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876d145
1
Parent(s):
dd74b32
Updated.
Browse files
app.py
CHANGED
@@ -3,7 +3,7 @@ import pandas as pd
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import faiss
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import numpy as np
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import torch
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from transformers import AutoTokenizer, AutoModelForCausalLM
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from sentence_transformers import SentenceTransformer
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# Load retrieval corpus & FAISS index
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@@ -12,14 +12,21 @@ index = faiss.read_index("faiss_index.bin")
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# Load embedding model
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embedding_model = SentenceTransformer("all-MiniLM-L6-v2")
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# Swap to BioMedLM 2.7B (CPU-friendly biomedical model)
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model_id = "stanford-crfm/BioMedLM"
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tokenizer = AutoTokenizer.from_pretrained(model_id)
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tokenizer.pad_token = tokenizer.eos_token
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generation_model = AutoModelForCausalLM.from_pretrained(
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def retrieve_top_k(query, k=5):
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query_embedding = embedding_model.encode([query]).astype("float32")
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import faiss
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import numpy as np
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import torch
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from transformers import AutoTokenizer, AutoModelForCausalLM, BitsAndBytesConfig
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from sentence_transformers import SentenceTransformer
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# Load retrieval corpus & FAISS index
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# Load embedding model
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embedding_model = SentenceTransformer("all-MiniLM-L6-v2")
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model_id = "stanford-crfm/BioMedLM"
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bnb_config = BitsAndBytesConfig(
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load_in_8bit=True,
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llm_int8_threshold=6.0,
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)
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tokenizer = AutoTokenizer.from_pretrained(model_id)
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tokenizer.pad_token = tokenizer.eos_token
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generation_model = AutoModelForCausalLM.from_pretrained(
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model_id,
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device_map="auto",
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quantization_config=bnb_config,
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)
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def retrieve_top_k(query, k=5):
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query_embedding = embedding_model.encode([query]).astype("float32")
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