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# genesis/api_clients/bioportal_api.py
import requests
import os
BIOPORTAL_API_KEY = os.getenv("BIOPORTAL_API_KEY")
BASE_URL = "https://data.bioontology.org"
def search_bioportal(query: str):
"""Search BioPortal for ontologies, classes, or terms."""
url = f"{BASE_URL}/search"
params = {"q": query, "apikey": BIOPORTAL_API_KEY}
r = requests.get(url, params=params)
r.raise_for_status()
return r.json()
def get_ontology_list():
"""Get list of available ontologies."""
url = f"{BASE_URL}/ontologies"
params = {"apikey": BIOPORTAL_API_KEY}
r = requests.get(url, params=params)
r.raise_for_status()
return r.json()
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