peacock-data-public-datasets-idc-cronscript
/
venv
/lib
/python3.10
/site-packages
/pyarrow
/include
/arrow
/array
/data.h
// Licensed to the Apache Software Foundation (ASF) under one | |
// or more contributor license agreements. See the NOTICE file | |
// distributed with this work for additional information | |
// regarding copyright ownership. The ASF licenses this file | |
// to you under the Apache License, Version 2.0 (the | |
// "License"); you may not use this file except in compliance | |
// with the License. You may obtain a copy of the License at | |
// | |
// http://www.apache.org/licenses/LICENSE-2.0 | |
// | |
// Unless required by applicable law or agreed to in writing, | |
// software distributed under the License is distributed on an | |
// "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY | |
// KIND, either express or implied. See the License for the | |
// specific language governing permissions and limitations | |
// under the License. | |
namespace arrow { | |
namespace internal { | |
// ---------------------------------------------------------------------- | |
// Null handling for types without a validity bitmap and the dictionary type | |
ARROW_EXPORT bool IsNullSparseUnion(const ArrayData& data, int64_t i); | |
ARROW_EXPORT bool IsNullDenseUnion(const ArrayData& data, int64_t i); | |
ARROW_EXPORT bool IsNullRunEndEncoded(const ArrayData& data, int64_t i); | |
ARROW_EXPORT bool UnionMayHaveLogicalNulls(const ArrayData& data); | |
ARROW_EXPORT bool RunEndEncodedMayHaveLogicalNulls(const ArrayData& data); | |
ARROW_EXPORT bool DictionaryMayHaveLogicalNulls(const ArrayData& data); | |
} // namespace internal | |
// When slicing, we do not know the null count of the sliced range without | |
// doing some computation. To avoid doing this eagerly, we set the null count | |
// to -1 (any negative number will do). When Array::null_count is called the | |
// first time, the null count will be computed. See ARROW-33 | |
constexpr int64_t kUnknownNullCount = -1; | |
// ---------------------------------------------------------------------- | |
// Generic array data container | |
/// \class ArrayData | |
/// \brief Mutable container for generic Arrow array data | |
/// | |
/// This data structure is a self-contained representation of the memory and | |
/// metadata inside an Arrow array data structure (called vectors in Java). The | |
/// classes arrow::Array and its subclasses provide strongly-typed accessors | |
/// with support for the visitor pattern and other affordances. | |
/// | |
/// This class is designed for easy internal data manipulation, analytical data | |
/// processing, and data transport to and from IPC messages. For example, we | |
/// could cast from int64 to float64 like so: | |
/// | |
/// Int64Array arr = GetMyData(); | |
/// auto new_data = arr.data()->Copy(); | |
/// new_data->type = arrow::float64(); | |
/// DoubleArray double_arr(new_data); | |
/// | |
/// This object is also useful in an analytics setting where memory may be | |
/// reused. For example, if we had a group of operations all returning doubles, | |
/// say: | |
/// | |
/// Log(Sqrt(Expr(arr))) | |
/// | |
/// Then the low-level implementations of each of these functions could have | |
/// the signatures | |
/// | |
/// void Log(const ArrayData& values, ArrayData* out); | |
/// | |
/// As another example a function may consume one or more memory buffers in an | |
/// input array and replace them with newly-allocated data, changing the output | |
/// data type as well. | |
struct ARROW_EXPORT ArrayData { | |
ArrayData() = default; | |
ArrayData(std::shared_ptr<DataType> type, int64_t length, | |
int64_t null_count = kUnknownNullCount, int64_t offset = 0) | |
: type(std::move(type)), length(length), null_count(null_count), offset(offset) {} | |
ArrayData(std::shared_ptr<DataType> type, int64_t length, | |
std::vector<std::shared_ptr<Buffer>> buffers, | |
int64_t null_count = kUnknownNullCount, int64_t offset = 0) | |
: ArrayData(std::move(type), length, null_count, offset) { | |
this->buffers = std::move(buffers); | |
} | |
ArrayData(std::shared_ptr<DataType> type, int64_t length, | |
std::vector<std::shared_ptr<Buffer>> buffers, | |
std::vector<std::shared_ptr<ArrayData>> child_data, | |
int64_t null_count = kUnknownNullCount, int64_t offset = 0) | |
: ArrayData(std::move(type), length, null_count, offset) { | |
this->buffers = std::move(buffers); | |
this->child_data = std::move(child_data); | |
} | |
static std::shared_ptr<ArrayData> Make(std::shared_ptr<DataType> type, int64_t length, | |
std::vector<std::shared_ptr<Buffer>> buffers, | |
int64_t null_count = kUnknownNullCount, | |
int64_t offset = 0); | |
static std::shared_ptr<ArrayData> Make( | |
std::shared_ptr<DataType> type, int64_t length, | |
std::vector<std::shared_ptr<Buffer>> buffers, | |
std::vector<std::shared_ptr<ArrayData>> child_data, | |
int64_t null_count = kUnknownNullCount, int64_t offset = 0); | |
static std::shared_ptr<ArrayData> Make( | |
std::shared_ptr<DataType> type, int64_t length, | |
std::vector<std::shared_ptr<Buffer>> buffers, | |
std::vector<std::shared_ptr<ArrayData>> child_data, | |
std::shared_ptr<ArrayData> dictionary, int64_t null_count = kUnknownNullCount, | |
int64_t offset = 0); | |
static std::shared_ptr<ArrayData> Make(std::shared_ptr<DataType> type, int64_t length, | |
int64_t null_count = kUnknownNullCount, | |
int64_t offset = 0); | |
// Move constructor | |
ArrayData(ArrayData&& other) noexcept | |
: type(std::move(other.type)), | |
length(other.length), | |
offset(other.offset), | |
buffers(std::move(other.buffers)), | |
child_data(std::move(other.child_data)), | |
dictionary(std::move(other.dictionary)) { | |
SetNullCount(other.null_count); | |
} | |
// Copy constructor | |
ArrayData(const ArrayData& other) noexcept | |
: type(other.type), | |
length(other.length), | |
offset(other.offset), | |
buffers(other.buffers), | |
child_data(other.child_data), | |
dictionary(other.dictionary) { | |
SetNullCount(other.null_count); | |
} | |
// Move assignment | |
ArrayData& operator=(ArrayData&& other) { | |
type = std::move(other.type); | |
length = other.length; | |
SetNullCount(other.null_count); | |
offset = other.offset; | |
buffers = std::move(other.buffers); | |
child_data = std::move(other.child_data); | |
dictionary = std::move(other.dictionary); | |
return *this; | |
} | |
// Copy assignment | |
ArrayData& operator=(const ArrayData& other) { | |
type = other.type; | |
length = other.length; | |
SetNullCount(other.null_count); | |
offset = other.offset; | |
buffers = other.buffers; | |
child_data = other.child_data; | |
dictionary = other.dictionary; | |
return *this; | |
} | |
std::shared_ptr<ArrayData> Copy() const { return std::make_shared<ArrayData>(*this); } | |
/// \brief Copy all buffers and children recursively to destination MemoryManager | |
/// | |
/// This utilizes MemoryManager::CopyBuffer to create a new ArrayData object | |
/// recursively copying the buffers and all child buffers to the destination | |
/// memory manager. This includes dictionaries if applicable. | |
Result<std::shared_ptr<ArrayData>> CopyTo( | |
const std::shared_ptr<MemoryManager>& to) const; | |
/// \brief View or Copy this ArrayData to destination memory manager. | |
/// | |
/// Tries to view the buffer contents on the given memory manager's device | |
/// if possible (to avoid a copy) but falls back to copying if a no-copy view | |
/// isn't supported. | |
Result<std::shared_ptr<ArrayData>> ViewOrCopyTo( | |
const std::shared_ptr<MemoryManager>& to) const; | |
bool IsNull(int64_t i) const { return !IsValid(i); } | |
bool IsValid(int64_t i) const { | |
if (buffers[0] != NULLPTR) { | |
return bit_util::GetBit(buffers[0]->data(), i + offset); | |
} | |
const auto type = this->type->id(); | |
if (type == Type::SPARSE_UNION) { | |
return !internal::IsNullSparseUnion(*this, i); | |
} | |
if (type == Type::DENSE_UNION) { | |
return !internal::IsNullDenseUnion(*this, i); | |
} | |
if (type == Type::RUN_END_ENCODED) { | |
return !internal::IsNullRunEndEncoded(*this, i); | |
} | |
return null_count.load() != length; | |
} | |
// Access a buffer's data as a typed C pointer | |
template <typename T> | |
inline const T* GetValues(int i, int64_t absolute_offset) const { | |
if (buffers[i]) { | |
return reinterpret_cast<const T*>(buffers[i]->data()) + absolute_offset; | |
} else { | |
return NULLPTR; | |
} | |
} | |
template <typename T> | |
inline const T* GetValues(int i) const { | |
return GetValues<T>(i, offset); | |
} | |
// Like GetValues, but returns NULLPTR instead of aborting if the underlying | |
// buffer is not a CPU buffer. | |
template <typename T> | |
inline const T* GetValuesSafe(int i, int64_t absolute_offset) const { | |
if (buffers[i] && buffers[i]->is_cpu()) { | |
return reinterpret_cast<const T*>(buffers[i]->data()) + absolute_offset; | |
} else { | |
return NULLPTR; | |
} | |
} | |
template <typename T> | |
inline const T* GetValuesSafe(int i) const { | |
return GetValuesSafe<T>(i, offset); | |
} | |
// Access a buffer's data as a typed C pointer | |
template <typename T> | |
inline T* GetMutableValues(int i, int64_t absolute_offset) { | |
if (buffers[i]) { | |
return reinterpret_cast<T*>(buffers[i]->mutable_data()) + absolute_offset; | |
} else { | |
return NULLPTR; | |
} | |
} | |
template <typename T> | |
inline T* GetMutableValues(int i) { | |
return GetMutableValues<T>(i, offset); | |
} | |
/// \brief Construct a zero-copy slice of the data with the given offset and length | |
std::shared_ptr<ArrayData> Slice(int64_t offset, int64_t length) const; | |
/// \brief Input-checking variant of Slice | |
/// | |
/// An Invalid Status is returned if the requested slice falls out of bounds. | |
/// Note that unlike Slice, `length` isn't clamped to the available buffer size. | |
Result<std::shared_ptr<ArrayData>> SliceSafe(int64_t offset, int64_t length) const; | |
void SetNullCount(int64_t v) { null_count.store(v); } | |
/// \brief Return physical null count, or compute and set it if it's not known | |
int64_t GetNullCount() const; | |
/// \brief Return true if the data has a validity bitmap and the physical null | |
/// count is known to be non-zero or not yet known. | |
/// | |
/// Note that this is not the same as MayHaveLogicalNulls, which also checks | |
/// for the presence of nulls in child data for types like unions and run-end | |
/// encoded types. | |
/// | |
/// \see HasValidityBitmap | |
/// \see MayHaveLogicalNulls | |
bool MayHaveNulls() const { | |
// If an ArrayData is slightly malformed it may have kUnknownNullCount set | |
// but no buffer | |
return null_count.load() != 0 && buffers[0] != NULLPTR; | |
} | |
/// \brief Return true if the data has a validity bitmap | |
bool HasValidityBitmap() const { return buffers[0] != NULLPTR; } | |
/// \brief Return true if the validity bitmap may have 0's in it, or if the | |
/// child arrays (in the case of types without a validity bitmap) may have | |
/// nulls, or if the dictionary of dictionay array may have nulls. | |
/// | |
/// This is not a drop-in replacement for MayHaveNulls, as historically | |
/// MayHaveNulls() has been used to check for the presence of a validity | |
/// bitmap that needs to be checked. | |
/// | |
/// Code that previously used MayHaveNulls() and then dealt with the validity | |
/// bitmap directly can be fixed to handle all types correctly without | |
/// performance degradation when handling most types by adopting | |
/// HasValidityBitmap and MayHaveLogicalNulls. | |
/// | |
/// Before: | |
/// | |
/// uint8_t* validity = array.MayHaveNulls() ? array.buffers[0].data : NULLPTR; | |
/// for (int64_t i = 0; i < array.length; ++i) { | |
/// if (validity && !bit_util::GetBit(validity, i)) { | |
/// continue; // skip a NULL | |
/// } | |
/// ... | |
/// } | |
/// | |
/// After: | |
/// | |
/// bool all_valid = !array.MayHaveLogicalNulls(); | |
/// uint8_t* validity = array.HasValidityBitmap() ? array.buffers[0].data : NULLPTR; | |
/// for (int64_t i = 0; i < array.length; ++i) { | |
/// bool is_valid = all_valid || | |
/// (validity && bit_util::GetBit(validity, i)) || | |
/// array.IsValid(i); | |
/// if (!is_valid) { | |
/// continue; // skip a NULL | |
/// } | |
/// ... | |
/// } | |
bool MayHaveLogicalNulls() const { | |
if (buffers[0] != NULLPTR) { | |
return null_count.load() != 0; | |
} | |
const auto t = type->id(); | |
if (t == Type::SPARSE_UNION || t == Type::DENSE_UNION) { | |
return internal::UnionMayHaveLogicalNulls(*this); | |
} | |
if (t == Type::RUN_END_ENCODED) { | |
return internal::RunEndEncodedMayHaveLogicalNulls(*this); | |
} | |
if (t == Type::DICTIONARY) { | |
return internal::DictionaryMayHaveLogicalNulls(*this); | |
} | |
return null_count.load() != 0; | |
} | |
/// \brief Computes the logical null count for arrays of all types including | |
/// those that do not have a validity bitmap like union and run-end encoded | |
/// arrays | |
/// | |
/// If the array has a validity bitmap, this function behaves the same as | |
/// GetNullCount. For types that have no validity bitmap, this function will | |
/// recompute the null count every time it is called. | |
/// | |
/// \see GetNullCount | |
int64_t ComputeLogicalNullCount() const; | |
std::shared_ptr<DataType> type; | |
int64_t length = 0; | |
mutable std::atomic<int64_t> null_count{0}; | |
// The logical start point into the physical buffers (in values, not bytes). | |
// Note that, for child data, this must be *added* to the child data's own offset. | |
int64_t offset = 0; | |
std::vector<std::shared_ptr<Buffer>> buffers; | |
std::vector<std::shared_ptr<ArrayData>> child_data; | |
// The dictionary for this Array, if any. Only used for dictionary type | |
std::shared_ptr<ArrayData> dictionary; | |
}; | |
/// \brief A non-owning Buffer reference | |
struct ARROW_EXPORT BufferSpan { | |
// It is the user of this class's responsibility to ensure that | |
// buffers that were const originally are not written to | |
// accidentally. | |
uint8_t* data = NULLPTR; | |
int64_t size = 0; | |
// Pointer back to buffer that owns this memory | |
const std::shared_ptr<Buffer>* owner = NULLPTR; | |
template <typename T> | |
const T* data_as() const { | |
return reinterpret_cast<const T*>(data); | |
} | |
template <typename T> | |
T* mutable_data_as() { | |
return reinterpret_cast<T*>(data); | |
} | |
}; | |
/// \brief EXPERIMENTAL: A non-owning ArrayData reference that is cheaply | |
/// copyable and does not contain any shared_ptr objects. Do not use in public | |
/// APIs aside from compute kernels for now | |
struct ARROW_EXPORT ArraySpan { | |
const DataType* type = NULLPTR; | |
int64_t length = 0; | |
mutable int64_t null_count = kUnknownNullCount; | |
int64_t offset = 0; | |
BufferSpan buffers[3]; | |
ArraySpan() = default; | |
explicit ArraySpan(const DataType* type, int64_t length) : type(type), length(length) {} | |
ArraySpan(const ArrayData& data) { // NOLINT implicit conversion | |
SetMembers(data); | |
} | |
explicit ArraySpan(const Scalar& data) { FillFromScalar(data); } | |
/// If dictionary-encoded, put dictionary in the first entry | |
std::vector<ArraySpan> child_data; | |
/// \brief Populate ArraySpan to look like an array of length 1 pointing at | |
/// the data members of a Scalar value | |
void FillFromScalar(const Scalar& value); | |
void SetMembers(const ArrayData& data); | |
void SetBuffer(int index, const std::shared_ptr<Buffer>& buffer) { | |
this->buffers[index].data = const_cast<uint8_t*>(buffer->data()); | |
this->buffers[index].size = buffer->size(); | |
this->buffers[index].owner = &buffer; | |
} | |
const ArraySpan& dictionary() const { return child_data[0]; } | |
/// \brief Return the number of buffers (out of 3) that are used to | |
/// constitute this array | |
int num_buffers() const; | |
// Access a buffer's data as a typed C pointer | |
template <typename T> | |
inline T* GetValues(int i, int64_t absolute_offset) { | |
return reinterpret_cast<T*>(buffers[i].data) + absolute_offset; | |
} | |
template <typename T> | |
inline T* GetValues(int i) { | |
return GetValues<T>(i, this->offset); | |
} | |
// Access a buffer's data as a typed C pointer | |
template <typename T> | |
inline const T* GetValues(int i, int64_t absolute_offset) const { | |
return reinterpret_cast<const T*>(buffers[i].data) + absolute_offset; | |
} | |
template <typename T> | |
inline const T* GetValues(int i) const { | |
return GetValues<T>(i, this->offset); | |
} | |
/// \brief Access a buffer's data as a span | |
/// | |
/// \param i The buffer index | |
/// \param length The required length (in number of typed values) of the requested span | |
/// \pre i > 0 | |
/// \pre length <= the length of the buffer (in number of values) that's expected for | |
/// this array type | |
/// \return A span<const T> of the requested length | |
template <typename T> | |
util::span<const T> GetSpan(int i, int64_t length) const { | |
const int64_t buffer_length = buffers[i].size / static_cast<int64_t>(sizeof(T)); | |
assert(i > 0 && length + offset <= buffer_length); | |
ARROW_UNUSED(buffer_length); | |
return util::span<const T>(buffers[i].data_as<T>() + this->offset, length); | |
} | |
/// \brief Access a buffer's data as a span | |
/// | |
/// \param i The buffer index | |
/// \param length The required length (in number of typed values) of the requested span | |
/// \pre i > 0 | |
/// \pre length <= the length of the buffer (in number of values) that's expected for | |
/// this array type | |
/// \return A span<T> of the requested length | |
template <typename T> | |
util::span<T> GetSpan(int i, int64_t length) { | |
const int64_t buffer_length = buffers[i].size / static_cast<int64_t>(sizeof(T)); | |
assert(i > 0 && length + offset <= buffer_length); | |
ARROW_UNUSED(buffer_length); | |
return util::span<T>(buffers[i].mutable_data_as<T>() + this->offset, length); | |
} | |
inline bool IsNull(int64_t i) const { return !IsValid(i); } | |
inline bool IsValid(int64_t i) const { | |
if (this->buffers[0].data != NULLPTR) { | |
return bit_util::GetBit(this->buffers[0].data, i + this->offset); | |
} else { | |
const auto type = this->type->id(); | |
if (type == Type::SPARSE_UNION) { | |
return !IsNullSparseUnion(i); | |
} | |
if (type == Type::DENSE_UNION) { | |
return !IsNullDenseUnion(i); | |
} | |
if (type == Type::RUN_END_ENCODED) { | |
return !IsNullRunEndEncoded(i); | |
} | |
return this->null_count != this->length; | |
} | |
} | |
std::shared_ptr<ArrayData> ToArrayData() const; | |
std::shared_ptr<Array> ToArray() const; | |
std::shared_ptr<Buffer> GetBuffer(int index) const { | |
const BufferSpan& buf = this->buffers[index]; | |
if (buf.owner) { | |
return *buf.owner; | |
} else if (buf.data != NULLPTR) { | |
// Buffer points to some memory without an owning buffer | |
return std::make_shared<Buffer>(buf.data, buf.size); | |
} else { | |
return NULLPTR; | |
} | |
} | |
void SetSlice(int64_t offset, int64_t length) { | |
this->offset = offset; | |
this->length = length; | |
if (this->type->id() == Type::NA) { | |
this->null_count = this->length; | |
} else if (this->MayHaveNulls()) { | |
this->null_count = kUnknownNullCount; | |
} else { | |
this->null_count = 0; | |
} | |
} | |
/// \brief Return physical null count, or compute and set it if it's not known | |
int64_t GetNullCount() const; | |
/// \brief Return true if the array has a validity bitmap and the physical null | |
/// count is known to be non-zero or not yet known | |
/// | |
/// Note that this is not the same as MayHaveLogicalNulls, which also checks | |
/// for the presence of nulls in child data for types like unions and run-end | |
/// encoded types. | |
/// | |
/// \see HasValidityBitmap | |
/// \see MayHaveLogicalNulls | |
bool MayHaveNulls() const { | |
// If an ArrayData is slightly malformed it may have kUnknownNullCount set | |
// but no buffer | |
return null_count != 0 && buffers[0].data != NULLPTR; | |
} | |
/// \brief Return true if the array has a validity bitmap | |
bool HasValidityBitmap() const { return buffers[0].data != NULLPTR; } | |
/// \brief Return true if the validity bitmap may have 0's in it, or if the | |
/// child arrays (in the case of types without a validity bitmap) may have | |
/// nulls, or if the dictionary of dictionay array may have nulls. | |
/// | |
/// \see ArrayData::MayHaveLogicalNulls | |
bool MayHaveLogicalNulls() const { | |
if (buffers[0].data != NULLPTR) { | |
return null_count != 0; | |
} | |
const auto t = type->id(); | |
if (t == Type::SPARSE_UNION || t == Type::DENSE_UNION) { | |
return UnionMayHaveLogicalNulls(); | |
} | |
if (t == Type::RUN_END_ENCODED) { | |
return RunEndEncodedMayHaveLogicalNulls(); | |
} | |
if (t == Type::DICTIONARY) { | |
return DictionaryMayHaveLogicalNulls(); | |
} | |
return null_count != 0; | |
} | |
/// \brief Compute the logical null count for arrays of all types including | |
/// those that do not have a validity bitmap like union and run-end encoded | |
/// arrays | |
/// | |
/// If the array has a validity bitmap, this function behaves the same as | |
/// GetNullCount. For types that have no validity bitmap, this function will | |
/// recompute the logical null count every time it is called. | |
/// | |
/// \see GetNullCount | |
int64_t ComputeLogicalNullCount() const; | |
/// Some DataTypes (StringView, BinaryView) may have an arbitrary number of variadic | |
/// buffers. Since ArraySpan only has 3 buffers, we pack the variadic buffers into | |
/// buffers[2]; IE buffers[2].data points to the first shared_ptr<Buffer> of the | |
/// variadic set and buffers[2].size is the number of variadic buffers times | |
/// sizeof(shared_ptr<Buffer>). | |
/// | |
/// \see HasVariadicBuffers | |
util::span<const std::shared_ptr<Buffer>> GetVariadicBuffers() const; | |
bool HasVariadicBuffers() const; | |
private: | |
ARROW_FRIEND_EXPORT friend bool internal::IsNullRunEndEncoded(const ArrayData& span, | |
int64_t i); | |
bool IsNullSparseUnion(int64_t i) const; | |
bool IsNullDenseUnion(int64_t i) const; | |
/// \brief Return true if the value at logical index i is null | |
/// | |
/// This function uses binary-search, so it has a O(log N) cost. | |
/// Iterating over the whole array and calling IsNull is O(N log N), so | |
/// for better performance it is recommended to use a | |
/// ree_util::RunEndEncodedArraySpan to iterate run by run instead. | |
bool IsNullRunEndEncoded(int64_t i) const; | |
bool UnionMayHaveLogicalNulls() const; | |
bool RunEndEncodedMayHaveLogicalNulls() const; | |
bool DictionaryMayHaveLogicalNulls() const; | |
}; | |
namespace internal { | |
void FillZeroLengthArray(const DataType* type, ArraySpan* span); | |
/// Construct a zero-copy view of this ArrayData with the given type. | |
/// | |
/// This method checks if the types are layout-compatible. | |
/// Nested types are traversed in depth-first order. Data buffers must have | |
/// the same item sizes, even though the logical types may be different. | |
/// An error is returned if the types are not layout-compatible. | |
ARROW_EXPORT | |
Result<std::shared_ptr<ArrayData>> GetArrayView(const std::shared_ptr<ArrayData>& data, | |
const std::shared_ptr<DataType>& type); | |
} // namespace internal | |
} // namespace arrow | |