utils/api_integrations.py

# genesis/utils/api_helpers.py
from genesis.api_clients import chembl_api, pubmed_api, bioportal_api, umls_api, ncbi_api

def get_molecule_info(query):
    return {
        "search": chembl_api.search_molecule(query),
        "details": chembl_api.get_molecule_details(query)
    }

def get_pubmed_articles(query):
    search = pubmed_api.search_pubmed(query)
    ids = search.get("esearchresult", {}).get("idlist", [])
    details = pubmed_api.fetch_pubmed_details(ids) if ids else None
    return {"search": search, "details": details}

def get_bioportal_results(query):
    return bioportal_api.search_bioportal(query)

def get_umls_results(query):
    return umls_api.search_umls(query)

def get_ncbi_gene(query):
    return ncbi_api.search_gene(query)