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f448cb0c_t__PDPK1_013__ENST00000441549___Flags
|
[Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
f448cb0c_t__PDPK1_013__ENST00000441549___Flags
|
[Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
f448cb0c_t__PDPK1_013__ENST00000441549___Flags
|
[Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
f448cb0c_t__PDPK1_013__ENST00000441549___Flags
|
[Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-001 [Transcript ID] ENST00000342085 [bp] 7241 [Protein] 556aa [Translation ID] ENSP00000344220 [CCDS] CCDS10472 [UniProt] O15530 [RefSeq] NM_002613 NP_002604 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-002 [Transcript ID] ENST00000268673 [bp] 4728 [Protein] 429aa [Translation ID] ENSP00000268673 [CCDS] CCDS10473 [UniProt] O15530 [RefSeq] NM_031268 NP_112558 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-013 [Transcript ID] ENST00000441549 [bp] 1729 [Protein] 454aa [Translation ID] ENSP00000395357 [CCDS] CCDS58411 [UniProt] O15530 [RefSeq] NM_001261816 NP_001248745 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-003 [Transcript ID] ENST00000389224 [bp] 2416 [Protein] 529aa [Translation ID] ENSP00000373876 [CCDS] - [UniProt] E9PER6 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-008 [Transcript ID] ENST00000461815 [bp] 611 [Protein] 149aa [Translation ID] ENSP00000455551 [CCDS] - [UniProt] H3BQ10 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-006 [Transcript ID] ENST00000474706 [bp] 699 [Protein] 35aa [Translation ID] ENSP00000455025 [CCDS] - [UniProt] H3BNV5 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-007 [Transcript ID] ENST00000492021 [bp] 552 [Protein] 55aa [Translation ID] ENSP00000455684 [CCDS] - [UniProt] H3BQA3 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-012 [Transcript ID] ENST00000478708 [bp] 445 [Protein] 40aa [Translation ID] ENSP00000455438 [CCDS] - [UniProt] H3BPR5 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-011 [Transcript ID] ENST00000471311 [bp] 621 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-017 [Transcript ID] ENST00000561962 [bp] 570 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-009 [Transcript ID] ENST00000460496 [bp] 569 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-016 [Transcript ID] ENST00000462923 [bp] 550 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
35ada938_t__PDPK1_013__ENST00000441549___Biotype
|
[Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Oligo probes - Transcript: PDPK1-013 (ENST00000441549)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Oligos?db=core;g=ENSG00000140992;r=16:2587965-2653189;t=ENST00000441549
|
5/1438042988718.8_20150728002308-00235-ip-10-236-191-2_426152048_0.json
|
6718cb9e__MAP3K13_010__ENST00000447637___Biotype
|
[Name] MAP3K13-001 [Transcript ID] ENST00000265026 [bp] 9876 [Protein] 966aa [Translation ID] ENSP00000265026 [CCDS] CCDS3270 [UniProt] O43283 [RefSeq] NM_004721 NP_004712 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAP3K13-010 (ENST00000447637)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000073803;r=3:185282961-185428920;t=ENST00000447637
|
5/1438042988718.8_20150728002308-00006-ip-10-236-191-2_424709055_0.json
|
6718cb9e__MAP3K13_010__ENST00000447637___Biotype
|
[Name] MAP3K13-003 [Transcript ID] ENST00000424227 [bp] 3156 [Protein] 966aa [Translation ID] ENSP00000399910 [CCDS] CCDS3270 [UniProt] O43283 [RefSeq] NM_001242314 NP_001229243 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
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Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAP3K13-010 (ENST00000447637)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000073803;r=3:185282961-185428920;t=ENST00000447637
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5/1438042988718.8_20150728002308-00006-ip-10-236-191-2_424709055_0.json
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6718cb9e__MAP3K13_010__ENST00000447637___Biotype
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[Name] MAP3K13-004 [Transcript ID] ENST00000446828 [bp] 2737 [Protein] 759aa [Translation ID] ENSP00000411483 [CCDS] CCDS56298 [UniProt] O43283 [RefSeq] NM_001242317 NP_001229246 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
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Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAP3K13-010 (ENST00000447637)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000073803;r=3:185282961-185428920;t=ENST00000447637
|
5/1438042988718.8_20150728002308-00006-ip-10-236-191-2_424709055_0.json
|
6718cb9e__MAP3K13_010__ENST00000447637___Biotype
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[Name] MAP3K13-006 [Transcript ID] ENST00000443863 [bp] 3025 [Protein] 822aa [Translation ID] ENSP00000409325 [CCDS] - [UniProt] O43283 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAP3K13-010 (ENST00000447637)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000073803;r=3:185282961-185428920;t=ENST00000447637
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5/1438042988718.8_20150728002308-00006-ip-10-236-191-2_424709055_0.json
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6718cb9e__MAP3K13_010__ENST00000447637___Biotype
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[Name] MAP3K13-005 [Transcript ID] ENST00000448876 [bp] 1681 [Protein] 40aa [Translation ID] ENSP00000392223 [CCDS] - [UniProt] C9IYH2 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAP3K13-010 (ENST00000447637)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000073803;r=3:185282961-185428920;t=ENST00000447637
|
5/1438042988718.8_20150728002308-00006-ip-10-236-191-2_424709055_0.json
|
6718cb9e__MAP3K13_010__ENST00000447637___Biotype
|
[Name] MAP3K13-013 [Transcript ID] ENST00000420577 [bp] 740 [Protein] 246aa [Translation ID] ENSP00000415712 [CCDS] - [UniProt] H7C459 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAP3K13-010 (ENST00000447637)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000073803;r=3:185282961-185428920;t=ENST00000447637
|
5/1438042988718.8_20150728002308-00006-ip-10-236-191-2_424709055_0.json
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6718cb9e__MAP3K13_010__ENST00000447637___Biotype
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[Name] MAP3K13-010 [Transcript ID] ENST00000447637 [bp] 618 [Protein] 113aa [Translation ID] ENSP00000389495 [CCDS] - [UniProt] C9JP65 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAP3K13-010 (ENST00000447637)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000073803;r=3:185282961-185428920;t=ENST00000447637
|
5/1438042988718.8_20150728002308-00006-ip-10-236-191-2_424709055_0.json
|
6718cb9e__MAP3K13_010__ENST00000447637___Biotype
|
[Name] MAP3K13-012 [Transcript ID] ENST00000428617 [bp] 573 [Protein] 137aa [Translation ID] ENSP00000405163 [CCDS] - [UniProt] C9J4W2 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAP3K13-010 (ENST00000447637)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000073803;r=3:185282961-185428920;t=ENST00000447637
|
5/1438042988718.8_20150728002308-00006-ip-10-236-191-2_424709055_0.json
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6718cb9e__MAP3K13_010__ENST00000447637___Biotype
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[Name] MAP3K13-011 [Transcript ID] ENST00000454237 [bp] 526 [Protein] 40aa [Translation ID] ENSP00000412037 [CCDS] - [UniProt] C9IYH2 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAP3K13-010 (ENST00000447637)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000073803;r=3:185282961-185428920;t=ENST00000447637
|
5/1438042988718.8_20150728002308-00006-ip-10-236-191-2_424709055_0.json
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6718cb9e__MAP3K13_010__ENST00000447637___Biotype
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[Name] MAP3K13-014 [Transcript ID] ENST00000438798 [bp] 388 [Protein] 40aa [Translation ID] ENSP00000390323 [CCDS] - [UniProt] C9IYH2 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAP3K13-010 (ENST00000447637)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000073803;r=3:185282961-185428920;t=ENST00000447637
|
5/1438042988718.8_20150728002308-00006-ip-10-236-191-2_424709055_0.json
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6718cb9e__MAP3K13_010__ENST00000447637___Biotype
|
[Name] MAP3K13-002 [Transcript ID] ENST00000438053 [bp] 2882 [Protein] 160aa [Translation ID] ENSP00000403561 [CCDS] - [UniProt] O43283 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAP3K13-010 (ENST00000447637)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000073803;r=3:185282961-185428920;t=ENST00000447637
|
5/1438042988718.8_20150728002308-00006-ip-10-236-191-2_424709055_0.json
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6718cb9e__MAP3K13_010__ENST00000447637___Biotype
|
[Name] MAP3K13-008 [Transcript ID] ENST00000433092 [bp] 1460 [Protein] 128aa [Translation ID] ENSP00000389798 [CCDS] - [UniProt] O43283 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAP3K13-010 (ENST00000447637)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000073803;r=3:185282961-185428920;t=ENST00000447637
|
5/1438042988718.8_20150728002308-00006-ip-10-236-191-2_424709055_0.json
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6718cb9e__MAP3K13_010__ENST00000447637___Biotype
|
[Name] MAP3K13-009 [Transcript ID] ENST00000455188 [bp] 982 [Protein] 40aa [Translation ID] ENSP00000405233 [CCDS] - [UniProt] C9IYH2 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAP3K13-010 (ENST00000447637)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000073803;r=3:185282961-185428920;t=ENST00000447637
|
5/1438042988718.8_20150728002308-00006-ip-10-236-191-2_424709055_0.json
|
6718cb9e__MAP3K13_010__ENST00000447637___Biotype
|
[Name] MAP3K13-007 [Transcript ID] ENST00000439882 [bp] 911 [Protein] 194aa [Translation ID] ENSP00000407361 [CCDS] - [UniProt] F8WF41 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAP3K13-010 (ENST00000447637)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000073803;r=3:185282961-185428920;t=ENST00000447637
|
5/1438042988718.8_20150728002308-00006-ip-10-236-191-2_424709055_0.json
|
6718cb9e__MAP3K13_010__ENST00000447637___Biotype
|
[Name] MAP3K13-015 [Transcript ID] ENST00000477582 [bp] 447 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAP3K13-010 (ENST00000447637)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000073803;r=3:185282961-185428920;t=ENST00000447637
|
5/1438042988718.8_20150728002308-00006-ip-10-236-191-2_424709055_0.json
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6c8f53c8__ATP13A2_010__ENST00000509619___Flags
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[Name] ATP13A2-005 [Transcript ID] ENST00000452699 [bp] 3981 [Protein] 1175aa [Translation ID] ENSP00000413307 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS44073 [UniProt] Q9NQ11 [RefSeq] NM_001141973 NP_001135445 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
6c8f53c8__ATP13A2_010__ENST00000509619___Flags
|
[Name] ATP13A2-001 [Transcript ID] ENST00000326735 [bp] 3840 [Protein] 1180aa [Translation ID] ENSP00000327214 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS175 [UniProt] Q9NQ11 [RefSeq] NM_022089 NP_071372 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
6c8f53c8__ATP13A2_010__ENST00000509619___Flags
|
[Name] ATP13A2-002 [Transcript ID] ENST00000341676 [bp] 3681 [Protein] 1158aa [Translation ID] ENSP00000341115 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS44072 [UniProt] Q9NQ11 [RefSeq] NM_001141974 NP_001135446 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
6c8f53c8__ATP13A2_010__ENST00000509619___Flags
|
[Name] ATP13A2-201 [Transcript ID] ENST00000617114 [bp] 1723 [Protein] 228aa [Translation ID] ENSP00000478781 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WUM9 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
6c8f53c8__ATP13A2_010__ENST00000509619___Flags
|
[Name] ATP13A2-007 [Transcript ID] ENST00000502418 [bp] 1201 [Protein] 398aa [Translation ID] ENSP00000423065 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0Y953 [RefSeq] - [Flags]
|
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
6c8f53c8__ATP13A2_010__ENST00000509619___Flags
|
[Name] ATP13A2-009 [Transcript ID] ENST00000510069 [bp] 962 [Protein] 321aa [Translation ID] ENSP00000424313 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0Y9K0 [RefSeq] - [Flags]
|
5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
6c8f53c8__ATP13A2_010__ENST00000509619___Flags
|
[Name] ATP13A2-014 [Transcript ID] ENST00000503552 [bp] 774 [Protein] 258aa [Translation ID] ENSP00000421126 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0Y8I1 [RefSeq] - [Flags]
|
5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
6c8f53c8__ATP13A2_010__ENST00000509619___Flags
|
[Name] ATP13A2-012 [Transcript ID] ENST00000506174 [bp] 573 [Protein] 191aa [Translation ID] ENSP00000424393 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0Y9K4 [RefSeq] - [Flags]
|
5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
6c8f53c8__ATP13A2_010__ENST00000509619___Flags
|
[Name] ATP13A2-010 [Transcript ID] ENST00000509619 [bp] 570 [Protein] 191aa [Translation ID] ENSP00000422668 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0Y8Z6 [RefSeq] - [Flags]
|
5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
6c8f53c8__ATP13A2_010__ENST00000509619___Flags
|
[Name] ATP13A2-011 [Transcript ID] ENST00000511957 [bp] 569 [Protein] 190aa [Translation ID] ENSP00000427241 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0YAI7 [RefSeq] - [Flags]
|
5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
6c8f53c8__ATP13A2_010__ENST00000509619___Flags
|
[Name] ATP13A2-008 [Transcript ID] ENST00000508222 [bp] 562 [Protein] 188aa [Translation ID] ENSP00000422227 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0Y8V5 [RefSeq] - [Flags]
|
5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
6c8f53c8__ATP13A2_010__ENST00000509619___Flags
|
[Name] ATP13A2-004 [Transcript ID] ENST00000466561 [bp] 1851 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
6c8f53c8__ATP13A2_010__ENST00000509619___Flags
|
[Name] ATP13A2-003 [Transcript ID] ENST00000463860 [bp] 1639 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
6c8f53c8__ATP13A2_010__ENST00000509619___Flags
|
[Name] ATP13A2-006 [Transcript ID] ENST00000502860 [bp] 687 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
6c8f53c8__ATP13A2_010__ENST00000509619___Flags
|
[Name] ATP13A2-013 [Transcript ID] ENST00000509392 [bp] 572 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
6e0425eb_e__Slc7a9__ENSMUSG00000030492___RefSeq
|
[Name] Slc7a9-001 [Transcript ID] ENSMUST00000032703 [bp] 1940 [Protein] 487aa [Translation ID] ENSMUSP00000032703 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS21150 [UniProt] Q3UQE3 Q9QXA6 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [RefSeq]
|
NM_021291 NP_067266
|
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Ensembl genome browser 81: Mus musculus - Summary - Gene: Slc7a9 (ENSMUSG00000030492)
|
RefSeq
|
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000030492;r=7:35449037-35466036
|
5/1438042987135.9_20150728002307-00211-ip-10-236-191-2_430743583_0.json
|
6e0425eb_e__Slc7a9__ENSMUSG00000030492___RefSeq
|
[Name] Slc7a9-002 [Transcript ID] ENSMUST00000118383 [bp] 1859 [Protein] 487aa [Translation ID] ENSMUSP00000113181 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS21150 [UniProt] Q3UQE3 Q9QXA6 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [RefSeq]
|
NM_001199015 NP_001185944
|
[
[
"N",
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"0",
"2",
"1",
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"1",
" ",
"N",
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[
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],
[
"-"
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] |
Ensembl genome browser 81: Mus musculus - Summary - Gene: Slc7a9 (ENSMUSG00000030492)
|
RefSeq
|
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000030492;r=7:35449037-35466036
|
5/1438042987135.9_20150728002307-00211-ip-10-236-191-2_430743583_0.json
|
6e0425eb_e__Slc7a9__ENSMUSG00000030492___RefSeq
|
[Name] Slc7a9-004 [Transcript ID] ENSMUST00000118969 [bp] 1765 [Protein] 487aa [Translation ID] ENSMUSP00000112726 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS21150 [UniProt] Q3UQE3 Q9QXA6 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [RefSeq]
|
NM_001199016 NP_001185945
|
[
[
"N",
"M",
"_",
"0",
"2",
"1",
"2",
"9",
"1",
" ",
"N",
"P",
"_",
"0",
"6",
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[
"N",
"M",
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"0",
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"9",
"0",
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"N",
"P",
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"0",
"0",
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[
"N",
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"1",
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"5",
"9",
"4",
"5"
],
[
"-"
]
] |
Ensembl genome browser 81: Mus musculus - Summary - Gene: Slc7a9 (ENSMUSG00000030492)
|
RefSeq
|
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000030492;r=7:35449037-35466036
|
5/1438042987135.9_20150728002307-00211-ip-10-236-191-2_430743583_0.json
|
6e0425eb_e__Slc7a9__ENSMUSG00000030492___RefSeq
|
[Name] Slc7a9-006 [Transcript ID] ENSMUST00000141245 [bp] 536 [Protein] 27aa [Translation ID] ENSMUSP00000117352 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] F7AUJ6 [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [RefSeq]
|
-
|
[
[
"N",
"M",
"_",
"0",
"2",
"1",
"2",
"9",
"1",
" ",
"N",
"P",
"_",
"0",
"6",
"7",
"2",
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"6"
],
[
"N",
"M",
"_",
"0",
"0",
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"1",
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"9",
"0",
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"N",
"P",
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"0",
"0",
"1",
"1",
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[
"N",
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"9",
"4",
"5"
],
[
"-"
]
] |
Ensembl genome browser 81: Mus musculus - Summary - Gene: Slc7a9 (ENSMUSG00000030492)
|
RefSeq
|
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000030492;r=7:35449037-35466036
|
5/1438042987135.9_20150728002307-00211-ip-10-236-191-2_430743583_0.json
|
6e0425eb_e__Slc7a9__ENSMUSG00000030492___RefSeq
|
[Name] Slc7a9-003 [Transcript ID] ENSMUST00000147026 [bp] 2086 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [RefSeq]
|
-
|
[
[
"N",
"M",
"_",
"0",
"2",
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"9",
"1",
" ",
"N",
"P",
"_",
"0",
"6",
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"2",
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"6"
],
[
"N",
"M",
"_",
"0",
"0",
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"9",
"0",
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"N",
"P",
"_",
"0",
"0",
"1",
"1",
"8",
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"9",
"4",
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[
"N",
"M",
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"N",
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"_",
"0",
"0",
"1",
"1",
"8",
"5",
"9",
"4",
"5"
],
[
"-"
]
] |
Ensembl genome browser 81: Mus musculus - Summary - Gene: Slc7a9 (ENSMUSG00000030492)
|
RefSeq
|
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000030492;r=7:35449037-35466036
|
5/1438042987135.9_20150728002307-00211-ip-10-236-191-2_430743583_0.json
|
6e0425eb_e__Slc7a9__ENSMUSG00000030492___RefSeq
|
[Name] Slc7a9-005 [Transcript ID] ENSMUST00000141905 [bp] 370 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [RefSeq]
|
-
|
[
[
"N",
"M",
"_",
"0",
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"9",
"1",
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"N",
"P",
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],
[
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[
"N",
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"4",
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],
[
"-"
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] |
Ensembl genome browser 81: Mus musculus - Summary - Gene: Slc7a9 (ENSMUSG00000030492)
|
RefSeq
|
http://www.ensembl.org/Mus_musculus/Gene/Summary?g=ENSMUSG00000030492;r=7:35449037-35466036
|
5/1438042987135.9_20150728002307-00211-ip-10-236-191-2_430743583_0.json
|
39e0317f__ATP13A2_010__ENST00000509619___Biotype
|
[Name] ATP13A2-005 [Transcript ID] ENST00000452699 [bp] 3981 [Protein] 1175aa [Translation ID] ENSP00000413307 [CCDS] CCDS44073 [UniProt] Q9NQ11 [RefSeq] NM_001141973 NP_001135445 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
39e0317f__ATP13A2_010__ENST00000509619___Biotype
|
[Name] ATP13A2-001 [Transcript ID] ENST00000326735 [bp] 3840 [Protein] 1180aa [Translation ID] ENSP00000327214 [CCDS] CCDS175 [UniProt] Q9NQ11 [RefSeq] NM_022089 NP_071372 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
39e0317f__ATP13A2_010__ENST00000509619___Biotype
|
[Name] ATP13A2-002 [Transcript ID] ENST00000341676 [bp] 3681 [Protein] 1158aa [Translation ID] ENSP00000341115 [CCDS] CCDS44072 [UniProt] Q9NQ11 [RefSeq] NM_001141974 NP_001135446 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
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5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
39e0317f__ATP13A2_010__ENST00000509619___Biotype
|
[Name] ATP13A2-201 [Transcript ID] ENST00000617114 [bp] 1723 [Protein] 228aa [Translation ID] ENSP00000478781 [CCDS] - [UniProt] A0A087WUM9 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
39e0317f__ATP13A2_010__ENST00000509619___Biotype
|
[Name] ATP13A2-007 [Transcript ID] ENST00000502418 [bp] 1201 [Protein] 398aa [Translation ID] ENSP00000423065 [CCDS] - [UniProt] H0Y953 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
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39e0317f__ATP13A2_010__ENST00000509619___Biotype
|
[Name] ATP13A2-009 [Transcript ID] ENST00000510069 [bp] 962 [Protein] 321aa [Translation ID] ENSP00000424313 [CCDS] - [UniProt] H0Y9K0 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
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5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
39e0317f__ATP13A2_010__ENST00000509619___Biotype
|
[Name] ATP13A2-014 [Transcript ID] ENST00000503552 [bp] 774 [Protein] 258aa [Translation ID] ENSP00000421126 [CCDS] - [UniProt] H0Y8I1 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
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39e0317f__ATP13A2_010__ENST00000509619___Biotype
|
[Name] ATP13A2-012 [Transcript ID] ENST00000506174 [bp] 573 [Protein] 191aa [Translation ID] ENSP00000424393 [CCDS] - [UniProt] H0Y9K4 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
39e0317f__ATP13A2_010__ENST00000509619___Biotype
|
[Name] ATP13A2-010 [Transcript ID] ENST00000509619 [bp] 570 [Protein] 191aa [Translation ID] ENSP00000422668 [CCDS] - [UniProt] H0Y8Z6 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
39e0317f__ATP13A2_010__ENST00000509619___Biotype
|
[Name] ATP13A2-011 [Transcript ID] ENST00000511957 [bp] 569 [Protein] 190aa [Translation ID] ENSP00000427241 [CCDS] - [UniProt] H0YAI7 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
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39e0317f__ATP13A2_010__ENST00000509619___Biotype
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[Name] ATP13A2-008 [Transcript ID] ENST00000508222 [bp] 562 [Protein] 188aa [Translation ID] ENSP00000422227 [CCDS] - [UniProt] H0Y8V5 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
39e0317f__ATP13A2_010__ENST00000509619___Biotype
|
[Name] ATP13A2-004 [Transcript ID] ENST00000466561 [bp] 1851 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
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39e0317f__ATP13A2_010__ENST00000509619___Biotype
|
[Name] ATP13A2-003 [Transcript ID] ENST00000463860 [bp] 1639 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
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39e0317f__ATP13A2_010__ENST00000509619___Biotype
|
[Name] ATP13A2-006 [Transcript ID] ENST00000502860 [bp] 687 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
39e0317f__ATP13A2_010__ENST00000509619___Biotype
|
[Name] ATP13A2-013 [Transcript ID] ENST00000509392 [bp] 572 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: ATP13A2-010 (ENST00000509619)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000159363;r=1:17312453-17338267;t=ENST00000509619
|
5/1438042988718.8_20150728002308-00165-ip-10-236-191-2_436976404_0.json
|
fcf5a46c_t__PARK2_002__ENST00000366892___Flags
|
[Name] PARK2-004 [Transcript ID] ENST00000366898 [bp] 4180 [Protein] 465aa [Translation ID] ENSP00000355865 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS5281 [UniProt] O60260 X5DR79 [RefSeq] NM_004562 NP_004553 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein sequence - Transcript: PARK2-002 (ENST00000366892)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_Protein?db=core;g=ENSG00000185345;r=6:161966144-163148796;t=ENST00000366892
|
5/1438042987135.9_20150728002307-00248-ip-10-236-191-2_421390033_0.json
|
fcf5a46c_t__PARK2_002__ENST00000366892___Flags
|
[Name] PARK2-005 [Transcript ID] ENST00000366897 [bp] 2877 [Protein] 437aa [Translation ID] ENSP00000355863 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS5282 [UniProt] O60260 [RefSeq] NM_013987 NP_054642 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein sequence - Transcript: PARK2-002 (ENST00000366892)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_Protein?db=core;g=ENSG00000185345;r=6:161966144-163148796;t=ENST00000366892
|
5/1438042987135.9_20150728002307-00248-ip-10-236-191-2_421390033_0.json
|
fcf5a46c_t__PARK2_002__ENST00000366892___Flags
|
[Name] PARK2-006 [Transcript ID] ENST00000366896 [bp] 2514 [Protein] 316aa [Translation ID] ENSP00000355862 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS5283 [UniProt] O60260 [RefSeq] NM_013988 NP_054643 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein sequence - Transcript: PARK2-002 (ENST00000366892)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_Protein?db=core;g=ENSG00000185345;r=6:161966144-163148796;t=ENST00000366892
|
5/1438042987135.9_20150728002307-00248-ip-10-236-191-2_421390033_0.json
|
fcf5a46c_t__PARK2_002__ENST00000366892___Flags
|
[Name] PARK2-002 [Transcript ID] ENST00000366892 [bp] 1505 [Protein] 368aa [Translation ID] ENSP00000355858 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] B1AKC3 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein sequence - Transcript: PARK2-002 (ENST00000366892)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_Protein?db=core;g=ENSG00000185345;r=6:161966144-163148796;t=ENST00000366892
|
5/1438042987135.9_20150728002307-00248-ip-10-236-191-2_421390033_0.json
|
fcf5a46c_t__PARK2_002__ENST00000366892___Flags
|
[Name] PARK2-003 [Transcript ID] ENST00000338468 [bp] 1276 [Protein] 274aa [Translation ID] ENSP00000343589 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] O60260 [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein sequence - Transcript: PARK2-002 (ENST00000366892)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_Protein?db=core;g=ENSG00000185345;r=6:161966144-163148796;t=ENST00000366892
|
5/1438042987135.9_20150728002307-00248-ip-10-236-191-2_421390033_0.json
|
fcf5a46c_t__PARK2_002__ENST00000366892___Flags
|
[Name] PARK2-001 [Transcript ID] ENST00000366894 [bp] 1157 [Protein] 274aa [Translation ID] ENSP00000355860 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] O60260 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein sequence - Transcript: PARK2-002 (ENST00000366892)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_Protein?db=core;g=ENSG00000185345;r=6:161966144-163148796;t=ENST00000366892
|
5/1438042987135.9_20150728002307-00248-ip-10-236-191-2_421390033_0.json
|
fcf5a46c_t__PARK2_002__ENST00000366892___Flags
|
[Name] PARK2-203 [Transcript ID] ENST00000612540 [bp] 603 [Protein] 201aa [Translation ID] ENSP00000478353 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WU39 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein sequence - Transcript: PARK2-002 (ENST00000366892)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_Protein?db=core;g=ENSG00000185345;r=6:161966144-163148796;t=ENST00000366892
|
5/1438042987135.9_20150728002307-00248-ip-10-236-191-2_421390033_0.json
|
fcf5a46c_t__PARK2_002__ENST00000366892___Flags
|
[Name] PARK2-201 [Transcript ID] ENST00000610470 [bp] 531 [Protein] 176aa [Translation ID] ENSP00000483773 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087X0Z9 [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein sequence - Transcript: PARK2-002 (ENST00000366892)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_Protein?db=core;g=ENSG00000185345;r=6:161966144-163148796;t=ENST00000366892
|
5/1438042987135.9_20150728002307-00248-ip-10-236-191-2_421390033_0.json
|
fcf5a46c_t__PARK2_002__ENST00000366892___Flags
|
[Name] PARK2-204 [Transcript ID] ENST00000615065 [bp] 261 [Protein] 87aa [Translation ID] ENSP00000484112 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087X1E2 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein sequence - Transcript: PARK2-002 (ENST00000366892)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_Protein?db=core;g=ENSG00000185345;r=6:161966144-163148796;t=ENST00000366892
|
5/1438042987135.9_20150728002307-00248-ip-10-236-191-2_421390033_0.json
|
fcf5a46c_t__PARK2_002__ENST00000366892___Flags
|
[Name] PARK2-202 [Transcript ID] ENST00000612485 [bp] 225 [Protein] 74aa [Translation ID] ENSP00000480716 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WX46 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein sequence - Transcript: PARK2-002 (ENST00000366892)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_Protein?db=core;g=ENSG00000185345;r=6:161966144-163148796;t=ENST00000366892
|
5/1438042987135.9_20150728002307-00248-ip-10-236-191-2_421390033_0.json
|
fcf5a46c_t__PARK2_002__ENST00000366892___Flags
|
[Name] PARK2-007 [Transcript ID] ENST00000479615 [bp] 904 [Protein] 218aa [Translation ID] ENSP00000434414 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] O60260 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein sequence - Transcript: PARK2-002 (ENST00000366892)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_Protein?db=core;g=ENSG00000185345;r=6:161966144-163148796;t=ENST00000366892
|
5/1438042987135.9_20150728002307-00248-ip-10-236-191-2_421390033_0.json
|
92e2a1fc_pt__PIGT_005__ENST00000372689___UniProt
|
[Name] PIGT-001 [Transcript ID] ENST00000279036 [bp] 2235 [Protein] 578aa [Translation ID] ENSP00000279036 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS13353 [RefSeq] NM_015937 NP_057021 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [UniProt]
|
Q969N2
|
[
[
"Q",
"9",
"6",
"9",
"N",
"2"
],
[
"F",
"6",
"W",
"9",
"8",
"3"
],
[
"H",
"7",
"C",
"2",
"Y",
"2"
],
[
"B",
"7",
"Z",
"7",
"C",
"5"
]
] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PIGT-005 (ENST00000372689)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000124155;r=20:45416137-45426241;t=ENST00000372689
|
5/1438042988718.8_20150728002308-00185-ip-10-236-191-2_430152116_0.json
|
92e2a1fc_pt__PIGT_005__ENST00000372689___UniProt
|
[Name] PIGT-007 [Transcript ID] ENST00000543458 [bp] 2000 [Protein] 522aa [Translation ID] ENSP00000441577 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS54464 [RefSeq] NM_001184728 NP_001171657 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [UniProt]
|
Q969N2
|
[
[
"Q",
"9",
"6",
"9",
"N",
"2"
],
[
"F",
"6",
"W",
"9",
"8",
"3"
],
[
"H",
"7",
"C",
"2",
"Y",
"2"
],
[
"B",
"7",
"Z",
"7",
"C",
"5"
]
] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PIGT-005 (ENST00000372689)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000124155;r=20:45416137-45426241;t=ENST00000372689
|
5/1438042988718.8_20150728002308-00185-ip-10-236-191-2_430152116_0.json
|
92e2a1fc_pt__PIGT_005__ENST00000372689___UniProt
|
[Name] PIGT-005 [Transcript ID] ENST00000372689 [bp] 1971 [Protein] 511aa [Translation ID] ENSP00000361774 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS54465 [RefSeq] NM_001184729 NP_001171658 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [UniProt]
|
Q969N2
|
[
[
"Q",
"9",
"6",
"9",
"N",
"2"
],
[
"F",
"6",
"W",
"9",
"8",
"3"
],
[
"H",
"7",
"C",
"2",
"Y",
"2"
],
[
"B",
"7",
"Z",
"7",
"C",
"5"
]
] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PIGT-005 (ENST00000372689)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000124155;r=20:45416137-45426241;t=ENST00000372689
|
5/1438042988718.8_20150728002308-00185-ip-10-236-191-2_430152116_0.json
|
92e2a1fc_pt__PIGT_005__ENST00000372689___UniProt
|
[Name] PIGT-004 [Transcript ID] ENST00000279035 [bp] 1694 [Protein] 476aa [Translation ID] ENSP00000279035 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS54466 [RefSeq] NM_001184730 NP_001171659 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [UniProt]
|
Q969N2
|
[
[
"Q",
"9",
"6",
"9",
"N",
"2"
],
[
"F",
"6",
"W",
"9",
"8",
"3"
],
[
"H",
"7",
"C",
"2",
"Y",
"2"
],
[
"B",
"7",
"Z",
"7",
"C",
"5"
]
] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PIGT-005 (ENST00000372689)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000124155;r=20:45416137-45426241;t=ENST00000372689
|
5/1438042988718.8_20150728002308-00185-ip-10-236-191-2_430152116_0.json
|
92e2a1fc_pt__PIGT_005__ENST00000372689___UniProt
|
[Name] PIGT-008 [Transcript ID] ENST00000545755 [bp] 675 [Protein] 172aa [Translation ID] ENSP00000443963 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [UniProt]
|
F6W983
|
[
[
"Q",
"9",
"6",
"9",
"N",
"2"
],
[
"F",
"6",
"W",
"9",
"8",
"3"
],
[
"H",
"7",
"C",
"2",
"Y",
"2"
],
[
"B",
"7",
"Z",
"7",
"C",
"5"
]
] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PIGT-005 (ENST00000372689)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000124155;r=20:45416137-45426241;t=ENST00000372689
|
5/1438042988718.8_20150728002308-00185-ip-10-236-191-2_430152116_0.json
|
92e2a1fc_pt__PIGT_005__ENST00000372689___UniProt
|
[Name] PIGT-002 [Transcript ID] ENST00000432270 [bp] 326 [Protein] 109aa [Translation ID] ENSP00000408354 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [UniProt]
|
H7C2Y2
|
[
[
"Q",
"9",
"6",
"9",
"N",
"2"
],
[
"F",
"6",
"W",
"9",
"8",
"3"
],
[
"H",
"7",
"C",
"2",
"Y",
"2"
],
[
"B",
"7",
"Z",
"7",
"C",
"5"
]
] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PIGT-005 (ENST00000372689)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000124155;r=20:45416137-45426241;t=ENST00000372689
|
5/1438042988718.8_20150728002308-00185-ip-10-236-191-2_430152116_0.json
|
92e2a1fc_pt__PIGT_005__ENST00000372689___UniProt
|
[Name] PIGT-006 [Transcript ID] ENST00000455050 [bp] 1807 [Protein] 123aa [Translation ID] ENSP00000407574 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [UniProt]
|
B7Z7C5
|
[
[
"Q",
"9",
"6",
"9",
"N",
"2"
],
[
"F",
"6",
"W",
"9",
"8",
"3"
],
[
"H",
"7",
"C",
"2",
"Y",
"2"
],
[
"B",
"7",
"Z",
"7",
"C",
"5"
]
] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PIGT-005 (ENST00000372689)
|
UniProt
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000124155;r=20:45416137-45426241;t=ENST00000372689
|
5/1438042988718.8_20150728002308-00185-ip-10-236-191-2_430152116_0.json
|
dbf59969_pt__TERT_007__ENST00000503656___Flags
|
[Name] TERT-001 [Transcript ID] ENST00000310581 [bp] 4018 [Protein] 1132aa [Translation ID] ENSP00000309572 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS3861 [UniProt] O14746 [RefSeq] NM_198253 NP_937983 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TERT-007 (ENST00000503656)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000164362;r=5:1264248-1266524;t=ENST00000503656
|
5/1438042988718.8_20150728002308-00162-ip-10-236-191-2_428829669_0.json
|
dbf59969_pt__TERT_007__ENST00000503656___Flags
|
[Name] TERT-005 [Transcript ID] ENST00000334602 [bp] 3210 [Protein] 1069aa [Translation ID] ENSP00000334346 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS54831 [UniProt] O14746 [RefSeq] NM_001193376 NP_001180305 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TERT-007 (ENST00000503656)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000164362;r=5:1264248-1266524;t=ENST00000503656
|
5/1438042988718.8_20150728002308-00162-ip-10-236-191-2_428829669_0.json
|
dbf59969_pt__TERT_007__ENST00000503656___Flags
|
[Name] TERT-006 [Transcript ID] ENST00000508104 [bp] 2486 [Protein] 807aa [Translation ID] ENSP00000426042 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] O14746 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TERT-007 (ENST00000503656)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000164362;r=5:1264248-1266524;t=ENST00000503656
|
5/1438042988718.8_20150728002308-00162-ip-10-236-191-2_428829669_0.json
|
dbf59969_pt__TERT_007__ENST00000503656___Flags
|
[Name] TERT-004 [Transcript ID] ENST00000460137 [bp] 2992 [Protein] 795aa [Translation ID] ENSP00000425003 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] O14746 [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TERT-007 (ENST00000503656)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000164362;r=5:1264248-1266524;t=ENST00000503656
|
5/1438042988718.8_20150728002308-00162-ip-10-236-191-2_428829669_0.json
|
dbf59969_pt__TERT_007__ENST00000503656___Flags
|
[Name] TERT-008 [Transcript ID] ENST00000522877 [bp] 408 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TERT-007 (ENST00000503656)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000164362;r=5:1264248-1266524;t=ENST00000503656
|
5/1438042988718.8_20150728002308-00162-ip-10-236-191-2_428829669_0.json
|
dbf59969_pt__TERT_007__ENST00000503656___Flags
|
[Name] TERT-003 [Transcript ID] ENST00000484238 [bp] 2422 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TERT-007 (ENST00000503656)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000164362;r=5:1264248-1266524;t=ENST00000503656
|
5/1438042988718.8_20150728002308-00162-ip-10-236-191-2_428829669_0.json
|
dbf59969_pt__TERT_007__ENST00000503656___Flags
|
[Name] TERT-007 [Transcript ID] ENST00000503656 [bp] 406 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TERT-007 (ENST00000503656)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000164362;r=5:1264248-1266524;t=ENST00000503656
|
5/1438042988718.8_20150728002308-00162-ip-10-236-191-2_428829669_0.json
|
1085d0c6_pt__GLRX_002__ENST00000379979___Biotype
|
[Name] GLRX-002 [Transcript ID] ENST00000379979 [bp] 1366 [Protein] 106aa [Translation ID] ENSP00000369314 [CCDS] CCDS4078 [UniProt] A0A024RAM2 P35754 [RefSeq] NM_001243658 NM_002064 NP_001230587 NP_002055 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: GLRX-002 (ENST00000379979)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000173221;r=5:95813971-95822714;t=ENST00000379979
|
5/1438042987135.9_20150728002307-00222-ip-10-236-191-2_426772567_0.json
|
1085d0c6_pt__GLRX_002__ENST00000379979___Biotype
|
[Name] GLRX-001 [Transcript ID] ENST00000237858 [bp] 1211 [Protein] 106aa [Translation ID] ENSP00000237858 [CCDS] CCDS4078 [UniProt] A0A024RAM2 P35754 [RefSeq] NM_001118890 NM_001243659 NP_001112362 NP_001230588 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: GLRX-002 (ENST00000379979)
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Biotype
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http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000173221;r=5:95813971-95822714;t=ENST00000379979
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5/1438042987135.9_20150728002307-00222-ip-10-236-191-2_426772567_0.json
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1085d0c6_pt__GLRX_002__ENST00000379979___Biotype
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[Name] GLRX-004 [Transcript ID] ENST00000505427 [bp] 632 [Protein] 106aa [Translation ID] ENSP00000427353 [CCDS] CCDS4078 [UniProt] A0A024RAM2 P35754 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
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Genes and/or transcript that contains an open reading frame (ORF).Protein coding
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[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: GLRX-002 (ENST00000379979)
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Biotype
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http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000173221;r=5:95813971-95822714;t=ENST00000379979
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5/1438042987135.9_20150728002307-00222-ip-10-236-191-2_426772567_0.json
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