192_000050510447
chr20
50,510,192
50,510,447
tss_region
Thryonomys swinderianus
Thryonomys_swinderianus
GCA_004025085.1
10,169
Thryonomyidae
mammals
1
zoonomia_cactus
ThrSwi_scaffold_10255
22,534
22,789
-
59,213
22,661
22,662
1
1
AGCGCTCTGGAGGGGAGGAGGCAGCACTCCCAGCCAGATGTCTCGCGGGGTTGAGGCCACTACCCCAGCCCCGCCTCTGACTCCGCCCCACGGAAGTTCTTGCGGACATTCACGAGTTGATGATTGGTCCTCCAGCCCAAGGGGCGGAGTGTGGGGCAGGCAGGGTGCGTACTTCCGGTTGCCGGGTTGACATGAAGTAGCAGCGGCTGCTAGGGCGGCGGTAGCGGTGTAGTCGTAGCTTGGAGCGGGCCTCGG
+
fa1_tss_region_1_000025904932_000025905187
chr1
25,904,932
25,905,187
tss_region
Giraffa tippelskirchi
Giraffa_tippelskirchi
GCA_001651235.1
439,328
Giraffidae
mammals
1
zoonomia_cactus
LVKQ01S004919.1
198,594
198,849
-
261,564
198,721
198,722
1
1
TTGGGCGTTTTGTTTTCTACATGGCAGACACAGACAAAGCAGGGGTGGGTATTTCTCGTTTGCACAAAGAGTGTAGGCAGTGTTAAGATGGCTCCGGTCTCACTAGGCGTTGAATCTGCACTATCTTCTCACCAGGGAGAGAATATACTGAGGGGCGGGGACCTCGTGATTTAAATCCCtgtctaattttaaaattcttaagtaGATTTTGAACGGGGAAGCTCAGTTAACCTCGTCTACAACCAACATTCTATT
-
fa1_tss_region_6_000114342962_000114343217
chr6
114,342,962
114,343,217
tss_region
Ceratotherium simum
Ceratotherium_simum
GCF_000283155.1
9,807
Rhinocerotidae
mammals
1
zoonomia_cactus
JH767729.1
36,168,021
36,168,276
+
57,674,156
36,168,148
36,168,149
1
1
GCGCCCACCTCTCGACTGAAGACACCTGCgcttccttccccacccttctCCGCCCTTTTCGCTGCGGTTTCTCCACTGCCTTTGGGAGCTcgggagcggcagctggaggaggagcagcaggagcagggagagggcgaggaggagtaggggcggggtgggtggggagagagccgggagGGTGTGGACTGGCAGGCACTCTGCAGCTGGTCGCCGGGGACCCGGTCCCTCCCGCGCGCCCGAGCGATGGAGGGGAAG
-
fa1_tss_region_X_000071212554_000071212809
chrX
71,212,554
71,212,809
tss_region
Mus musculus
Mus_musculus
GCF_000001635.26
10,090
Muridae
mammals
1
zoonomia_cactus
chrX
101,373,729
101,373,984
+
171,031,299
101,373,856
101,373,857
1
1
TTACAGAACACAGAGGGGCTGGCTGGACATTTCAGGTGACAGGAAGCTGTGAGATGTGTTTAAGGAACCGTGGGCAGACCTGTTAGACGagcatgcaagcaagttagcaagcaGAACTCCAGGAAGGAACCTCCAGGTCAATTATCAGCACACTCAGGGTTCCTGGAAGAGCTGGCGGGGCTTCTTCAAGAGACTCGGAGTTCAGGCCATGGGAAGTCCAAGAGTAGAAAAGATagtaaacaaaaaaggggggtg
-
fa1_tss_region_5_000052787915_000052788170
chr5
52,787,915
52,788,170
tss_region
Mungos mungo
Mungos_mungo
GCA_004023785.1
210,652
Herpestidae
mammals
1
zoonomia_cactus
MunMun_flattened_line_2326
335,952
336,207
+
401,375
336,079
336,080
1
1
CTCGCCCGCCTTCCTACCACCTTAGGGAGTTGGGGAGGAGAGCGGGTCACTCTCTCAATGAAAGGCAGATATCCCTTTAAGGTTTGCTTTGAAGCTGGTGGACTTTAGCCTAAACACGAACCCGGGAAGCTGGCTTTATTTGTCCATGTCTCGGACAGAGCCTGGGAGGCTGCCAGTGGGATTTCAGAGACCTAGCGCTCGAAGGGGCGGGCGTTGGGGCAGTTAGGTCTGGAATATGAAAAGCGTGGAGAGGAC
+
fa1_tss_region_X_000078945331_000078945586
chrX
78,945,331
78,945,586
tss_region
Bos taurus
Bos_taurus
GCF_000003205.7
9,913
Bovidae
mammals
1
zoonomia_cactus
CM000206.6
79,318,887
79,319,142
-
150,266,161
79,319,014
79,319,015
1
1
ACTTACCTTTAGGTTTCTGTGGTGAGACACCAAATGCACTCAACTTCCTCTTTCAATAACAAATTTGTCAGTTATCAGTAGGCTCCGAGCCACCAAGAGTTAGGCTTTTTCACCACCAACTCCCTGCAAAGAAACAAGCCCAGCAAGGCTCCAAGGTAAGTTTCAGCTTAACATATGGGAACTGGTAAAATTCCACGTGGGAAGGTTGGTGGGGGCATGAAGATCCAAGACAAGGGCAGACATGAGACCAGtgtc
+
fa1_tss_region_3_000179071560_000179071815
chr3
179,071,560
179,071,815
tss_region
Oryctolagus cuniculus
Oryctolagus_cuniculus
GCF_000003625.3
9,986
Leporidae
mammals
1
zoonomia_cactus
CM000803.1
74,497,539
74,497,794
+
163,896,628
74,497,666
74,497,667
1
1
GGTTCCGCAGTCACTTCCTGCAGCTGTTTCCCTGTGTGTCGGCTTGGACTGACTTTTGACAGTGTGCCTTCAGCTGTGGAGGGGCTCGGCGGCGGCCGGCCCAGAAAGTTGCTCCGAGAAGAGGTGGCTGGAGCCGGCGAGCCGGGCGCGCAGGGCGGACGGCCGGGAGGCGGCGGCGGGCGTCCTGGGCGGGCGCGGCGCCGAGGCTGCTGGCGCGTCCCGGGGGTTCCGGTGAGTGCTGGCGCTTGGGAGCCT
-
fa1_tss_region_15_000075202009_000075202264
chr15
75,202,009
75,202,264
tss_region
Eubalaena japonica
Eubalaena_japonica
GCA_004363455.1
302,098
Balaenidae
mammals
1
zoonomia_cactus
EubJap_flattened_line_6678
60,400
60,655
+
98,325
60,527
60,528
1
1
GCAGCGGCGAGACCCCTGCCCCGCAGCCCGCCAGCCGGGGGTCCGCGGCAGCCAGGAGCCACGCCACCTCAGCCCAGGCCCAGCGCGCTCCATCCCCGGGCCGGCCGGCAGGGGCGCCCTGGGGCAGCGCCACCCGCCCCTTCCCCACGCGCCGCCCGCAAACTTGGCCCAAGTTTCCGCGCCCGCCGAGTGGGCGAGCTCCTACCTGCAGGGCACCGGAGTTCCCGCTGCTGCTGCCCGGGGCCGCGGCCGCAT
-
fa1_tss_region_9_000086354217_000086354472
chr9
86,354,217
86,354,472
tss_region
Eschrichtius robustus
Eschrichtius_robustus
GCA_004363415.1
9,764
Eschrichtiidae
mammals
1
zoonomia_cactus
EscRob_flattened_line_9072
84,612
84,867
+
132,502
84,739
84,740
1
1
CAGCGTTGAGCGCCGGAAGTGGGGCTGGAGGAAAACACGGAGAGGGAGCCCGGCCGGGACAGGAAGAGGCGGGGGGTCGCGGCGGAGGTGGTGAGTGCTCACGGGCACCGTTTCCCCCCGTGTCCCTGTCAGACTCGCGTCCGGGGAGGGTCTTGGGTGGGTTCTCCGGTCTGCAGAGTCGAGGGTAGGCCCGGCCCGGGAGATACGTTGGCTCCATCCTCCGCCGGCCTCCTCTCCCCAGTTGCGAGGTCCAGG
-
fa1_tss_region_13_000035476138_000035476393
chr13
35,476,138
35,476,393
tss_region
Geosciurus inauris
Xerus_inauris
GCA_004024805.1
3,371,099
Sciuridae
mammals
1
zoonomia_cactus
XerIna_scaffold_1094
218,025
218,280
-
285,810
218,152
218,153
1
1
GTTGGGACAGAGATCCGGATTGTATACCGGAGTCTCGCAGTAAGCTGTGGGATCCAATGCGGCTGCTAGAGCTGGAGCCAACTTCGGTGGAGAAACGGGCCGCAGCGCTCAGAAATGTATCAAAAGTGTGTTTCCGATGTGCTGCAGCGGTGGCTTCCCCGCTGCTGCCGCTTTCCCCTTGCTTTTATCTTTGAGCCCAGCCGGTCTTAAAGTGAAAGATTGTTCTCCCCCCTTTCTCTGTCTCTCTTCCTCTTT
+
fa1_tss_region_6_000024720413_000024720668
chr6
24,720,413
24,720,668
tss_region
Ceratotherium simum
Ceratotherium_simum
GCF_000283155.1
9,807
Rhinocerotidae
mammals
1
zoonomia_cactus
JH767762.1
1,768,338
1,768,593
-
22,380,538
1,768,465
1,768,466
1
1
CTGCTGCCGCCGCTCAGCCCCCACCTGGGACCCATAGTCTGGCTCGGCGCCCCGGGCGGCGGCGGAGGGAAAGACGCGGAGACAGAGGCGAcgacgagagagagagaaaaggaggaaaaacgAGGAGAAAGAGGGGTAGGATCGGTACTggcggcggagggggaggggaagaaggggaggggagccCTGCGCTAAGGGATCTGTCAGCGAAGTAAACCCCCCAAAATAAAGTTATTTCAGTTCAAGCATCTGCTC
+
fa1_tss_region_2_000165517789_000165518044
chr2
165,517,789
165,518,044
tss_region
Noctilio leporinus
Noctilio_leporinus
GCA_004026585.1
94,963
Noctilionidae
mammals
1
zoonomia_cactus
NocLep_scaffold_5613
140,063
140,318
-
197,137
140,190
140,191
1
1
AAAAACTTGAATAGTTACAAAGTTACACCTCAGATCTGTAAAAGCATGAAAATAATGTAAATAATAATGTATAAACTGCTAACCTTGAGATCTCATGAACTCCAAGATCTTCTTGAAGTCTCTATACTTCTGGGAACATCTTTTTAATCTGTTGATATCTCTGTATTTTTTCCTAAAAAAAAGACAAATGTTCCAATGCTTTATAAGGTTATATTTTCAAAGAGTAAATCTGACTACAAAGCATAAGTATGACAC
-
fa1_tss_region_11_000065638602_000065638857
chr11
65,638,602
65,638,857
tss_region
Ateles geoffroyi
Ateles_geoffroyi_a
GCA_004024785.1
9,509
Atelidae
mammals
1
zoonomia_cactus
k141_1722200
6,931
7,186
-
79,999
7,058
7,059
1
1
TGCACCCAGCCTGTGGGCTGCCTCTTGCTGTGTGGCCCAGTGCCAGCTCTGGCACTGCCTTGAGGGGTGTTCTTGGGCTCTGCCCCCCACCCTGAAGCTTCACATAGGGTCCATTGAGGCCAGGACATTCCTCCGGGCCTGTGTCACTAGGAGTAGGGGGAAAGGGCCGGCCCCGCCCCCACAGATCCGGAAGGCCTGGCTGCCCCAGGAGGAGGAGTTGGCCACTTCCCAGCACATCTGGAGGTCATGACCCCA
-
fa1_tss_region_X_000107116452_000107116707
chrX
107,116,452
107,116,707
tss_region
Noctilio leporinus
Noctilio_leporinus
GCA_004026585.1
94,963
Noctilionidae
mammals
1
zoonomia_cactus
NocLep_scaffold_15631
54,012
54,267
+
67,979
54,139
54,140
1
1
agacttagggaaggtacttagtggaatatggaaggatctgcagaggaagagacacagaagcaaaacgctgcctaatatgtagatgttggtcaaggaaagagggatgggaaaggagtgttccatccagGCTTTCAGAGGTACCACCTGGAGGTGAGGGTCTGTGATACCCTACTAGTTTGCAAAAACACTTACTCCTCAATGGAGACAGAGGTGTCAAGTTGATGCTGAAGGAGGCTTTTCAGCTGCCTCTCCCCT
+
fa1_tss_region_4_000133149421_000133149676
chr4
133,149,421
133,149,676
tss_region
Lipotes vexillifer
Lipotes_vexillifer
GCF_000442215.1
118,797
Lipotidae
mammals
1
zoonomia_cactus
KE558876.1
3,641,626
3,641,881
+
4,864,269
3,641,753
3,641,754
1
1
TTCACACTTACAGAGAGGCAAACGACGGTGGAGATGAGGACAGAGAGCAAGGCTGTGAAagccaaaaaatacaaatagagcgaaagaggaaaaaatgccaAGAAGAACATCCATCCGGAGAAATGAAGAGAATGAAAGTTTTATGCTGCAGAATCGTTCTATGCTTTTTCGGCACAAAATTCTCTCGCCGTTTTTAAGCTCTTCTGCATTTGCCAGCCGTTGACGTTAAGAGGCATGTTCAGCGGTGCCAACAgc
+
fa1_tss_region_9_000014314717_000014314972
chr9
14,314,717
14,314,972
tss_region
Eschrichtius robustus
Eschrichtius_robustus
GCA_004363415.1
9,764
Eschrichtiidae
mammals
1
zoonomia_cactus
EscRob_flattened_line_2432
67,517
67,772
+
231,827
67,644
67,645
1
1
CTTGCTTCTCTCTCTCTCTCATTTGTTAAAGCTCTCATACCACTGCAACAGCACCACGACTTTTTTTTATTATTTTAAATAGATCTTCTTTCCGCCCTTTGGGCAAGTCCCGCATCCCCCCCCCCACCACCACGTACACACCCCTCGAAAACCCGCCCTGGAAGAGGTATTTCGGTGCTCGCTGCGGACTCTTTAAACCGCGGGAACCTCCGAGTGGGAGAAGCACTGAGCCGGACTGGGCCGGAGAAAGGAACG
+
fa1_tss_region_3_000017623660_000017623915
chr3
17,623,660
17,623,915
tss_region
Chelonia mydas
cheMyd1
CheMyd_1.0/cheMyd1
8,469
Cheloniidae
reptiles
3
ucsc_multiz100way
KB480854
8,298,525
8,298,780
-
10,136,746
8,298,652
8,298,653
1
1
AGAATTGAAGTGATAAGGTGTtgtgggaaaaaacccacaaaacctcTACATGCTCTGGAGAGATTCTGTAGGAATAAAAATCTTGAATGATTTTGATCAGCTGTTGTGTATGCCCTGCACAGCAGTTGGCTCAATCAATTTTATGTTTTGGGATGGTTTTATTAAAACGAGCTGCTGCTTTCAGTAAATCATTGAGAAAGATGCTAACTTTGTATATGCATTTTTGGGCCTGCAGCTTACCAATGCAGCCTCTCA
-
fa1_tss_region_15_000025407037_000025407292
chr15
25,407,037
25,407,292
tss_region
Ochotona princeps
Ochotona_princeps
GCF_000292845.1
9,978
Ochotonidae
mammals
1
zoonomia_cactus
JH802156.1
249,881
250,136
+
3,883,271
250,008
250,009
1
1
GAAGCAAGCAAATCACTTCTGTGACATTCCTGCTTTCCACCAGCCTTGTGAGTAAATGCACCAAAACAGCTTCCAAACCTCTTTCTCCCAAACCGAAGAGCTAAAAACTAATGATAACCCCAAGTTCCAGCTTACTCATTGTTGAAAGTGCAGCCCTCTGGCATCAGATGTCATACTGTAAAAGTGGCAGAGCTGGCTTGCCAAACAAAAAATACACCTGCTGGTTCTCAGTGAAGAGGCAGGTTAGAATTTTTC
+
fa1_tss_region_1_000093681747_000093682002
chr1
93,681,747
93,682,002
tss_region
Zalophus californianus
Zalophus_californianus
GCA_004024565.1
9,704
Otariidae
mammals
1
zoonomia_cactus
ZalCal_flattened_line_1719
264,426
264,681
-
326,600
264,553
264,554
1
1
GATACGAGGAGAACCAAACTCTAGAACCCGGCAGAGGAGGGCAAGGCAGGTCACGCCATGTAAATGTCGCGGGGGATTCCGCGAGGCCGCGCGAATCGGCTCGCCGGGGTGGGGCCGCGGCGCCGCAAATCACCAGTTGAGGGCTGGAGCGCGCGCCGCGGGCTCAGAGCCGCGCCTGCAGCCGCCGGGGCGGGAGACGGAGCCGCCGGAGCCGCACGGGTGAGCCGTGCCGCCGGAGCCGCACGGGTGAGCCGC
-
fa1_tss_region_11_000013356552_000013356807
chr11
13,356,552
13,356,807
tss_region
Thryonomys swinderianus
Thryonomys_swinderianus
GCA_004025085.1
10,169
Thryonomyidae
mammals
1
zoonomia_cactus
ThrSwi_scaffold_4406
9,464
9,719
-
80,464
9,591
9,592
1
1
TGCTGAGGTTCAAATGACTAGGGTCATGGTACCTTCCATGAGGGTCATCTTTGTCTGTGTCCATGCTTTCTCTGCAAAGACAAGAGAATGTGGCTGCATGTTAGTAAAGACGCACAGGGTGGCTTCTTGTCACAACACAGAAGGCTCGCATTTATCCAGAAACTCAGGTTAGAGAGCTCAGGCGGCCAGAGCACACAGCCATGGGACTTATCATAGTAATACAGGGGAAAACAAGCTGCACTGACTACAGAAGGC
-
fa1_tss_region_12_000001690987_000001691242
chr12
1,690,987
1,691,242
tss_region
Eubalaena japonica
Eubalaena_japonica
GCA_004363455.1
302,098
Balaenidae
mammals
1
zoonomia_cactus
EubJap_flattened_line_12663
64,841
65,096
+
74,863
64,968
64,969
1
1
CCGGCTTGGGCCAGTGCGGCTGCGCACGAGGAGCGCTCTCATTGGCCAGAGCCGCCTCTTGCGATTCGCGTCACGGCGGCGGCGGTGTGAGGACCCTCCCGGACGCTGGGTCGCGGCGGCGGCAGCGGGCGGCCCCTCCGCTGGTTTGGGGTCCCGGCGGCTGCGGTTCCGAGGAGCCCGAGAAGCGTGGCGAGGCGGCGGCGAACTCTGGTGAGTTTCTCGAGTGGGAGCACGGGCCAGGCCGGCGGGGGCGAG
+
fa1_tss_region_3_000134373771_000134374026
chr3
134,373,771
134,374,026
tss_region
Miniopterus schreibersii
Miniopterus_schreibersii
GCA_004026525.1
9,433
Miniopteridae
mammals
1
zoonomia_cactus
MinSch_scaffold_6593
116,240
116,495
-
135,484
116,367
116,368
1
1
CCTCCTTCCCTCCCTCGCCAGCCCTTTGTTTTCCGAATGCTCCAGCGCTGACGTCACCGGGCTGGACCTCAGGCTGCATTCTTTCTAAGTGAGAGCCAATTCGTGGCTCCAAAGAGGATTTTCCAAGGAAGACAAAGAGGAATTCTTGGACTAGTTGGGGGCAAAAGCACCTGTAACCCCCACTTAATTAAATCAGCACCAGGGCCCTGAGGCTTCAATTCGAAACGACGCCTCTTTCCTTATTCCACGCCCCTC
+
fa1_tss_region_11_000008794842_000008795097
chr11
8,794,842
8,795,097
tss_region
Dasyprocta punctata
Dasyprocta_punctata
GCA_004363535.1
34,846
Dasyproctidae
mammals
1
zoonomia_cactus
DasPun_flattened_line_39627
27,061
27,316
+
38,597
27,188
27,189
1
1
ATTTGATTGCATTAGAGTAGGTGACATTTAAGCCTGGAAAAGCTTCCCCCTGCCCTTGACACAGCCTCCTGGTTGGCAGGCCTGTTTTAGGAACTGCAAGCAGGCTAGGACTAAGTGTGTTCTGTTGATTAGCCAAGTTTACACAGGACATGCCTGGGAGATTATGTTTTTAGCTCAGGAGTTGAATTTCAAGGACAAAGTCCACAGTTGGCAGTTGAAAGGCTGAAAACACCTGGAAGAGAGGATTTCATTTGG
-
fa1_tss_region_1_000103695535_000103695790
chr1
103,695,535
103,695,790
tss_region
Taeniopygia guttata
taeGut2
taeGut324/taeGut2
59,729
Estrildidae
birds
2
ucsc_multiz100way
chr8
7,239,683
7,239,938
+
27,993,427
7,239,810
7,239,811
1
1
GTTTGGATAAAATACAGTTCTCATACAAAGTAACAGGTAGGTAACACCCCGAGATGGGTGTTTATCTTTAAATGTGTATTTTCTAATGTGTACTTTTACCCTCTTGCAGGAACACTGACAGTAAGAAGAGCACAGCTGATCGCAGAGCACTGGATGGGGATCTATTTACTGCTGTTAATTGTAGGGCTTTGCTGGGGGCAGTACAACCCCAACACTCTCCCTAAGAGAACCTCTATTGTGCATCTCTTCGAATGG
-
fa1_tss_region_22_000035258347_000035258602
chr22
35,258,347
35,258,602
tss_region
Ochotona princeps
Ochotona_princeps
GCF_000292845.1
9,978
Ochotonidae
mammals
1
zoonomia_cactus
JH802099.1
9,002,051
9,002,306
-
18,007,340
9,002,178
9,002,179
1
1
AGCAGCACTCACAGCCCCTGCCAGCTCGGGAAGCTTGCAGGGAGCCCGCAGCCTGCGATGGGGAGGCACCGAATTCTCCCATCGCAGGGCAACGAGGCAGAACCACGACCACCGCACAGATCGGCTGACAACACACATCCCTCAGAGGAACTGCGATACAAAATCTGACAAGCCGCCTCGATCAACAGGCTTTATTTctggttcagttttttttttggaaagttattCTGCTGTGAGCCACCAACTCAGCCAACA
-
fa1_tss_region_11_000124877018_000124877273
chr11
124,877,018
124,877,273
tss_region
Hipposideros armiger
Hipposideros_armiger
GCA_001890085.1
186,990
Hipposideridae
mammals
1
zoonomia_cactus
JXIK01000292.1
2,493,515
2,493,770
-
2,759,547
2,493,642
2,493,643
1
1
ctagaaattctgatgaaatcggtccagggtgcaggctgagTGGTGGAAATGGGATGGGGccaaggaatggaaaaagagtaTGGATATTTCTGACCCTTCTCCCAtttcccctcttctttctcccacGGGTTCTTTTCGGAAGCTTCCTTCGCCTACACACCTGCAGGTAAGCCATCTCTGCCCTGTGGGGTTCAGACCCCCAGTACTGGCTCTTCTCTCATTGGGTCTCTCCTCATCTTCCCCAGTGTCCTTCCC
+
fa1_tss_region_5_000084384630_000084384885
chr5
84,384,630
84,384,885
tss_region
Dipodomys ordii
Dipodomys_ordii
GCF_000151885.1
10,020
Heteromyidae
mammals
1
zoonomia_cactus
KN672374.1
6,287,772
6,288,027
-
16,717,608
6,287,899
6,287,900
1
1
CAGCCCTCCGCGGCGGGTGGGTCCTGGCCGAGGCGCGGCGGGCGGGGCGCAGGCTGACGAGGCGGCTCTGGGTCTCCCCAGCGGGCGGGTGGACCCGAGGGCGAACCCGTCAACCGGGGCGCCGGGCTCCTACTGCTCCCGCCCCTGCGGCTGCGGGGCTACTGACTTGGAGAACAATGAAGCGTGAGCTGGTGGGGAGCGAGTCAGCGGCCGGGAGCGCACTGTGTACAAACAGAGGCAGCGTGAGTGTGAGCC
+
fa1_tss_region_17_000041689887_000041690142
chr17
41,689,887
41,690,142
tss_region
Eubalaena japonica
Eubalaena_japonica
GCA_004363455.1
302,098
Balaenidae
mammals
1
zoonomia_cactus
EubJap_flattened_line_19227
7,398
7,653
-
60,617
7,525
7,526
1
1
CTACTGTCCAAGGGATCGCTGATGATTACGATAAAAAGAAACTAGTGAAGGCGTTTAAGAAGGTAGGTTTTTAATGAGATTGTAGGGAAATCGCATTTACCTTGCCTACATGGGGCTGCTGTCCTGTATTACTTCCTGAAAAGGGTTATTAGTGGCATTCAGGCCGTTGCGCTGCCTAACTTGTTTTGCTTGCGTTGTCCTTGCAGAAATTTGCCTGCAATGGTACTGTAATTGAGCATCCAGAATATGGAGAAG
+
fa1_tss_region_1_000161045873_000161046128
chr1
161,045,873
161,046,128
tss_region
Cavia porcellus
Cavia_porcellus
GCF_000151735.1
10,141
Caviidae
mammals
1
zoonomia_cactus
DS562911.1
10,856,524
10,856,779
+
11,989,055
10,856,651
10,856,652
1
1
CGGCCGCTGATTTCCCCCGACAGCGTTCTCCCTCTCCCGACCTGGTTATCTCCATAGACAACTGCTCATGCGCACTCCCAGCTCGCGGCCATGTTTGTGAGGGGCGGAAGTGTCTCCGCCTCCCGCCCTGCCCACTCACAGCCTCCGAGCAGCCCTACTTCCGCTCGTTCCGCGTTGATGAGGGTTGAAGGATGCGTAGGTGTGCGGTGTTCGTGTGTCAGGCATGGGGCTCTGTGGTGCTGAAAAGAAGCTGTA
+
fa1_tss_region_21_000031872763_000031873018
chr21
31,872,763
31,873,018
tss_region
Oryctolagus cuniculus
Oryctolagus_cuniculus
GCF_000003625.3
9,986
Leporidae
mammals
1
zoonomia_cactus
CM000803.1
161,995,968
161,996,223
+
163,896,628
161,996,095
161,996,096
1
1
CAAATCCTCGTAGCCCCTCCTTCGCCGCGCGCAACAGCCACGCTCGACCCTCGctcgggaggggagggggcagcgagCGAGCGGCGGCGCCACCTGAGCGCCAGACGCGGGGGACCCTGCGGGGCCGCGCACACGCGCGCTCCCGGACCGGCTTAGCCTCTCCTCCGGATTCCGGGCTGGGGCTTTCTGGACCTTTCGGTGCTGTGATCCCCCCCACCAGCCGCACCCacttggggctgggggaggtagCGAGGC
-
fa1_tss_region_12_000049055324_000049055579
chr12
49,055,324
49,055,579
tss_region
Microtus ochrogaster
Microtus_ochrogaster
GCF_000317375.1
79,684
Cricetidae
mammals
1
zoonomia_cactus
CM001680.1
5,885,360
5,885,615
-
46,045,664
5,885,487
5,885,488
1
1
CTCTCTCCGACTGGGCAGGGCCCTCTCGGGGAGACCTGTTGGTGCCAAAAGATACTCGTATGTACAGTAAACTTCTCCAATGAGCCTTTTCCCCATTATAAGAAATCAACTAATGGTAATCAGACCCTTTAGACATCAGAAAAAAACCTTGTCTTGCAAACTTCTATAGTAATGACAAGTAAAAGTATTTGAAATCGTATTCCACCACCAACCtcttccccaaacacacacctCCTCTCATCCTGATTCCTACTT
+
fa1_tss_region_15_000041774739_000041774994
chr15
41,774,739
41,774,994
tss_region
Aplodontia rufa
Aplodontia_rufa
GCA_004027875.1
51,342
Aplodontiidae
mammals
1
zoonomia_cactus
AprRuf_scaffold_16986
44,341
44,596
+
68,138
44,468
44,469
1
1
GGGGTGGGATCCTGAACCGCGAACCTTGCCAGGCCCACGCCTGCGAGAGGCGTTTAGCTGAATGGGATAGATTTAGTAGGACTGGTGGCAGGTCTGGTTTCCGTTAATGCCGAACTGTTCCCTGGTTAACTGCGGGGTCCCAGGGAGGAGGCCACTGGAGAGGTCCGCGGGGGACCGTGAGGGCGGCTGTGAGGACTCAGTGTGGCTGGGCTCGCTATGGCTCTGTAACTGGTTCTGCTACGGGAGCCTCCCTCC
-
fa1_tss_region_22_000050455418_000050455673
chr22
50,455,418
50,455,673
tss_region
Odocoileus virginianus
Odocoileus_virginianus
GCA_002102435.1
9,874
Cervidae
mammals
1
zoonomia_cactus
KZ104696.1
1,750,409
1,750,664
-
3,078,378
1,750,536
1,750,537
1
1
GTCCCGTGGTGCTGGCCTGCATGACCACCTCTTTTGTGGATGTGTGGGTCCTGGGGCCCTGGGAGGTGCTGAGGGGTGCGGGTCCCCGCAGATCCACAAgctgctgcaggtgtcggtgctggtggtggagctCCTGGACTCGGGCTCCTCCGTCCTGGTCAGCCTGGAGGACGGCTGGGACATCACCACCCAGGTGCTCGGGGGGGGGGCAGGGACATCCCCACTCAGGTGTGAGGGGGCGGGGACATCCCCACT
-
fa1_tss_region_1_000205228167_000205228422
chr1
205,228,167
205,228,422
tss_region
Nesogale talazaci
Microgale_talazaci
GCA_004026705.1
2,583,312
Tenrecidae
mammals
1
zoonomia_cactus
MicTal_scaffold_42444
16,085
16,340
-
39,050
16,212
16,213
1
1
CCCAGCGGCCGTGCCAGCCGGGAGGGATGCGCCGTGCCGCCCAGCGCCCCTCCGCCCTGCCCGTGCCCCGAAGCAGAAAGTTTAGGGGTGGGGGCTTCTTCCCCCGCCCCCTCCCGTGACCGTCCAAGGACTTCTGTTGCCCAGCCTCGACTGGGACCTCCGTTGGCTCTCCAGGCCGTCACGAAGTGTTATTCCAAGCTGTACCCGGGGCTCCCCTTCCGCGCCCCTCCTTCGCCCCCTTTCTTTTCTTTCCAA
+
fa1_tss_region_5_000154048913_000154049168
chr5
154,048,913
154,049,168
tss_region
Loxodonta africana
Loxodonta_africana
GCF_030014295.1
9,785
Elephantidae
mammals
1
zoonomia_cactus
GL010028.1
74,467,919
74,468,174
+
111,286,942
74,468,046
74,468,047
1
1
GCTTAACGATCCTGTATTTCAACCTGTACCATTACCATCTGTTGTTATATCAATAATGTAAATCAACTGGTACATCATAATCATAACCGTGCAGCTCAAAATTTGAGTATTCAAGTACATGGATATATCAGATATAAATAATGCAAGGACACTGGAGatagttcttttgtttttgtttcaacattagaaaaaaaattgcacttattgctatatatatatatatatatatatatatatatatatatatatatatat
-
fa1_tss_region_3_000167735608_000167735863
chr3
167,735,608
167,735,863
tss_region
Paradoxurus hermaphroditus
Paradoxurus_hermaphroditus
GCA_004024585.1
71,117
Viverridae
mammals
1
zoonomia_cactus
ParHer_flattened_line_11383
60,235
60,490
-
96,915
60,362
60,363
1
1
GGGGCAGCAGCAGGAACAGCAGGGGGAGGAGCAACAGCTGCCGAATTCACCAACTAGAGGAGGGGGAGGCGGAGCTTGGGTCCCTGTAGCAGCCGGAGGCGCAGTCTGGACTGTAGTTTCCCGGGAGAGACGAGAGCAGAAACACGAGCCGAGCGGAGCGCAGTCCTCCGAACATCAGCTCCAGCATCCCACCAGGGGTTGCAGGTGTGTGGGAGGTAAGCGTGGGTGCCTCTTCTGGGCGTCCTCTCACTGCCC
+
fa1_tss_region_2_000096869038_000096869293
chr2
96,869,038
96,869,293
tss_region
Craseonycteris thonglongyai
Craseonycteris_thonglongyai
GCA_004027555.1
208,972
Craseonycteridae
mammals
1
zoonomia_cactus
CraTho_scaffold_40620
10,012
10,267
-
27,590
10,139
10,140
1
1
CAAAGCGTCGGCGAAGGGAGCGTGGCGGAGCCCGACCTACGGACGCCCCCTGTCGGCCCAGGACCCAGCGCGGGAAGGGCGGGGGGCTAGGGACACGCTCACCCCCACTAGTGTCCAACACCTCTCCAGCCCTCCCTGTCCCTCACCCCAGTCCGGGCAGGACCCCGCGGAGCACTCCAATCTGCCGGTACAGCGGCGTCCCCACCCCCAGGTCCTCCCTGGGCGGGGGCAACAGGGCAGCCCCGGGGTGGGAGA
+
fa1_tss_region_15_000040240393_000040240648
chr15
40,240,393
40,240,648
tss_region
Cryptoprocta ferox
Cryptoprocta_ferox
GCA_004023885.1
94,188
Eupleridae
mammals
1
zoonomia_cactus
CryFer_flattened_line_584
154,133
154,388
-
577,046
154,260
154,261
1
1
GCCTCGAGCTCCTCACGGCAGGCTGGTGCTTGTCAGGAGCCCAGGAAGCTGCACTCCCTTCAGGCAAAAACAGAGAAAAAGGAAAAGAAGAAGAAAACCTCAGTGCCTTTCTCGCCTAGCCGCTTCTCCTGAAGGCTCCTGGATGGTGTCGTCCTGCCTCTGTGGGCACCCAGCCTCCTCCCTCTGGCAGCTTACTCACCGGTGTGCCCGTGAGGCTGCCAGCTGTCCGGGGGAGGCGGGGGGAGGTGGCCTACG
-
fa1_tss_region_12_000070637395_000070637650
chr12
70,637,395
70,637,650
tss_region
Aotus nancymaae
Aotus_nancymaae
GCA_000952055.2
37,293
Aotidae
mammals
1
zoonomia_cactus
KZ204454.1
5,649,742
5,649,997
-
10,355,161
5,649,869
5,649,870
1
1
GAGATTTACTCTGCTCTTGAAGGCTGGaatattttctacataaaaaaaGAGAGGTAATCATAATCCCTTCTTTCTAAGGAAACAGACAAAAGGACACTGGTATAAAACTTCCCCAAACAATTCAATAGGAGGAAGTGCTCGTCACTGACTTTTCCCCCCACCATGAAGGCACATTTCCTTCCTAGTCTTTGCTTCTCTTAtctgggagaatttttttttcccaagcgAAGCATGAACAGTTGCTAATTGGAAATG
-
fa1_tss_region_4_000113116952_000113117207
chr4
113,116,952
113,117,207
tss_region
Homo sapiens
hg38
hg38
9,606
Hominidae
mammals
0
human_reference
chr4
113,116,952
113,117,207
+
190,214,555
113,116,952
113,117,207
1
255
AGATGTGATTTTCCCCACCAGGGCAATGGCTGGCAGCCAGAACACTCACAAGATAATCCACTCCGCCCCCGAGCTAGGTCATAATCTTGCTCCAGCCTCTGCAGCACCCACAACTCACTACAATGAACTAAGGTCCCAAACCGAGACCTCCAGCAGCACACACCTGCACGCACACAGGCATAGGTGTGCACCCACACTCAGAAATGGTCCCGGGGGAAGGCGGAGCACTAGACTTCCAGCTCTTCAGCAGTTGGG
-
fa1_tss_region_13_000100674646_000100674901
chr13
100,674,646
100,674,901
tss_region
Hippopotamus amphibius
Hippopotamus_amphibius
GCA_004027065.1
9,833
Hippopotamidae
mammals
1
zoonomia_cactus
HipAmp_scaffold_10726
112,505
112,760
+
117,120
112,632
112,633
1
1
CGGGCGGTGCGGGCGGCGCGCGGCGCGGGCAGGGGGGCGCGGCGGGGGGCGGGGGCGCGGGCGGCCCCACCCCCTGCCCGGCTGCGGGCGGGAGCCGAGAGCCGCCGGACTTTCCGCGCCCGGGAGGGAGATGCGGCCGCCGCTCGGGCTCCTTGCAGGTAACGCGTGGGGCGGCCCCTGCAGGGCTGAGCGCGCCGCGGGGCGAGCGGAGTTGGGTGCGGAGCGGGCGCGGGGTCTCCGCGGCCGCCGCGCCCC
-
fa1_tss_region_8_000022614351_000022614606
chr8
22,614,351
22,614,606
tss_region
Catagonus wagneri
Catagonus_wagneri
GCA_004024745.1
51,154
Tayassuidae
mammals
1
zoonomia_cactus
CatWag_scaffold_490
43,174
43,429
+
351,482
43,301
43,302
1
1
TGTTGAGTGTCTCCTTCATGCTGCCCTGCCCTGCACAGGTACTGCTACTCTCTTCCCCGGGGCTGGAGGAACTGTATCGTTGCTGCATGCTCTTCGTGGATGACATGGCTGAGCCCAGGGAGACACCAGAACATCCTCTGAAGCAAATCAAGGTCAGAGCTGGCGTCCAGGAGCCAAGATGCAGTCACTGAAGACGTCCGGCCCCTGTCAGGACCACTTACTCTACCGGGAGGATGGCGAGGCCTAGAGACGTTC
+
fa1_tss_region_18_000023535290_000023535545
chr18
23,535,290
23,535,545
tss_region
Myotis lucifugus
Myotis_lucifugus
GCF_000147115.1
59,463
Vespertilionidae
mammals
1
zoonomia_cactus
GL430341.1
422,704
422,959
-
555,168
422,831
422,832
1
1
GTGATCATGTGTGTCACCATCGCCATGATCCTGGTCAACATGTTTGGTGTCATGTGGCTGTGGGGCATCAGCCTGAACGCGGTCTCCCTGGTCAACCTGGTCATGGTGAGTCCTGGGTCACTTCCTGGGGCCCGTTTCCAGGAGAGACGGCCCAGCTCTCATCTCCCTGCACATGGAGGCGGGGCCACAGGCGGGCGAGTGGGACTGGACGTCACGTGCACCAGTGGCGTGTGATGTCACGGCCTAGCGTGGCAG
-
fa1_tss_region_11_000111912492_000111912747
chr11
111,912,492
111,912,747
tss_region
Symphalangus syndactylus
Symphalangus_syndactylus
GCF_028878055.3
9,590
Hylobatidae
mammals
1
zoonomia_cactus
tarseq_39
43,293,119
43,293,374
+
47,666,813
43,293,246
43,293,247
1
1
CAGCGAGGCCTCTTCATGCCCCAGGCACCACCAGCTCCCCCTCCCCAGCTCGTTCCCAGCCAGGACCCTCAGCTGTCCTCTCAGGCTCCCTGTGACAGCTGAAGAGTGTGCGGGGGAGGGGACTAGGGGTCCGGGCGGCGCTGGTCACACCCTCGTTGCTCTCACTCAGGGCATCCATTCCCCGCCCCTCCACCCCCGAGGCTCCGCACTATTTTGGGTGCTGTCGACCCCGCCCCCACCTCCTATCGAGCCCCG
+
fa1_tss_region_12_000026937640_000026937895
chr12
26,937,640
26,937,895
tss_region
Eubalaena japonica
Eubalaena_japonica
GCA_004363455.1
302,098
Balaenidae
mammals
1
zoonomia_cactus
EubJap_flattened_line_1599
23,517
23,772
+
153,044
23,644
23,645
1
1
CTGACTGTGCGCTGACCCTCCCCACCCAGCCAGCAGCCTTTTCCAGACAGGCTGTGGTGCATAGCCTCTGTTCGTTTTCACTGCAGGACCAGGCACGAAAGTAAGCGAACCTCGATGCTGAGGTCTTCCTTATCCACTCACCTTGTACTTTCCACCCCCCACTTTCCAGCAGAGTGTGTCTAGGTTTCTCAAAGAAGAGTTTTGCGTGAAGGGGAAATGCATTTGAAAGCAGGAGAAGAAAATAGCTGGATTGTA
-
fa1_tss_region_X_000110318071_000110318326
chrX
110,318,071
110,318,326
tss_region
Anolis carolinensis
anoCar2
AnoCar2.0/anoCar2
28,377
Dactyloidae
reptiles
3
ucsc_multiz100way
chrUn_GL343376
89,367
89,622
+
1,074,340
89,494
89,495
1
1
CTGTCGCCGCCGCCGCAGCAGCGCTTCCGATCCATGGAGGCCGAgggggcggtgcctggcgggcggggggcggggcgagtgcggcgggAGGACACGCCCCCGGAGGGGCAGGCCACGCCCCCGGCGCCTCCtgcaaggggaggggagggggagagagaatgagaatgggaagagggaaggggagggggagggaagatggagggaacaggaaaggagagaagatagagggaggaagaaagagaatggggagaaaga
+
fa1_tss_region_2_000213151721_000213151976
chr2
213,151,721
213,151,976
tss_region
Catagonus wagneri
Catagonus_wagneri
GCA_004024745.1
51,154
Tayassuidae
mammals
1
zoonomia_cactus
CatWag_scaffold_3884
192,159
192,414
-
193,368
192,286
192,287
1
1
AGCGTCGCCAGCGGGGCCCGCGGCGCGGGGACTGGCGGGCCAGAGGACGGGCGTGCGCGCGCGCGCTTGtgtgtgtgcggggcctgggcgccagtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgcgcgctcgggctggcgaaggcgcgtgtgcgcgtgtatgcgcgcaggGCCGCTCGGCGCGCTCGGCAATCGATTACAGGACAAGTGCTGCCCCGGCGGCTCCGCGA
+
fa1_tss_region_5_000032444658_000032444913
chr5
32,444,658
32,444,913
tss_region
Hippopotamus amphibius
Hippopotamus_amphibius
GCA_004027065.1
9,833
Hippopotamidae
mammals
1
zoonomia_cactus
HipAmp_scaffold_7312
81,671
81,926
+
143,456
81,798
81,799
1
1
GCTGCCGCCGCCACCACGGCGGAGGACACCAGGCCCGCTTTCCCCGGCAGGCGCCCCGGCCCGCCTCGGCCGAGGCCCGGCACGCGCCCGCCGGAGCCGCGAAGGCGTCGGGACTACAGCTCCCAGGGTGCCGAGCGCGGGGGCGCCTGCGCAGTGCGGCGGGAGTCAGCGGTCTGTTCTCCGCTGAGGAGAAGAGGGGCAGAGGAGGGAGGCAGCGGGTGAGAGTTCAGAGTTCAGCAGCACCAGCCCGAGCCC
-
fa1_tss_region_11_000022666288_000022666543
chr11
22,666,288
22,666,543
tss_region
Indri indri
Indri_indri
GCA_004363605.1
34,827
Indriidae
mammals
1
zoonomia_cactus
k141_1425159
12,528
12,783
+
19,841
12,655
12,656
1
1
TGTTCAATTTGGAAGGAAGTGTGGCCGAAGTTACTGGAAAGCTCATGCCTGTCTGCAAAATCACTGGCCAGAAACGCAGAACTTTTCCAACACCCAATTTTAATATTGTGCTAAAGCCATTGACTCTGTTAAAACCCTGGAGTTAAATATGATCCCCTCCCCACCCCCATCCTTTCTCTCTTAGGTTCGTGTTTGGGGGACAAGGAGGGGGCTGGAACTTGGCCCCAACCTCAGAATTGCTGCCAAGGGCTTGTA
+
fa1_tss_region_5_000139294680_000139294935
chr5
139,294,680
139,294,935
tss_region
Craseonycteris thonglongyai
Craseonycteris_thonglongyai
GCA_004027555.1
208,972
Craseonycteridae
mammals
1
zoonomia_cactus
CraTho_scaffold_50772
21,448
21,703
-
23,083
21,575
21,576
1
1
CTAGGTTCCTCCTGAGAGGATCCTGTGGTGTGGGACCTTCCGGTTTCCAGACAAAGGGTTTGGAGTACCGTGGGGTAGTCGTCGCATCGTTGTTCTTTTCATGCGCTGTGCCGTAATTCTGTGTTCCACGGGGACTTTTCCCATTTACCGTGAAGGAGTATCTCCTTGGTGTTTGTACGGCTTTCTGGCCCTATTCTGTGGAATGTTCTTAGTGGGTCAATTACAGTTTTTCCAGCAAGATATTTTTAGAATGGT
+
fa1_tss_region_19_000007632764_000007633019
chr19
7,632,764
7,633,019
tss_region
Hydrochoerus hydrochaeris
Hydrochoerus_hydrochaeris
GCA_004027455.1
10,149
Hydrochaeridae
mammals
1
zoonomia_cactus
HydHyd_scaffold_9092
103,319
103,574
-
172,768
103,446
103,447
1
1
GAACAGCGCTGCTCCTCCATCCGGTCACCCTGCACGTGGCTCAGCAGGTTGAAGAAGCCCTCCTGGTCTGGCGAGCCTGCCTGGGGACAGGTACACTCGGTCTGTGCGGGGACTCCCCTCGGCCCTCCTTGGCAGTAGGCTACCACCCTCACCCTGGGGCAGTCCTCCAGCCCCCTTAGCTCTCACCATGGTCCTCGAGGATGTATCACTCTGCAGAGCTGCTTCAGAATGAGACCCGACCCTCCTTCCCAATCC
+
fa1_tss_region_9_000113536503_000113536758
chr9
113,536,503
113,536,758
tss_region
Pithecia pithecia
Pithecia_pithecia
GCA_004026645.1
43,777
Pitheciidae
mammals
1
zoonomia_cactus
tarseq_52
2,922,052
2,922,307
+
10,867,430
2,922,179
2,922,180
1
1
CTGTCCTGCAGCTCTTCACAGGCCTCTGCTGTGTTGGGAGCCACTGCCTCCCTCCCCTCCCCCAACCTGTGGGCCCACAGCTCTGCCAGCAGCTGGCCCCTGAACCCACTTCCCTGCGCCTCTGGCTGCCTCGATGTCACTGGGGATTAGTGTGCATTTGCGCTTTTGGCGGACACTCCCCTCCCGGCTGCAGCCTTGCCCTCTGGAGCCCAGGGATGGCTTGGGCCTGGGAGCCCCCTGAACCAGGGAGCAGCC
+
fa1_tss_region_3_000041195380_000041195635
chr3
41,195,380
41,195,635
tss_region
Castor canadensis
Castor_canadensis
GCA_004027675.1
51,338
Castoridae
mammals
1
zoonomia_cactus
CasCan_scaffold_19380
4,078
4,333
-
69,998
4,205
4,206
1
1
GCTGACAAGAACATGTCTGCTGCCTGCAGTTTCTGCAATAGCTCACCGTGTTGCCTACTAACCGAAAGATCAAAAATTATCGATTTCATGGCGCTGCGTGCTCTGGAAAGAAAAGCTACTTTAAAATTTGCATTGTTTAAGAAACGAGTTAAAAGAAAAGAATAATTTTTTTTTCTGAACTCTTTGGGATGTGAAAATGGCTTGTTTTAATCTTATCCATGATTTACTATAATTCTATTATTTTTAGCAGCTGGA
+
fa1_tss_region_10_000022714454_000022714709
chr10
22,714,454
22,714,709
tss_region
Mus musculus
Mus_musculus
GCF_000001635.26
10,090
Muridae
mammals
1
zoonomia_cactus
chr2
18,998,128
18,998,383
+
182,113,224
18,998,255
18,998,256
1
1
CGGAGCGCACAGAACAGCTTAACGGTCCGGCATCCGCATCCGCACCCGCCCCGCCCGTCGGCGCCGCTGCCCCGCCCGCCTCTGCGTCATGACGCTAGCGCCCAACGCGGAAGCCGCCCGCCGCCTGGACCAGCCGAGGGCTGTGCGCCGAGCCGCGACGGGCGGGAGCCGGCGGGGGCGCGAGGCGAGCGCAGCTGCAGCCTAAGCGGCCGAGCGCGCGGAGCGGGCGGAGCGAGCGCCCAGGACTGAGCGCGG
-
fa1_tss_region_11_000060902281_000060902536
chr11
60,902,281
60,902,536
tss_region
Ara macao
araMac1
SMACv1.1/araMac1
176,014
Psittacidae
birds
2
ucsc_multiz100way
KE025442
4,818
5,073
-
10,337
4,945
4,946
1
1
catcccgctcctctccttccctccctcctcctcccccgGCGGTCATCGGCCCTTTCCTGTGTGCCgtgcagggagctggggagcCCATGGAGCTGGGGGAGCTCGCAGGCATGACCCCCGAGATCATCCAGAAGGTAAAGCCGCTTCTCCTGCGCTCGTGGCCCTGGGAgccctcccccttcctcctggTCCCCCTCTGACCACGCTCCTCTTGCGCAGCTCCAAGACAAGGCCACGGTGCTCACCACGGAGCGT
-
fa1_tss_region_1_000044843188_000044843443
chr1
44,843,188
44,843,443
tss_region
Aotus nancymaae
Aotus_nancymaae
GCA_000952055.2
37,293
Aotidae
mammals
1
zoonomia_cactus
KZ201208.1
8,271,045
8,271,300
-
12,336,536
8,271,172
8,271,173
1
1
GGCCCCGGGGGCGGGAGGGAGGCGCGGGGTGGCCCAGCCTGGGTGGTCTCGAGCCCCGCCCCCTGCGGCGCCGTTACCTAGCAGCGGGTCCGGCCGCGCGGCTCGGGTAACTTGCAGGCCCCTCAGCCAATGGGAGGGCGTCGCCCCAGCCAGCTCCCTTTTTCTGGAGCTCCAGCCGCCTCTCGGGCACTCCGGTCTGCACCTCCAGCCCTGCTGGGCGTCTCCAGCCAGCAATTTTGCCTGCGCGCAGGACCC
-
fa1_tss_region_3_000008501458_000008501713
chr3
8,501,458
8,501,713
tss_region
Catagonus wagneri
Catagonus_wagneri
GCA_004024745.1
51,154
Tayassuidae
mammals
1
zoonomia_cactus
CatWag_scaffold_3872
45,032
45,287
+
193,600
45,159
45,160
1
1
TCCCCCCCTCCCTTTGGGTGGCCTGGGCCCAGCCGGGAGACTGCAGCAGAGTGAGCGATTCCCTGACGTCAGTGCGGCCGCGGCCCTAGCCTGCCCGGGCGGCGCACATCTGCCTTGGGGCGGCAGGAATCCGTCCCCACGCCCTTTTCCTTTAAAGGACAACGGGCAGAGGGGTGGAGCAGGCCTCGGGGCCCCGCGATCCATTCGGGTCAAAAGGGAGAGTGATCAAACGGCGAGGCTGGGGTATTTTTAGTG
-
fa1_tss_region_12_000113057561_000113057816
chr12
113,057,561
113,057,816
tss_region
Papio anubis
Papio_anubis
GCA_000264685.2
9,555
Cercopithecidae
mammals
1
zoonomia_cactus
CM001501.2
112,870,868
112,871,123
+
132,960,392
112,870,995
112,870,996
1
1
GCCGCACCCCTTCCTCGTGTGTTCTGCAGCCACCCAGGCCTTCCAGGACACCGTGGAGAGGGAACAAGGGGGCAGGGACGCCCCCTTCAGCAGGAGCCGTCGGAGAAGGGGGCCCGGACTGGAGGGAGGCAAGAAGCCCCACTGAAGCCAGGCGCAGGGTCTGGGACGCAGTTGGGAGTGCAGAGGGCTGACTGAGAGCCGCAGGAGCAGCAGGCTGTGGCCCAGGCCTCCTGGGTGACAGGCCCTGTCTGGCGG
+
fa1_tss_region_7_000139829125_000139829380
chr7
139,829,125
139,829,380
tss_region
Odobenus rosmarus
Odobenus_rosmarus
GCF_000321225.1
9,707
Odobenidae
mammals
1
zoonomia_cactus
KB229693.1
665,320
665,575
+
1,503,870
665,447
665,448
1
1
GTCTCTAGAAGGGCGATCCtccagaggaaagagggaggctGATCCCCCTGCTGTTACAGGGACCACGATCTGCAGATGGAAGAAGGATCAGGCAACCAAGACCACAACACGTCAAGTGGGTCCCCAAAATGTGCTCTCCGTCAGAGTGTCTCCttataaagaggaaggaagaggagggaaaaaacacAGGGTTTCAGCATAAGGCAATGAATCAGCAACTTTATTTTCTTGAGGACTGCActgtcaataaacatt
-
fa1_tss_region_3_000065478753_000065479008
chr3
65,478,753
65,479,008
tss_region
Loxodonta africana
Loxodonta_africana
GCF_030014295.1
9,785
Elephantidae
mammals
1
zoonomia_cactus
GL010039.1
818,897
819,152
-
65,937,429
819,024
819,025
1
1
AACAATACAGCTTTCCCTCTGCCTCTGAATTCACTGTCTAGCTGGGTAAGAAAGACATGTTTTCTAATGCATTCCAGAAATGGAATACAGTTTGTTCtggttttctagtttttttttttttaatgtgctaagAGATCTGGTTTTgaagtcttgaaaaaaaaaaagcacttttttttttttttttgaaacatgcGAATGTGTCTCCCCATCACCTAGGAAACTATTATGGGACACCCAGACCTCCTAGCCAGCCAG
-
fa1_tss_region_22_000031248357_000031248612
chr22
31,248,357
31,248,612
tss_region
Hydrochoerus hydrochaeris
Hydrochoerus_hydrochaeris
GCA_004027455.1
10,149
Hydrochaeridae
mammals
1
zoonomia_cactus
HydHyd_scaffold_4185
72,892
73,147
-
294,112
73,019
73,020
1
1
TGACAGCAGTGCTTCTTTTCTTAGCTAGCCACACACAGCCCCTGCCCAAGAATGCCTGTGTGTGTATAGTCTCCACAGAGAGGTGGTTCTCCCAGAGTCCTGAGGGGCCACCGGAGCTTCCAGGAACTAGGAAGGAACCGCCCCAGCCATGAGCCCCTGTGGTAATCTGCCAGGGGGCCAGTGGCCTGGAGTCCTCACCCTCCTCCTGCTGCTCCAGAGGGAGAGGTGAGCGGCGGGCAGCCCGCCCCCAGCCAG
+
fa1_tss_region_9_000079572284_000079572539
chr9
79,572,284
79,572,539
tss_region
Ateles geoffroyi
Ateles_geoffroyi_a
GCA_004024785.1
9,509
Atelidae
mammals
1
zoonomia_cactus
k141_702915
29,624
29,879
+
118,700
29,751
29,752
1
1
ACCTCTTCCGAACCAAAGGAGTTTGTGTTTGCTTTTAGGGAAGAAGAAAGATCATTCATTCGGAGGAATAACAACCAATTAAAAGACAAATAAAAAAAAGTTTGGAGTGGGACGCAGAGCGAGCGAGCAGCGCTGCCGGCGGGCGGTGGGGAGCGGAGCTCGCACTTCACCGGCCGGGTGAGCGGCGGCCGCGGCGCCGGGCTCGGCGGGTGCGCCTCGGCAAAGCGAACGTCGGAGCGTTGCCTCGGGAGACGC
+
fa1_tss_region_22_000050474768_000050475023
chr22
50,474,768
50,475,023
tss_region
Catagonus wagneri
Catagonus_wagneri
GCA_004024745.1
51,154
Tayassuidae
mammals
1
zoonomia_cactus
CatWag_scaffold_24742
10,424
10,679
-
61,512
10,551
10,552
1
1
GCGGCCGGGCGGGCCGGCTGGCTGGGAAGATGGCGGCGGGAGCCCTGGCCGCCGCCGCGGAGCGGGCCCGGGGCGTCCGGGGTGCGCGGGCCAGGGCCGGAGCCGGGCCATGAGCGCGCCGTCCTCGTATCCCCGAGCCGCGGAGCCCGCCCGCGCCCCTCGCCATGGCGCGGCTCGCGGACTACTTCGTGCTGGTGGCGTTCGGGCCGCACCCGCGCGGTGAGTGCCGTCGCGCGGCCGACGGCCGAGGGCTGG
-
fa1_tss_region_16_000048393827_000048394082
chr16
48,393,827
48,394,082
tss_region
Tragulus javanicus
Tragulus_javanicus
GCA_004024965.1
9,849
Tragulidae
mammals
1
zoonomia_cactus
TraJav_scaffold_14985
53,532
53,787
-
88,764
53,659
53,660
1
1
GTCCGTACCACTAAGGTTATTTGGATCACCGATGTTTAATTGGTCCCCCTTATCTAATGAAACCTGGCTATCAGAACCCTTTAAATCGCCATCTCCTGAGGGCTAGATATAGGCAGAGGGAGCTGCTTTGAGCCTGGAAGAGAAACAGCAGTGAGTCCCACAGAGAGATGACAAAGCTCGTCTGTACCGAACCTGCGAGACGGGGCTCGTGATGGAGGCGTGTTGCCAGTTGCATCAGAGCCTGATTCATGCCCG
+
fa1_tss_region_8_000144503845_000144504100
chr8
144,503,845
144,504,100
tss_region
Trichechus manatus
Trichechus_manatus
GCF_000243295.1
9,778
Trichechidae
mammals
1
zoonomia_cactus
JH594791.1
4,813,964
4,814,219
+
5,193,697
4,814,091
4,814,092
1
1
GGCCCCGCCCTACCCGCCtgggcacagttctgctccagGGAGCCAGAGGGAGTGGGTGAGGATGCAGGCGGGGCTTGGGTCGAGGCCGGGTGCCCGCCCAGTGTCCCCATGGCAGGGAAGCAGGAGACCCACAGTGGGGGGTTGGGACAGACAGATGATCAGGGATGGTACCGTTTGggaaaatctgagaagctgagtgCCTGGGAAGATGGAGGTCGCCTGGGCCCAGGGAGGCCTGAGGGGCTGGCAGAGCTG
-
fa1_tss_region_19_000044891080_000044891335
chr19
44,891,080
44,891,335
tss_region
Myotis lucifugus
Myotis_lucifugus
GCF_000147115.1
59,463
Vespertilionidae
mammals
1
zoonomia_cactus
GL430538.1
208,524
208,779
-
369,057
208,651
208,652
1
1
GCTTGCGAGTGGGAGCCAATAAAAAAGGGCGTTCCGAAGAAATGGGTGGGGTTCTCATCCATGGCTCCAATAGCAGGGCCAGGCCCTGAAGCTGGTGGGCGGACCCTAGGGCATGTTGAACCAATAGGCTAGGggaggcggggtgacggtggtggcggcggcggcagtgggttcggttgcgcgtggcgCACGGGGTGGGAGCGGAGCCCAGGCCGGGAACAGGCGCTGCCGCCAGTGAGAACCGGGGCCCTGAGC
+
fa1_tss_region_2_000219245282_000219245537
chr2
219,245,282
219,245,537
tss_region
Dinomys branickii
Dinomys_branickii
GCA_004027595.1
108,858
Dinomyidae
mammals
1
zoonomia_cactus
DinBra_scaffold_21976
6,811
7,066
+
67,575
6,938
6,939
1
1
TCCCCTTTGGCTCAAATGCCCGAGTTTTGACCTGTACTGAAGGCCTAGTTGAGAACCTTTACCCGGGTCCTGGGACAAGCCCACCTCTAGGTCTAGCCCGCCCCTAGTTTCTTCACTCTCCGCGCCCACATCTTCCAGCAGGCCAGCAGTTGCTAGGATACGGCGGGCCGTTACTCCGGCGCCGGATGATGACGCAACGTCTACTTCCGGTCCCCGGAGCGTCGCTTCGGTAGGAGCCAGGTCAGTGGGCTGTGC
+
fa1_tss_region_X_000047561053_000047561308
chrX
47,561,053
47,561,308
tss_region
Cavia porcellus
Cavia_porcellus
GCF_000151735.1
10,141
Caviidae
mammals
1
zoonomia_cactus
DS562987.1
1,105,628
1,105,883
+
3,160,145
1,105,755
1,105,756
1
1
TCCCTGCCCGTGTTCGCGTCCGCTCCAAAACCTGAACGCTACCGGACCCGCCCTTACCTGTCACACCGCTACAGCCTCCAGCGCCTCCATCTTGGGCCTGTCTTCTTGTTTCCTCACAGAGTCCACCTCCACCGCCCTTCGGACTTTGGCCATTGGCGCTGCAAGATTCAGTAGTCCATTCTTATTGGATTAAGGTCATGCCTGTCAAGACAGGACCAGCAGAATGTGTTCGTGTTCCGGATTAGCCGAGGCGGC
-
fa1_tss_region_13_000032031427_000032031682
chr13
32,031,427
32,031,682
tss_region
Platanista gangetica
Platanista_gangetica
GCA_054084255.1
118,798
Platanistidae
mammals
1
zoonomia_cactus
PlaMin_flattened_line_30426
14,569
14,824
+
36,716
14,696
14,697
1
1
GCAGATCTACCTCTGGCGCCGGCAGCAAGTCCTCATTTAAAGGACACGGAGGCGCCGGAGAGAGAGAGATGCTCGGCCGCTCCTCCTCCTTCGGGTCCAGAACTGGCTCCTTATTTGCTGGGGGCTGATCCCGAGCCCTGAGAGGCGGCGGCGGCCACTGCTTTCATTTCTGAGCTGCTATAACCAGCCACGCCCGCTGCCTGCCGCCCACAGGTTCGGCCCGGCAGGTACGGGACCGAGGAAGTCCCCACCTGC
-
fa1_tss_region_15_000091100773_000091101028
chr15
91,100,773
91,101,028
tss_region
Kogia breviceps
Kogia_breviceps
GCA_004363705.1
27,615
Physeteridae
mammals
1
zoonomia_cactus
KogBre_flattened_line_1564
20,354
20,609
-
126,022
20,481
20,482
1
1
TGGACAGCAGAGATATCTAACACCCGTCTGCGGAGGAAACGGCAGTGCCTCGCTCCTCCCTGGCTAAACGCATTTGCTCACCCGTCCCTGCAGAACAAATCATGTTCTTTTCCTTGCGCTAAAATCCCTCTATAAACAAATCCTCTCTGTGGCCCTAAGAAACGGCTCCCACACCCGCGGAGGGCGCCCTCCACATACAGAAATATACGCAAACCCCAACCCAGAGCCACCAGGTGTAAGCCTGGTTTGGATGTC
-
End of preview. Expand in Data Studio

marin-dna/functional-tss

Human-anchored 255 bp vertebrate sequences from the Zoonomia 447-mammal Cactus alignment and official version-matched UCSC hg38-to-target liftOver chains. This draft covers the tss_region region cohort with all species scope and preserves source FASTA/2bit letter case.

Non-human rows project only the central human nucleotide and extract the 255 bp target window centered on its unique mapped locus.

For the 28 non-mammalian targets, the stable ucsc_multiz100way alignment_source value identifies the pinned UCSC assembly cohort; the actual projection operation uses the matching checksum-pinned pairwise liftOver chain.

Anchor eligibility uses the pipeline's pinned phyloP conservation filter. Sequence case is independent of that filter: lowercase bases preserve source repeat masking, uppercase bases preserve source non-repeat-masked sequence, and conservation scores never rewrite emitted characters or case.

Produced by the commit-pinned vertebrate projection pipeline.

Human anchor provenance

Human anchors were constructed on GRCh38 from the complete Ensembl release 115 GTF with all qualifying transcripts; RefSeq and canonical-transcript-only filtering were not used. The enhancer input is ENCODE SCREEN Registry V4 dELS/pELS. The five disjoint classes use the base-priority order cds > utr3 > tss_region > ncrna > enhancer followed by the source-arm window-majority gate. The shared projection catalog requires at least 10% human bases above the pinned phyloP cutoff; this initial training dataset contains only the nested at-least-20% catalog. Projected 10–20% rows are excluded and retained as a separate producer artifact.

Coordinates and sequence semantics

Human source coordinates use GRCh38/hg38 primary chromosomes. All human and target coordinates are 0-based and half-open. Every emitted sequence is exactly 255 bases, preserves its source FASTA/2bit letter case, and is oriented to the human anchor.

The published format is zstd-compressed JSON Lines under data/train/ and data/validation/. The release is validated before upload against a producer-keyed manifest of file sizes and SHA-256 checksums, and the immutable Hub revision exposes each large-file SHA-256 identifier.

license: other preserves the source-specific terms of the public genome assemblies, annotations, and alignments rather than relicensing those inputs.

Splits

  • train: 7,577,794 rows after removing the validation sample and applying the configured reverse-complement augmentation.
  • validation: 16,384 original-orientation rows sampled uniformly without replacement with seed 517 before augmentation (4,194,304 tokens including BOS).

The split is row-level and does not stratify by chromosome, species, or human anchor. Different species projections from one human anchor may occur on opposite sides of the split. The reverse complement of a selected validation row is excluded from training.

The selected target manifest contains 135 family-deduplicated projection targets; human reference rows are added separately once per anchor.

Projection backend Clade Selected species
ucsc_multiz100way amphibians 1
ucsc_multiz100way birds 11
ucsc_multiz100way jawless_vertebrates 1
ucsc_multiz100way lobe-finned_fish 1
ucsc_multiz100way ray-finned_fish 9
ucsc_multiz100way reptiles 5
zoonomia_cactus mammals 107

Schema

  • query_name: String
  • source_chrom: String
  • source_start: Int64
  • source_end: Int64
  • region_label: String
  • species: String
  • alignment_name: String
  • assembly: String
  • taxonomy_id: Int64
  • family: String
  • clade: String
  • phylogenetic_rank: Int64
  • alignment_source: String
  • t_chrom: String
  • t_start: Int64
  • t_end: Int64
  • t_strand: String
  • t_src_size: Int64
  • pre_resize_t_start: Int64
  • pre_resize_t_end: Int64
  • fragment_count: Int64
  • aligned_bases: Int64
  • sequence: String
  • augmentation: String

Intended use and limitations

This dataset is intended for genomic language-model research and is not a clinical resource. Assembly quality, alignment gaps, repeat masking, family-deduplicated species selection, human conservation selection, and the center-nucleotide acceptance contract affect the observed sequence distribution. Projecting the center nucleotide does not establish that both 127 bp target flanks are homologous to the full human anchor.

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