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87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-009 [Transcript ID] ENST00000542977 [bp] 2766 [Protein] 852aa [Translation ID] ENSP00000444880 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F5H4J1 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-005 [Transcript ID] ENST00000537217 [bp] 2331 [Protein] 691aa [Translation ID] ENSP00000442936 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F5H6Y5 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-015 [Transcript ID] ENST00000543937 [bp] 911 [Protein] 201aa [Translation ID] ENSP00000439759 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F5H0Z7 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-024 [Transcript ID] ENST00000543009 [bp] 874 [Protein] 174aa [Translation ID] ENSP00000438821 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F5H3L6 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-026 [Transcript ID] ENST00000544238 [bp] 792 [Protein] 220aa [Translation ID] ENSP00000442761 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F5H763 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-023 [Transcript ID] ENST00000535087 [bp] 606 [Protein] 109aa [Translation ID] ENSP00000439576 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F5H1L0 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-028 [Transcript ID] ENST00000544129 [bp] 600 [Protein] 159aa [Translation ID] ENSP00000439092 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F5H2F3 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-014 [Transcript ID] ENST00000541641 [bp] 589 [Protein] 72aa [Translation ID] ENSP00000441598 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F5GWK2 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-017 [Transcript ID] ENST00000368959 [bp] 583 [Protein] 91aa [Translation ID] ENSP00000357955 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F8W6T3 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-020 [Transcript ID] ENST00000541719 [bp] 583 [Protein] 83aa [Translation ID] ENSP00000438331 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F5H068 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-019 [Transcript ID] ENST00000535111 [bp] 582 [Protein] 61aa [Translation ID] ENSP00000441674 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F5GWA2 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-022 [Transcript ID] ENST00000535838 [bp] 582 [Protein] 59aa [Translation ID] ENSP00000444831 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F5H4Y4 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-025 [Transcript ID] ENST00000537930 [bp] 582 [Protein] 159aa [Translation ID] ENSP00000438589 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F5H2F3 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-027 [Transcript ID] ENST00000535947 [bp] 576 [Protein] 146aa [Translation ID] ENSP00000444175 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F5GZW1 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-021 [Transcript ID] ENST00000366394 [bp] 539 [Protein] 75aa [Translation ID] ENSP00000438318 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F5H073 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-018 [Transcript ID] ENST00000546131 [bp] 280 [Protein] 56aa [Translation ID] ENSP00000442331 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F5H7R5 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-033 [Transcript ID] ENST00000545721 [bp] 2796 [Protein] 353aa [Translation ID] ENSP00000446396 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] K4DIE0 [RefSeq] - [Flags]
|
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-003 [Transcript ID] ENST00000543450 [bp] 3339 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-007 [Transcript ID] ENST00000534987 [bp] 2211 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-004 [Transcript ID] ENST00000540843 [bp] 1969 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-008 [Transcript ID] ENST00000536119 [bp] 1686 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-032 [Transcript ID] ENST00000541262 [bp] 706 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-013 [Transcript ID] ENST00000540626 [bp] 2276 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-029 [Transcript ID] ENST00000534971 [bp] 878 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-016 [Transcript ID] ENST00000537905 [bp] 598 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-031 [Transcript ID] ENST00000546036 [bp] 592 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
87f8c0f4_t__NUMA1_012__ENST00000541584___Flags
|
[Name] NUMA1-030 [Transcript ID] ENST00000540588 [bp] 216 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NUMA1-012 (ENST00000541584)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000137497;r=11:72002864-72014036;t=ENST00000541584
|
26/1438042986148.56_20150728002306-00107-ip-10-236-191-2_430773584_0.json
|
d8938ba1___DTNBP1_010__ENST00000509674___Biotype
|
[Name] DTNBP1-002 [Transcript ID] ENST00000338950 [bp] 1880 [Protein] 303aa [Translation ID] ENSP00000344718 [CCDS] CCDS4535 [UniProt] Q96EV8 [RefSeq] NM_183040 NP_898861 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: DTNBP1-010 (ENST00000509674)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000047579;r=6:15523055-15548362;t=ENST00000509674
|
26/1438042990900.28_20150728002310-00006-ip-10-236-191-2_429392421_0.json
|
d8938ba1___DTNBP1_010__ENST00000509674___Biotype
|
[Name] DTNBP1-001 [Transcript ID] ENST00000344537 [bp] 1403 [Protein] 351aa [Translation ID] ENSP00000341680 [CCDS] CCDS4534 [UniProt] Q96EV8 [RefSeq] NM_032122 NP_115498 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: DTNBP1-010 (ENST00000509674)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000047579;r=6:15523055-15548362;t=ENST00000509674
|
26/1438042990900.28_20150728002310-00006-ip-10-236-191-2_429392421_0.json
|
d8938ba1___DTNBP1_010__ENST00000509674___Biotype
|
[Name] DTNBP1-201 [Transcript ID] ENST00000355917 [bp] 1359 [Protein] 334aa [Translation ID] ENSP00000348183 [CCDS] CCDS75405 [UniProt] A6NFV8 [RefSeq] NM_001271667 NM_001271668 NP_001258596 NP_001258597 [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: DTNBP1-010 (ENST00000509674)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000047579;r=6:15523055-15548362;t=ENST00000509674
|
26/1438042990900.28_20150728002310-00006-ip-10-236-191-2_429392421_0.json
|
d8938ba1___DTNBP1_010__ENST00000509674___Biotype
|
[Name] DTNBP1-202 [Transcript ID] ENST00000622898 [bp] 1305 [Protein] 316aa [Translation ID] ENSP00000481997 [CCDS] CCDS75404 [UniProt] A0A087WYP9 [RefSeq] NM_001271669 NP_001258598 [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: DTNBP1-010 (ENST00000509674)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000047579;r=6:15523055-15548362;t=ENST00000509674
|
26/1438042990900.28_20150728002310-00006-ip-10-236-191-2_429392421_0.json
|
d8938ba1___DTNBP1_010__ENST00000509674___Biotype
|
[Name] DTNBP1-003 [Transcript ID] ENST00000462989 [bp] 1010 [Protein] 195aa [Translation ID] ENSP00000427239 [CCDS] - [UniProt] D6RJC6 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: DTNBP1-010 (ENST00000509674)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000047579;r=6:15523055-15548362;t=ENST00000509674
|
26/1438042990900.28_20150728002310-00006-ip-10-236-191-2_429392421_0.json
|
d8938ba1___DTNBP1_010__ENST00000509674___Biotype
|
[Name] DTNBP1-008 [Transcript ID] ENST00000511762 [bp] 843 [Protein] 231aa [Translation ID] ENSP00000427473 [CCDS] - [UniProt] D6RID1 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: DTNBP1-010 (ENST00000509674)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000047579;r=6:15523055-15548362;t=ENST00000509674
|
26/1438042990900.28_20150728002310-00006-ip-10-236-191-2_429392421_0.json
|
d8938ba1___DTNBP1_010__ENST00000509674___Biotype
|
[Name] DTNBP1-010 [Transcript ID] ENST00000509674 [bp] 498 [Protein] 142aa [Translation ID] ENSP00000421797 [CCDS] - [UniProt] D6RAR7 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: DTNBP1-010 (ENST00000509674)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000047579;r=6:15523055-15548362;t=ENST00000509674
|
26/1438042990900.28_20150728002310-00006-ip-10-236-191-2_429392421_0.json
|
d8938ba1___DTNBP1_010__ENST00000509674___Biotype
|
[Name] DTNBP1-005 [Transcript ID] ENST00000506844 [bp] 1542 [Protein] 46aa [Translation ID] ENSP00000424202 [CCDS] - [UniProt] D6RB80 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: DTNBP1-010 (ENST00000509674)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000047579;r=6:15523055-15548362;t=ENST00000509674
|
26/1438042990900.28_20150728002310-00006-ip-10-236-191-2_429392421_0.json
|
d8938ba1___DTNBP1_010__ENST00000509674___Biotype
|
[Name] DTNBP1-004 [Transcript ID] ENST00000513680 [bp] 1518 [Protein] 46aa [Translation ID] ENSP00000424357 [CCDS] - [UniProt] D6RB80 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: DTNBP1-010 (ENST00000509674)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000047579;r=6:15523055-15548362;t=ENST00000509674
|
26/1438042990900.28_20150728002310-00006-ip-10-236-191-2_429392421_0.json
|
d8938ba1___DTNBP1_010__ENST00000509674___Biotype
|
[Name] DTNBP1-007 [Transcript ID] ENST00000510395 [bp] 1404 [Protein] 44aa [Translation ID] ENSP00000424685 [CCDS] - [UniProt] D6RAX1 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: DTNBP1-010 (ENST00000509674)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000047579;r=6:15523055-15548362;t=ENST00000509674
|
26/1438042990900.28_20150728002310-00006-ip-10-236-191-2_429392421_0.json
|
d8938ba1___DTNBP1_010__ENST00000509674___Biotype
|
[Name] DTNBP1-006 [Transcript ID] ENST00000515875 [bp] 1306 [Protein] 208aa [Translation ID] ENSP00000425495 [CCDS] - [UniProt] D6RCT8 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: DTNBP1-010 (ENST00000509674)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000047579;r=6:15523055-15548362;t=ENST00000509674
|
26/1438042990900.28_20150728002310-00006-ip-10-236-191-2_429392421_0.json
|
d8938ba1___DTNBP1_010__ENST00000509674___Biotype
|
[Name] DTNBP1-009 [Transcript ID] ENST00000514651 [bp] 866 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - cDNA sequence - Transcript: DTNBP1-010 (ENST00000509674)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/Sequence_cDNA?db=core;g=ENSG00000047579;r=6:15523055-15548362;t=ENST00000509674
|
26/1438042990900.28_20150728002310-00006-ip-10-236-191-2_429392421_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-202 [Transcript ID] ENST00000395611 [bp] 5844 [Protein] 427aa [Translation ID] ENSP00000378974 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS7223 [UniProt] A1L4K2 P45983 [RefSeq] NM_001278547 NP_001265476 [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-006 [Transcript ID] ENST00000374189 [bp] 5796 [Protein] 427aa [Translation ID] ENSP00000363304 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS7224 [UniProt] P45983 [RefSeq] NM_139049 NP_620637 [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL4 - APPRIS candidate principal isoform (longest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-011 [Transcript ID] ENST00000374182 [bp] 5638 [Protein] 384aa [Translation ID] ENSP00000363297 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS7225 [UniProt] P45983 [RefSeq] NM_002750 NP_002741 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-012 [Transcript ID] ENST00000374179 [bp] 5637 [Protein] 384aa [Translation ID] ENSP00000363294 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS7226 [UniProt] P45983 [RefSeq] NM_139046 NP_620634 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1ALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-014 [Transcript ID] ENST00000374176 [bp] 5628 [Protein] 427aa [Translation ID] ENSP00000363291 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS7223 [UniProt] A1L4K2 P45983 [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1ALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-201 [Transcript ID] ENST00000360332 [bp] 5438 [Protein] 308aa [Translation ID] ENSP00000353483 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS60527 [UniProt] P45983 [RefSeq] NM_001278548 NP_001265477 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-008 [Transcript ID] ENST00000432379 [bp] 907 [Protein] 142aa [Translation ID] ENSP00000387936 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9J762 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-009 [Transcript ID] ENST00000426557 [bp] 860 [Protein] 142aa [Translation ID] ENSP00000397729 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9J762 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-013 [Transcript ID] ENST00000374174 [bp] 739 [Protein] 218aa [Translation ID] ENSP00000363289 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A6NF29 [RefSeq] - [Flags]
|
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-004 [Transcript ID] ENST00000429041 [bp] 603 [Protein] 97aa [Translation ID] ENSP00000393223 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9JWQ4 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-002 [Transcript ID] ENST00000459755 [bp] 2372 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-010 [Transcript ID] ENST00000476134 [bp] 732 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-005 [Transcript ID] ENST00000469879 [bp] 537 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-007 [Transcript ID] ENST00000482840 [bp] 450 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-001 [Transcript ID] ENST00000469110 [bp] 3595 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
a12086a9_t__MAPK8_013__ENST00000374174___Flags
|
[Name] MAPK8-003 [Transcript ID] ENST00000471272 [bp] 656 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: MAPK8-013 (ENST00000374174)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000107643;r=10:48401661-48425831;t=ENST00000374174
|
26/1438042990900.28_20150728002310-00137-ip-10-236-191-2_411731036_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-001 [Transcript ID] ENST00000342085 [bp] 7241 [Protein] 556aa [Translation ID] ENSP00000344220 [CCDS] CCDS10472 [UniProt] O15530 [RefSeq] NM_002613 NP_002604 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-002 [Transcript ID] ENST00000268673 [bp] 4728 [Protein] 429aa [Translation ID] ENSP00000268673 [CCDS] CCDS10473 [UniProt] O15530 [RefSeq] NM_031268 NP_112558 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-013 [Transcript ID] ENST00000441549 [bp] 1729 [Protein] 454aa [Translation ID] ENSP00000395357 [CCDS] CCDS58411 [UniProt] O15530 [RefSeq] NM_001261816 NP_001248745 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-003 [Transcript ID] ENST00000389224 [bp] 2416 [Protein] 529aa [Translation ID] ENSP00000373876 [CCDS] - [UniProt] E9PER6 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-008 [Transcript ID] ENST00000461815 [bp] 611 [Protein] 149aa [Translation ID] ENSP00000455551 [CCDS] - [UniProt] H3BQ10 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-006 [Transcript ID] ENST00000474706 [bp] 699 [Protein] 35aa [Translation ID] ENSP00000455025 [CCDS] - [UniProt] H3BNV5 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-007 [Transcript ID] ENST00000492021 [bp] 552 [Protein] 55aa [Translation ID] ENSP00000455684 [CCDS] - [UniProt] H3BQA3 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-012 [Transcript ID] ENST00000478708 [bp] 445 [Protein] 40aa [Translation ID] ENSP00000455438 [CCDS] - [UniProt] H3BPR5 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-011 [Transcript ID] ENST00000471311 [bp] 621 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-017 [Transcript ID] ENST00000561962 [bp] 570 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-009 [Transcript ID] ENST00000460496 [bp] 569 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-016 [Transcript ID] ENST00000462923 [bp] 550 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
4a894deb_t__PDPK1_008__ENST00000461815___Biotype
|
[Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - External data - Transcript: PDPK1-008 (ENST00000461815)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ExternalData?db=core;g=ENSG00000140992;r=16:2606897-2634065;t=ENST00000461815
|
26/1438042990900.28_20150728002310-00071-ip-10-236-191-2_418775451_0.json
|
1ddf0d24__Gene__NTNG1__ENSG00000162631___Flags
|
[Name] NTNG1-006 [Transcript ID] ENST00000370068 [bp] 4034 [Protein] 539aa [Translation ID] ENSP00000359085 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS44180 [UniProt] Q9Y2I2 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: NTNG1 (ENSG00000162631)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000162631;r=1:107140007-107483458
|
26/1438042989826.86_20150728002309-00234-ip-10-236-191-2_432664665_0.json
|
1ddf0d24__Gene__NTNG1__ENSG00000162631___Flags
|
[Name] NTNG1-202 [Transcript ID] ENST00000370073 [bp] 3347 [Protein] 539aa [Translation ID] ENSP00000359090 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS44180 [UniProt] Q9Y2I2 [RefSeq] NM_001113226 NP_001106697 [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: NTNG1 (ENSG00000162631)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000162631;r=1:107140007-107483458
|
26/1438042989826.86_20150728002309-00234-ip-10-236-191-2_432664665_0.json
|
1ddf0d24__Gene__NTNG1__ENSG00000162631___Flags
|
[Name] NTNG1-201 [Transcript ID] ENST00000370071 [bp] 3149 [Protein] 480aa [Translation ID] ENSP00000359088 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS44179 [UniProt] Q9Y2I2 X5DNW2 [RefSeq] NM_001113228 NP_001106699 [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: NTNG1 (ENSG00000162631)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000162631;r=1:107140007-107483458
|
26/1438042989826.86_20150728002309-00234-ip-10-236-191-2_432664665_0.json
|
1ddf0d24__Gene__NTNG1__ENSG00000162631___Flags
|
[Name] NTNG1-001 [Transcript ID] ENST00000370074 [bp] 3048 [Protein] 438aa [Translation ID] ENSP00000359091 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS30785 [UniProt] Q9Y2I2 [RefSeq] NM_014917 NP_055732 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: NTNG1 (ENSG00000162631)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000162631;r=1:107140007-107483458
|
26/1438042989826.86_20150728002309-00234-ip-10-236-191-2_432664665_0.json
|
1ddf0d24__Gene__NTNG1__ENSG00000162631___Flags
|
[Name] NTNG1-005 [Transcript ID] ENST00000370066 [bp] 1443 [Protein] 480aa [Translation ID] ENSP00000359083 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS44179 [UniProt] Q9Y2I2 X5DNW2 [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: NTNG1 (ENSG00000162631)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000162631;r=1:107140007-107483458
|
26/1438042989826.86_20150728002309-00234-ip-10-236-191-2_432664665_0.json
|
1ddf0d24__Gene__NTNG1__ENSG00000162631___Flags
|
[Name] NTNG1-004 [Transcript ID] ENST00000370067 [bp] 4628 [Protein] 460aa [Translation ID] ENSP00000359084 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q9Y2I2 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: NTNG1 (ENSG00000162631)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000162631;r=1:107140007-107483458
|
26/1438042989826.86_20150728002309-00234-ip-10-236-191-2_432664665_0.json
|
1ddf0d24__Gene__NTNG1__ENSG00000162631___Flags
|
[Name] NTNG1-007 [Transcript ID] ENST00000370065 [bp] 1485 [Protein] 494aa [Translation ID] ENSP00000359082 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q9Y2I2 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: NTNG1 (ENSG00000162631)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000162631;r=1:107140007-107483458
|
26/1438042989826.86_20150728002309-00234-ip-10-236-191-2_432664665_0.json
|
1ddf0d24__Gene__NTNG1__ENSG00000162631___Flags
|
[Name] NTNG1-009 [Transcript ID] ENST00000477948 [bp] 1066 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: NTNG1 (ENSG00000162631)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000162631;r=1:107140007-107483458
|
26/1438042989826.86_20150728002309-00234-ip-10-236-191-2_432664665_0.json
|
1ddf0d24__Gene__NTNG1__ENSG00000162631___Flags
|
[Name] NTNG1-008 [Transcript ID] ENST00000462149 [bp] 830 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: NTNG1 (ENSG00000162631)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000162631;r=1:107140007-107483458
|
26/1438042989826.86_20150728002309-00234-ip-10-236-191-2_432664665_0.json
|
1ddf0d24__Gene__NTNG1__ENSG00000162631___Flags
|
[Name] NTNG1-003 [Transcript ID] ENST00000370076 [bp] 574 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: NTNG1 (ENSG00000162631)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000162631;r=1:107140007-107483458
|
26/1438042989826.86_20150728002309-00234-ip-10-236-191-2_432664665_0.json
|
1ddf0d24__Gene__NTNG1__ENSG00000162631___Flags
|
[Name] NTNG1-002 [Transcript ID] ENST00000294649 [bp] 4703 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: NTNG1 (ENSG00000162631)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000162631;r=1:107140007-107483458
|
26/1438042989826.86_20150728002309-00234-ip-10-236-191-2_432664665_0.json
|
d4ad96f6__Gene__SCN3A__ENSG00000153253___Protein
|
[Name] SCN3A-001 [Transcript ID] ENST00000283254 [bp] 9091 [Translation ID] ENSP00000283254 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS33312 [UniProt] Q9NY46 [RefSeq] NM_001081676 NM_006922 NP_001075145 NP_008853 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL2 - APPRIS candidate principal isoform (CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P2 [Protein]
|
2000aa
|
[
[
"2",
"0",
"0",
"0",
"a",
"a"
],
[
"1",
"9",
"5",
"1",
"a",
"a"
],
[
"1",
"3",
"6",
"4",
"a",
"a"
],
[
"2",
"0",
"0",
"a",
"a"
],
[
"N",
"o",
" ",
"p",
"r",
"o",
"t",
"e",
"i",
"n"
]
] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SCN3A (ENSG00000153253)
|
Protein
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000153253;r=2:165087522-165204067
|
26/1438042990900.28_20150728002310-00193-ip-10-236-191-2_414019942_0.json
|
d4ad96f6__Gene__SCN3A__ENSG00000153253___Protein
|
[Name] SCN3A-002 [Transcript ID] ENST00000409101 [bp] 6599 [Translation ID] ENSP00000386726 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS46440 [UniProt] Q9NY46 [RefSeq] NM_001081677 NP_001075146 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Protein]
|
1951aa
|
[
[
"2",
"0",
"0",
"0",
"a",
"a"
],
[
"1",
"9",
"5",
"1",
"a",
"a"
],
[
"1",
"3",
"6",
"4",
"a",
"a"
],
[
"2",
"0",
"0",
"a",
"a"
],
[
"N",
"o",
" ",
"p",
"r",
"o",
"t",
"e",
"i",
"n"
]
] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SCN3A (ENSG00000153253)
|
Protein
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000153253;r=2:165087522-165204067
|
26/1438042990900.28_20150728002310-00193-ip-10-236-191-2_414019942_0.json
|
d4ad96f6__Gene__SCN3A__ENSG00000153253___Protein
|
[Name] SCN3A-201 [Transcript ID] ENST00000360093 [bp] 9123 [Translation ID] ENSP00000353206 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] Q9NY46 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1 [Protein]
|
2000aa
|
[
[
"2",
"0",
"0",
"0",
"a",
"a"
],
[
"1",
"9",
"5",
"1",
"a",
"a"
],
[
"1",
"3",
"6",
"4",
"a",
"a"
],
[
"2",
"0",
"0",
"a",
"a"
],
[
"N",
"o",
" ",
"p",
"r",
"o",
"t",
"e",
"i",
"n"
]
] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SCN3A (ENSG00000153253)
|
Protein
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000153253;r=2:165087522-165204067
|
26/1438042990900.28_20150728002310-00193-ip-10-236-191-2_414019942_0.json
|
d4ad96f6__Gene__SCN3A__ENSG00000153253___Protein
|
[Name] SCN3A-004 [Transcript ID] ENST00000440431 [bp] 4146 [Translation ID] ENSP00000403348 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E7EUE6 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Protein]
|
1364aa
|
[
[
"2",
"0",
"0",
"0",
"a",
"a"
],
[
"1",
"9",
"5",
"1",
"a",
"a"
],
[
"1",
"3",
"6",
"4",
"a",
"a"
],
[
"2",
"0",
"0",
"a",
"a"
],
[
"N",
"o",
" ",
"p",
"r",
"o",
"t",
"e",
"i",
"n"
]
] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SCN3A (ENSG00000153253)
|
Protein
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000153253;r=2:165087522-165204067
|
26/1438042990900.28_20150728002310-00193-ip-10-236-191-2_414019942_0.json
|
d4ad96f6__Gene__SCN3A__ENSG00000153253___Protein
|
[Name] SCN3A-003 [Transcript ID] ENST00000453007 [bp] 1216 [Translation ID] ENSP00000391569 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9JBM7 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Protein]
|
200aa
|
[
[
"2",
"0",
"0",
"0",
"a",
"a"
],
[
"1",
"9",
"5",
"1",
"a",
"a"
],
[
"1",
"3",
"6",
"4",
"a",
"a"
],
[
"2",
"0",
"0",
"a",
"a"
],
[
"N",
"o",
" ",
"p",
"r",
"o",
"t",
"e",
"i",
"n"
]
] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SCN3A (ENSG00000153253)
|
Protein
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000153253;r=2:165087522-165204067
|
26/1438042990900.28_20150728002310-00193-ip-10-236-191-2_414019942_0.json
|
d4ad96f6__Gene__SCN3A__ENSG00000153253___Protein
|
[Name] SCN3A-007 [Transcript ID] ENST00000465043 [bp] 531 [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Protein]
|
No protein
|
[
[
"2",
"0",
"0",
"0",
"a",
"a"
],
[
"1",
"9",
"5",
"1",
"a",
"a"
],
[
"1",
"3",
"6",
"4",
"a",
"a"
],
[
"2",
"0",
"0",
"a",
"a"
],
[
"N",
"o",
" ",
"p",
"r",
"o",
"t",
"e",
"i",
"n"
]
] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SCN3A (ENSG00000153253)
|
Protein
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000153253;r=2:165087522-165204067
|
26/1438042990900.28_20150728002310-00193-ip-10-236-191-2_414019942_0.json
|
d4ad96f6__Gene__SCN3A__ENSG00000153253___Protein
|
[Name] SCN3A-008 [Transcript ID] ENST00000484898 [bp] 262 [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Protein]
|
No protein
|
[
[
"2",
"0",
"0",
"0",
"a",
"a"
],
[
"1",
"9",
"5",
"1",
"a",
"a"
],
[
"1",
"3",
"6",
"4",
"a",
"a"
],
[
"2",
"0",
"0",
"a",
"a"
],
[
"N",
"o",
" ",
"p",
"r",
"o",
"t",
"e",
"i",
"n"
]
] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SCN3A (ENSG00000153253)
|
Protein
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000153253;r=2:165087522-165204067
|
26/1438042990900.28_20150728002310-00193-ip-10-236-191-2_414019942_0.json
|
d4ad96f6__Gene__SCN3A__ENSG00000153253___Protein
|
[Name] SCN3A-006 [Transcript ID] ENST00000471697 [bp] 555 [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Protein]
|
No protein
|
[
[
"2",
"0",
"0",
"0",
"a",
"a"
],
[
"1",
"9",
"5",
"1",
"a",
"a"
],
[
"1",
"3",
"6",
"4",
"a",
"a"
],
[
"2",
"0",
"0",
"a",
"a"
],
[
"N",
"o",
" ",
"p",
"r",
"o",
"t",
"e",
"i",
"n"
]
] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: SCN3A (ENSG00000153253)
|
Protein
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000153253;r=2:165087522-165204067
|
26/1438042990900.28_20150728002310-00193-ip-10-236-191-2_414019942_0.json
|
b33b07cd___SPATA7_201__ENST00000356583___Biotype
|
[Name] SPATA7-001 [Transcript ID] ENST00000556553 [bp] 2301 [Protein] 567aa [Translation ID] ENSP00000451128 [CCDS] CCDS32132 [UniProt] Q9P0W8 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: SPATA7-201 (ENST00000356583)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000042317;r=14:88385668-88438458;t=ENST00000356583
|
26/1438042986148.56_20150728002306-00172-ip-10-236-191-2_450097558_0.json
|
b33b07cd___SPATA7_201__ENST00000356583___Biotype
|
[Name] SPATA7-002 [Transcript ID] ENST00000393545 [bp] 2123 [Protein] 599aa [Translation ID] ENSP00000377176 [CCDS] CCDS9883 [UniProt] Q9P0W8 V9HVY9 [RefSeq] NM_018418 NP_060888 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: SPATA7-201 (ENST00000356583)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000042317;r=14:88385668-88438458;t=ENST00000356583
|
26/1438042986148.56_20150728002306-00172-ip-10-236-191-2_450097558_0.json
|
b33b07cd___SPATA7_201__ENST00000356583___Biotype
|
[Name] SPATA7-201 [Transcript ID] ENST00000356583 [bp] 1891 [Protein] 567aa [Translation ID] ENSP00000348991 [CCDS] CCDS32132 [UniProt] Q9P0W8 [RefSeq] NM_001040428 NP_001035518 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: SPATA7-201 (ENST00000356583)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000042317;r=14:88385668-88438458;t=ENST00000356583
|
26/1438042986148.56_20150728002306-00172-ip-10-236-191-2_450097558_0.json
|
b33b07cd___SPATA7_201__ENST00000356583___Biotype
|
[Name] SPATA7-004 [Transcript ID] ENST00000045347 [bp] 1410 [Protein] 458aa [Translation ID] ENSP00000045347 [CCDS] - [UniProt] Q9P0W8 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: SPATA7-201 (ENST00000356583)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000042317;r=14:88385668-88438458;t=ENST00000356583
|
26/1438042986148.56_20150728002306-00172-ip-10-236-191-2_450097558_0.json
|
b33b07cd___SPATA7_201__ENST00000356583___Biotype
|
[Name] SPATA7-015 [Transcript ID] ENST00000553885 [bp] 805 [Protein] 228aa [Translation ID] ENSP00000450606 [CCDS] - [UniProt] G3V2E1 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: SPATA7-201 (ENST00000356583)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000042317;r=14:88385668-88438458;t=ENST00000356583
|
26/1438042986148.56_20150728002306-00172-ip-10-236-191-2_450097558_0.json
|
b33b07cd___SPATA7_201__ENST00000356583___Biotype
|
[Name] SPATA7-021 [Transcript ID] ENST00000556406 [bp] 758 [Protein] 91aa [Translation ID] ENSP00000450809 [CCDS] - [UniProt] H0YJ48 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: SPATA7-201 (ENST00000356583)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000042317;r=14:88385668-88438458;t=ENST00000356583
|
26/1438042986148.56_20150728002306-00172-ip-10-236-191-2_450097558_0.json
|
b33b07cd___SPATA7_201__ENST00000356583___Biotype
|
[Name] SPATA7-014 [Transcript ID] ENST00000555401 [bp] 545 [Protein] 139aa [Translation ID] ENSP00000452435 [CCDS] - [UniProt] G3V5N2 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: SPATA7-201 (ENST00000356583)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000042317;r=14:88385668-88438458;t=ENST00000356583
|
26/1438042986148.56_20150728002306-00172-ip-10-236-191-2_450097558_0.json
|
b33b07cd___SPATA7_201__ENST00000356583___Biotype
|
[Name] SPATA7-020 [Transcript ID] ENST00000554802 [bp] 401 [Protein] 76aa [Translation ID] ENSP00000451019 [CCDS] - [UniProt] H0YJ93 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: SPATA7-201 (ENST00000356583)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000042317;r=14:88385668-88438458;t=ENST00000356583
|
26/1438042986148.56_20150728002306-00172-ip-10-236-191-2_450097558_0.json
|
b33b07cd___SPATA7_201__ENST00000356583___Biotype
|
[Name] SPATA7-013 [Transcript ID] ENST00000555515 [bp] 1088 [Protein] 81aa [Translation ID] ENSP00000450882 [CCDS] - [UniProt] G3V2V4 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: SPATA7-201 (ENST00000356583)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000042317;r=14:88385668-88438458;t=ENST00000356583
|
26/1438042986148.56_20150728002306-00172-ip-10-236-191-2_450097558_0.json
|
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