ColiFormer / requirements.txt
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Add ColiFormer Streamlit app for Hugging Face Spaces
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streamlit>=1.28.0
torch>=1.13.0
pandas>=1.5.0
numpy>=1.21.0
plotly>=5.0.0
transformers>=4.21.0
scipy>=1.9.0
tokenizers>=0.13.0
tqdm>=4.64.0
matplotlib>=3.5.0
seaborn>=0.11.0
onnxruntime>=1.15.0
python-codon-tables>=0.1.12
biopython>=1.79
scikit-learn>=1.0.0
requests>=2.25.0
ipywidgets>=7.6.0
huggingface-hub>=0.20.0
datasets>=2.0.0
git+https://github.com/Benjamin-Lee/CodonAdaptationIndex.git